| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158334663
Identifier: 158334663
GI number: 158334663
Start: 1480341
End: 1481552
Strand: Reverse
Name: 158334663
Synonym: AM1_1495
Alternate gene names: NA
Gene position: 1481552-1480341 (Counterclockwise)
Preceding gene: 158334664
Following gene: 158334659
Centisome position: 22.78
GC content: 45.87
Gene sequence:
>1212_bases ATGCAAGCCAAAACTCAATCACACAGCCTTTGCTCATGGATAGGCCCCGATGCCTACTTTGATTGGTTAGAAAGTTGTAA GTCCCACCAGAAAGATGCCGATTTTGATGTGGTTCTGATTACACATCCTAGGGATGAAGATGATTTACCTCGCATGTTTC CTTGGAGCAAAAACTTAGAGCACCATGAACGGGCCTCTTTAACCAAGCATCTCAAGCCAGCATTTGGTGAGGTGTTGGAA ACCAGATCAGTGCGAGTGGGTATTCTCTTTTTGCCAGTATATGCCCAAGATATTATTCATCCATCCACTCGCTCAGGCAG TCGTAAAATCTTACAAGATGGGCTTAGGCTTGCTGCTCAATCGGGTGCACGTTTTGTTTGTTTAGGTGGACTCACGGGGT CTCTTTCCCTCTATGGTAGAAAGTTAGCAGCACTGGCCCAGGAACTGGGCATTACGTTAACCACGGGGCACTCGGTGACT TCCATTTCTGTCTTAGAAACCTACTTAAGATCGATTCATGATCTGGCGATAGACGTCTCAACCTCGAAAATGGTCGTTCT TGGTGCCGGTAGTGTGGGCGGGGCATTTGCCCGACTTTTACTCCAGCAACCCCTCGTGCCGAGAGAACTCATTCTGGTAG ACAAGCCTTCTCGGGCAGAGCACTTGAATACCCTTTGTAAGTCTCTACAAAAAAATGCAGAAAAGACGAAGATATCTTTT GAATTAACGACACCAAGGGGAGAAGTACCCCCCCATAGTTCTTGTTATGACTGCAAATTCTTAGTCACGGCTGTGAGTTC TTGGCATGTGATTGAGATAGATCACGTTGCCCCCGGAACCATTTTGATCGATGATAGCCAGCCCTACTGTTGGGATCGTG AAAAGGCATGGAACAGATGTCGGACTTATCATGATCTTGCCCCATGTGAGGCAGGCCTGATTGATTGCCATAGCATTGGG TACTTATCACGCTTTCCATTTGATTTTGCTGAACAGGATGAGCATGGTCTATCTAGTACAGCTTGGTCTTGTCTTGCTGA AGGTTTATTACTCTCTCTGAAAAATGAGCTACCCACAACGATTGGGGAGCCCAGTATCCAAAATATTCTCAGTTACTATG AAGCATTTAAGCAGTTTAACTTTCACCCACCCGCTCTGCAATGCGGCCAAAACAAGCTTCCTATTGAGGTTTTAAAGACA GAATTACCCTAA
Upstream 100 bases:
>100_bases ATTGCAAAATTGCCGATGAAATCCTTGGTTATCCAGAGCGTCATTTTGACTTTGGAAGGCAGGGTAAATCATTTAGTCAT TCATACCACGATCAGCTACG
Downstream 100 bases:
>100_bases GCTGGTGACGTTTCTAAAGATTATGGTGCCAAGTTTTTAGCCAATAGCGTCTGGAAAGATTGAATGATGACTTACCCCTG CATATTGAGTCCACAGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NRPS-Type-I PKS Fusion Protein; Amino Acid Adenylation; Amino Acid Adenylation Domain-Containing Protein; Linear Gramicidin Synthetase LgrC
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MQAKTQSHSLCSWIGPDAYFDWLESCKSHQKDADFDVVLITHPRDEDDLPRMFPWSKNLEHHERASLTKHLKPAFGEVLE TRSVRVGILFLPVYAQDIIHPSTRSGSRKILQDGLRLAAQSGARFVCLGGLTGSLSLYGRKLAALAQELGITLTTGHSVT SISVLETYLRSIHDLAIDVSTSKMVVLGAGSVGGAFARLLLQQPLVPRELILVDKPSRAEHLNTLCKSLQKNAEKTKISF ELTTPRGEVPPHSSCYDCKFLVTAVSSWHVIEIDHVAPGTILIDDSQPYCWDREKAWNRCRTYHDLAPCEAGLIDCHSIG YLSRFPFDFAEQDEHGLSSTAWSCLAEGLLLSLKNELPTTIGEPSIQNILSYYEAFKQFNFHPPALQCGQNKLPIEVLKT ELP
Sequences:
>Translated_403_residues MQAKTQSHSLCSWIGPDAYFDWLESCKSHQKDADFDVVLITHPRDEDDLPRMFPWSKNLEHHERASLTKHLKPAFGEVLE TRSVRVGILFLPVYAQDIIHPSTRSGSRKILQDGLRLAAQSGARFVCLGGLTGSLSLYGRKLAALAQELGITLTTGHSVT SISVLETYLRSIHDLAIDVSTSKMVVLGAGSVGGAFARLLLQQPLVPRELILVDKPSRAEHLNTLCKSLQKNAEKTKISF ELTTPRGEVPPHSSCYDCKFLVTAVSSWHVIEIDHVAPGTILIDDSQPYCWDREKAWNRCRTYHDLAPCEAGLIDCHSIG YLSRFPFDFAEQDEHGLSSTAWSCLAEGLLLSLKNELPTTIGEPSIQNILSYYEAFKQFNFHPPALQCGQNKLPIEVLKT ELP >Mature_403_residues MQAKTQSHSLCSWIGPDAYFDWLESCKSHQKDADFDVVLITHPRDEDDLPRMFPWSKNLEHHERASLTKHLKPAFGEVLE TRSVRVGILFLPVYAQDIIHPSTRSGSRKILQDGLRLAAQSGARFVCLGGLTGSLSLYGRKLAALAQELGITLTTGHSVT SISVLETYLRSIHDLAIDVSTSKMVVLGAGSVGGAFARLLLQQPLVPRELILVDKPSRAEHLNTLCKSLQKNAEKTKISF ELTTPRGEVPPHSSCYDCKFLVTAVSSWHVIEIDHVAPGTILIDDSQPYCWDREKAWNRCRTYHDLAPCEAGLIDCHSIG YLSRFPFDFAEQDEHGLSSTAWSCLAEGLLLSLKNELPTTIGEPSIQNILSYYEAFKQFNFHPPALQCGQNKLPIEVLKT ELP
Specific function: Unknown
COG id: COG5322
COG function: function code R; Predicted dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44845; Mature: 44845
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAKTQSHSLCSWIGPDAYFDWLESCKSHQKDADFDVVLITHPRDEDDLPRMFPWSKNLE CCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC HHERASLTKHLKPAFGEVLETRSVRVGILFLPVYAQDIIHPSTRSGSRKILQDGLRLAAQ HHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHH SGARFVCLGGLTGSLSLYGRKLAALAQELGITLTTGHSVTSISVLETYLRSIHDLAIDVS CCCCEEEECCCCCCHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHEEEEC TSKMVVLGAGSVGGAFARLLLQQPLVPRELILVDKPSRAEHLNTLCKSLQKNAEKTKISF CCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCHHHEEEEE ELTTPRGEVPPHSSCYDCKFLVTAVSSWHVIEIDHVAPGTILIDDSQPYCWDREKAWNRC EEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHH RTYHDLAPCEAGLIDCHSIGYLSRFPFDFAEQDEHGLSSTAWSCLAEGLLLSLKNELPTT HHHHHCCCCCCCCCCHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC IGEPSIQNILSYYEAFKQFNFHPPALQCGQNKLPIEVLKTELP CCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHCCCCC >Mature Secondary Structure MQAKTQSHSLCSWIGPDAYFDWLESCKSHQKDADFDVVLITHPRDEDDLPRMFPWSKNLE CCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC HHERASLTKHLKPAFGEVLETRSVRVGILFLPVYAQDIIHPSTRSGSRKILQDGLRLAAQ HHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHH SGARFVCLGGLTGSLSLYGRKLAALAQELGITLTTGHSVTSISVLETYLRSIHDLAIDVS CCCCEEEECCCCCCHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHEEEEC TSKMVVLGAGSVGGAFARLLLQQPLVPRELILVDKPSRAEHLNTLCKSLQKNAEKTKISF CCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCHHHEEEEE ELTTPRGEVPPHSSCYDCKFLVTAVSSWHVIEIDHVAPGTILIDDSQPYCWDREKAWNRC EEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHH RTYHDLAPCEAGLIDCHSIGYLSRFPFDFAEQDEHGLSSTAWSCLAEGLLLSLKNELPTT HHHHHCCCCCCCCCCHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC IGEPSIQNILSYYEAFKQFNFHPPALQCGQNKLPIEVLKTELP CCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA