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The map label for this gene is selD [H]

Identifier: 158334590

GI number: 158334590

Start: 1402636

End: 1404894

Strand: Direct

Name: selD [H]

Synonym: AM1_1417

Alternate gene names: 158334590

Gene position: 1402636-1404894 (Clockwise)

Preceding gene: 158334583

Following gene: 158334595

Centisome position: 21.57

GC content: 49.58

Gene sequence:

>2259_bases
GTGGAGAATCAACGGCCCATTGAAAAAGAGCTAGTGCTGATTGGAGGGGGACATAGCCATGCGATCGCGCTCCGCAACTT
TGCCATGAATCCCTTACCCGGCGTTCGCATCACCCTGATCAGTGAACAGTCTAATACCCCTTACTCAGGTATGTTGCCAG
GACATGTCGCCGGACATTACACCTACGAAGAATGCCATATTGATTTACGACGATTAGCCACTGCAGCTCAAGCCCAACTC
TATGTTGATCGGGCCATCGGTCTCGACTTGGATCGGAATCAGGTTAACTGCGCAGGTCACCCCCCAGTTCGATTTGATAT
TTTGTCCATTGATATTGGCAGCACCCCGGAACTGCCAGATGTGCCTGGGATTTTGGACTACAGCGTTCCGGTTAAACCCT
GGCGATTTTTTCTGCACCAGTGGCAGCAAGTGATAGATCGCGTAAGCCAACACCCCAATCAGCCGATCAGCATTGGAGTC
GTCGGCGGCGGTGCTGGAGGAGTAGAGCTAGTATTGACAATTCAGCACCAATTACAGCAGATTCTTCAAGCAGCAGGGCA
GCCCTTAGCCAATCTGACGATGCATCTGTTTCATCGGGGAGCACGAGTGATGACCGGCCATAACGCCCGGATTCGCAATC
GCTTTCAGCAGATCCTGATTCAGCAAGGTATTCACTTGCACCTGAAAAAAACGGTATTGCAGGTGCAAAAAGGCAAAGTC
TTCTGTGAGTCTGGGTTTCAGGTCGAGTGCGATACCATTTTTTGGGTCACTCGGGCATCTGCACCTATTTGGCCTCAACA
ATCGGGTATCGCTACCGACGAACGAGGCTTTATTCAGGTGCAACCCACCTTACAGTCAGTCTCCCACCCTCACATTTTTG
CCGCCGGGGATATTGCAGCCATGGTAGCGTCTCCTCGCCCTAAGGCTGGGGTATTTGCAGTCCGTCAGGGTAAGCCGTTA
GCCGAAAATTTACGACGGTTGTTGCAAGGTAACAAACTACAAATCTACAAGCCCCAATCTAAGTTTTTGAGTTTGATTAG
CACGGGCGATCGCAAAGCCATTATGTCCTGGGGGGCATTGCCCCTCGGTAATGAGTCGGCCTGGCTCTGGCGCTGGAAAG
ATGCCATTGACCGCAAATTTATGGATCAATTTCGCGAGTTCCTGGAAATGGGACCTGATGTTGAGTTACCTGCAGAAAAC
TCAATTCCAATGCAATGTACTGGCTGTGGATCTAAAGTCGGTAGCCCTATCCTAGAGAAAACCCTATCTCGCTTACACCA
AGACTACCCTCCCCTGCGTCAAGATATTTTGGTGGGCTTAGGGGGGGCAGATGATGCCGCAGTGGTCGAAGTTCCACCTG
GTCAAGTGATGGTCCATACCCTCGATTACTTTCGCAGTCTGATCAATGACCCGTTTATTTTTGGTCAAATTGCGGCCCAT
CATAGTCTGAGCGATCTGTTTGCCATGGGGGCAGAGCCTCAATCAGCCTTAGCCATGGCAACATTGCCCTATGGTTCAGA
TCAGAGCCTCCAAGAAACCCTATATCACCTCCTCGCAGGAGCCACAAAAGTCTTGCAGCAAGCGGGAGCAGAGTTAGTCG
GGGGACACACCACTGAAGGAGCAGAGCTAGCATTTGGGCTAGCCTGTAATGGGTTGATTGATCGCAAGGGCATCCTATCC
AAGCACGGGATTCAACCAGAACAAGTTCTGATACTGACTAAGCCTCTGGGTACAGGCTTAATCTTTGCTGCGGCTATGCG
TCAGCAAACCCGTAATCTCTGGATCGATTCAGCCCTACAGTCCATGTTGCAATCTAACCAAGCAGCCACCCAATGTTTTC
TGGAATACCAAGCGACTGCTTGCACAGATATCACTGGATTTGGACTCATTGGGCACCTATCCGAAATGCTGAGATCTTCG
CCCATCCACGTCCAACTAAACCTAAATTCAATCCCAGCTATGCCGGGAGTAGCCGAAATTATCTCCCAGAACATTCATAG
CTCTCTATACCCTCAAAACTTAAAAGCTGGGCATTGGGTCGCCAATCAAGATCAATTTCAAACTCATCCCCTATGGCCAC
TACTATTTGACCCTCAAACATCTGGAGGCTTATTAGCTACAGTTCCCATGGAACATGCCAGTGAATGTCTAGAAGACTTA
GAAAAAGTTGGATATAGGCAAAGTTCAATAATTGGAAAGACCGTACCTATGCAGCCTCAAACATCCAGCAGTCGACAACA
GCCAATCATCATTCACTAA

Upstream 100 bases:

>100_bases
TCGTATTTTCAGGGAGCTTAATGTTTTTTCAGGTCGATCTCAGGCAACTTGAGGTTGAAGGGAGTACCATCAACACAGCG
ATTTTAGAGTCAGAGTTTTT

Downstream 100 bases:

>100_bases
ACAAAAAAGTTATGAAGTAGCTAACGCCACAGCACACGAACTATTTCAGGTGTTTTCAAGCAATTTACCAGCAGAGGAAG
CTCTCATCAGCTTATCTGTA

Product: selenide, water dikinase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 752; Mature: 752

Protein sequence:

>752_residues
MENQRPIEKELVLIGGGHSHAIALRNFAMNPLPGVRITLISEQSNTPYSGMLPGHVAGHYTYEECHIDLRRLATAAQAQL
YVDRAIGLDLDRNQVNCAGHPPVRFDILSIDIGSTPELPDVPGILDYSVPVKPWRFFLHQWQQVIDRVSQHPNQPISIGV
VGGGAGGVELVLTIQHQLQQILQAAGQPLANLTMHLFHRGARVMTGHNARIRNRFQQILIQQGIHLHLKKTVLQVQKGKV
FCESGFQVECDTIFWVTRASAPIWPQQSGIATDERGFIQVQPTLQSVSHPHIFAAGDIAAMVASPRPKAGVFAVRQGKPL
AENLRRLLQGNKLQIYKPQSKFLSLISTGDRKAIMSWGALPLGNESAWLWRWKDAIDRKFMDQFREFLEMGPDVELPAEN
SIPMQCTGCGSKVGSPILEKTLSRLHQDYPPLRQDILVGLGGADDAAVVEVPPGQVMVHTLDYFRSLINDPFIFGQIAAH
HSLSDLFAMGAEPQSALAMATLPYGSDQSLQETLYHLLAGATKVLQQAGAELVGGHTTEGAELAFGLACNGLIDRKGILS
KHGIQPEQVLILTKPLGTGLIFAAAMRQQTRNLWIDSALQSMLQSNQAATQCFLEYQATACTDITGFGLIGHLSEMLRSS
PIHVQLNLNSIPAMPGVAEIISQNIHSSLYPQNLKAGHWVANQDQFQTHPLWPLLFDPQTSGGLLATVPMEHASECLEDL
EKVGYRQSSIIGKTVPMQPQTSSSRQQPIIIH

Sequences:

>Translated_752_residues
MENQRPIEKELVLIGGGHSHAIALRNFAMNPLPGVRITLISEQSNTPYSGMLPGHVAGHYTYEECHIDLRRLATAAQAQL
YVDRAIGLDLDRNQVNCAGHPPVRFDILSIDIGSTPELPDVPGILDYSVPVKPWRFFLHQWQQVIDRVSQHPNQPISIGV
VGGGAGGVELVLTIQHQLQQILQAAGQPLANLTMHLFHRGARVMTGHNARIRNRFQQILIQQGIHLHLKKTVLQVQKGKV
FCESGFQVECDTIFWVTRASAPIWPQQSGIATDERGFIQVQPTLQSVSHPHIFAAGDIAAMVASPRPKAGVFAVRQGKPL
AENLRRLLQGNKLQIYKPQSKFLSLISTGDRKAIMSWGALPLGNESAWLWRWKDAIDRKFMDQFREFLEMGPDVELPAEN
SIPMQCTGCGSKVGSPILEKTLSRLHQDYPPLRQDILVGLGGADDAAVVEVPPGQVMVHTLDYFRSLINDPFIFGQIAAH
HSLSDLFAMGAEPQSALAMATLPYGSDQSLQETLYHLLAGATKVLQQAGAELVGGHTTEGAELAFGLACNGLIDRKGILS
KHGIQPEQVLILTKPLGTGLIFAAAMRQQTRNLWIDSALQSMLQSNQAATQCFLEYQATACTDITGFGLIGHLSEMLRSS
PIHVQLNLNSIPAMPGVAEIISQNIHSSLYPQNLKAGHWVANQDQFQTHPLWPLLFDPQTSGGLLATVPMEHASECLEDL
EKVGYRQSSIIGKTVPMQPQTSSSRQQPIIIH
>Mature_752_residues
MENQRPIEKELVLIGGGHSHAIALRNFAMNPLPGVRITLISEQSNTPYSGMLPGHVAGHYTYEECHIDLRRLATAAQAQL
YVDRAIGLDLDRNQVNCAGHPPVRFDILSIDIGSTPELPDVPGILDYSVPVKPWRFFLHQWQQVIDRVSQHPNQPISIGV
VGGGAGGVELVLTIQHQLQQILQAAGQPLANLTMHLFHRGARVMTGHNARIRNRFQQILIQQGIHLHLKKTVLQVQKGKV
FCESGFQVECDTIFWVTRASAPIWPQQSGIATDERGFIQVQPTLQSVSHPHIFAAGDIAAMVASPRPKAGVFAVRQGKPL
AENLRRLLQGNKLQIYKPQSKFLSLISTGDRKAIMSWGALPLGNESAWLWRWKDAIDRKFMDQFREFLEMGPDVELPAEN
SIPMQCTGCGSKVGSPILEKTLSRLHQDYPPLRQDILVGLGGADDAAVVEVPPGQVMVHTLDYFRSLINDPFIFGQIAAH
HSLSDLFAMGAEPQSALAMATLPYGSDQSLQETLYHLLAGATKVLQQAGAELVGGHTTEGAELAFGLACNGLIDRKGILS
KHGIQPEQVLILTKPLGTGLIFAAAMRQQTRNLWIDSALQSMLQSNQAATQCFLEYQATACTDITGFGLIGHLSEMLRSS
PIHVQLNLNSIPAMPGVAEIISQNIHSSLYPQNLKAGHWVANQDQFQTHPLWPLLFDPQTSGGLLATVPMEHASECLEDL
EKVGYRQSSIIGKTVPMQPQTSSSRQQPIIIH

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG1252

COG function: function code C; NADH dehydrogenase, FAD-containing subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=352, Percent_Identity=24.7159090909091, Blast_Score=100, Evalue=8e-21,
Organism=Homo sapiens, GI15011844, Length=314, Percent_Identity=24.5222929936306, Blast_Score=80, Evalue=5e-15,
Organism=Escherichia coli, GI1788062, Length=346, Percent_Identity=32.3699421965318, Blast_Score=161, Evalue=2e-40,
Organism=Escherichia coli, GI1787352, Length=220, Percent_Identity=26.3636363636364, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17543426, Length=358, Percent_Identity=25.4189944134078, Blast_Score=105, Evalue=8e-23,
Organism=Drosophila melanogaster, GI24653602, Length=360, Percent_Identity=26.1111111111111, Blast_Score=99, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24653604, Length=360, Percent_Identity=26.1111111111111, Blast_Score=99, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28574119, Length=351, Percent_Identity=25.9259259259259, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI28574118, Length=253, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 82553; Mature: 82553

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENQRPIEKELVLIGGGHSHAIALRNFAMNPLPGVRITLISEQSNTPYSGMLPGHVAGHY
CCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCE
TYEECHIDLRRLATAAQAQLYVDRAIGLDLDRNQVNCAGHPPVRFDILSIDIGSTPELPD
EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCC
VPGILDYSVPVKPWRFFLHQWQQVIDRVSQHPNQPISIGVVGGGAGGVELVLTIQHQLQQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEHHHHHHH
ILQAAGQPLANLTMHLFHRGARVMTGHNARIRNRFQQILIQQGIHLHLKKTVLQVQKGKV
HHHHCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCE
FCESGFQVECDTIFWVTRASAPIWPQQSGIATDERGFIQVQPTLQSVSHPHIFAAGDIAA
EECCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCEEECCCHHH
MVASPRPKAGVFAVRQGKPLAENLRRLLQGNKLQIYKPQSKFLSLISTGDRKAIMSWGAL
HHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCHHHHHCCCC
PLGNESAWLWRWKDAIDRKFMDQFREFLEMGPDVELPAENSIPMQCTGCGSKVGSPILEK
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHCCHHHHH
TLSRLHQDYPPLRQDILVGLGGADDAAVVEVPPGQVMVHTLDYFRSLINDPFIFGQIAAH
HHHHHHHCCCCCCHHHEEECCCCCCCEEEECCCCCEEHHHHHHHHHHHCCCEEEEHHHHH
HSLSDLFAMGAEPQSALAMATLPYGSDQSLQETLYHLLAGATKVLQQAGAELVGGHTTEG
HHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC
AELAFGLACNGLIDRKGILSKHGIQPEQVLILTKPLGTGLIFAAAMRQQTRNLWIDSALQ
CCEEEEEEECCCCCCCCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
SMLQSNQAATQCFLEYQATACTDITGFGLIGHLSEMLRSSPIHVQLNLNSIPAMPGVAEI
HHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHH
ISQNIHSSLYPQNLKAGHWVANQDQFQTHPLWPLLFDPQTSGGLLATVPMEHASECLEDL
HHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCEEEECCCCCCCEEEEECHHHHHHHHHHH
EKVGYRQSSIIGKTVPMQPQTSSSRQQPIIIH
HHCCCCHHHHCCCCCCCCCCCCCCCCCCCEEC
>Mature Secondary Structure
MENQRPIEKELVLIGGGHSHAIALRNFAMNPLPGVRITLISEQSNTPYSGMLPGHVAGHY
CCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCE
TYEECHIDLRRLATAAQAQLYVDRAIGLDLDRNQVNCAGHPPVRFDILSIDIGSTPELPD
EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCC
VPGILDYSVPVKPWRFFLHQWQQVIDRVSQHPNQPISIGVVGGGAGGVELVLTIQHQLQQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEHHHHHHH
ILQAAGQPLANLTMHLFHRGARVMTGHNARIRNRFQQILIQQGIHLHLKKTVLQVQKGKV
HHHHCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCE
FCESGFQVECDTIFWVTRASAPIWPQQSGIATDERGFIQVQPTLQSVSHPHIFAAGDIAA
EECCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCEEECCCHHH
MVASPRPKAGVFAVRQGKPLAENLRRLLQGNKLQIYKPQSKFLSLISTGDRKAIMSWGAL
HHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCHHHHHCCCC
PLGNESAWLWRWKDAIDRKFMDQFREFLEMGPDVELPAENSIPMQCTGCGSKVGSPILEK
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHCCHHHHH
TLSRLHQDYPPLRQDILVGLGGADDAAVVEVPPGQVMVHTLDYFRSLINDPFIFGQIAAH
HHHHHHHCCCCCCHHHEEECCCCCCCEEEECCCCCEEHHHHHHHHHHHCCCEEEEHHHHH
HSLSDLFAMGAEPQSALAMATLPYGSDQSLQETLYHLLAGATKVLQQAGAELVGGHTTEG
HHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC
AELAFGLACNGLIDRKGILSKHGIQPEQVLILTKPLGTGLIFAAAMRQQTRNLWIDSALQ
CCEEEEEEECCCCCCCCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
SMLQSNQAATQCFLEYQATACTDITGFGLIGHLSEMLRSSPIHVQLNLNSIPAMPGVAEI
HHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHH
ISQNIHSSLYPQNLKAGHWVANQDQFQTHPLWPLLFDPQTSGGLLATVPMEHASECLEDL
HHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCEEEECCCCCCCEEEEECHHHHHHHHHHH
EKVGYRQSSIIGKTVPMQPQTSSSRQQPIIIH
HHCCCCHHHHCCCCCCCCCCCCCCCCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA