| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158334583
Identifier: 158334583
GI number: 158334583
Start: 1393958
End: 1394743
Strand: Direct
Name: 158334583
Synonym: AM1_1410
Alternate gene names: NA
Gene position: 1393958-1394743 (Clockwise)
Preceding gene: 158334582
Following gene: 158334590
Centisome position: 21.43
GC content: 48.09
Gene sequence:
>786_bases ATGACCTACTGTTTGGGCGTCATCACCCGTTATGGGCTGATTATGGCAGCCGATTCCCGCACCAATGCAGGGGTTGACTA TGTTTCGACCGCCCAAAAATTATTTGATCTCTCTTGTCCCGGAGAGCGAGTGGTACTCGTCTGTACTGCGGGAAATTTGT CCATGACTCAAAGTGTACTGACGTTAATTCGGCGCGATCGCAAAGCAGGGGTTCAGGGTAATATCAACGAACTCACTACC ATGTACGATATTGCCCACTACTTTGGCGCAAAAACCCGCCAAGTCCTCGAGCAACATCAAGATTGGCTGCAAAAAGACAA CATCAGCGCCAGCTGTAGTTTTTTAGTGGGGGGACAGATTAAGGGGGAATTACCCGAACTCTATATGGTCTATAGTCAAG GCAACTTTCTGCGAGCCACCCGCCATTCACCCTTTTTACAAATTGGGGAAATCAAATATGGGAAACCGATTCTCGATCGC ATCATCAATTATGACGATACATCCCTGGATGCCGCCGCCAAATGTGCCCTGCTCTCCCTAGATTCCACAATGAAATCCAA TATTTCGGTCGGTCCCCCCATCAATATGGCCATGTATGAAGCCGATACCCTGAAAGTCGGATATCGGCTCAAATTGGAGC GCGGGGACCCCTATTTATTGCGCTTACGCAAATCTTGGGAAACCTCTCTCCGCCAAGCGTTCAAGAAGCTACCGAATTTA GCTTGGCATGACAATGAAGACCAAGACCAAGATAATCATCTCGTGATGACAGATATCTTGCCTTAG
Upstream 100 bases:
>100_bases CCATTCTTTGTCAGGGGCAAATTAAAATCATGCCTGTCCAACCTGAAGAATCAGACCTAGACTGAAGGCATACTCTTCCT CACATAAAGGCGAGCACAAC
Downstream 100 bases:
>100_bases GAGTCCTACTGCTTAATCCCTAGGATTTATCGGTAATTTTGAAGGAAGCGAGAAACTTCGTCGCCTTATCGTCAAATGCC TTACCGGTATTTTCACCCAT
Product: A and B-type proteasome family protein
Products: NA
Alternate protein names: Proteasome-Type Protease; 20S Proteasome A/B Subunit; Peptidase T1 Family; Peptidase T1A Family; T1 Family Peptidase; 20S Proteasome Subunits A/B; 20S Proteasome A And Subunit Bs; Proteasome Protease; A And B-Type Proteasome Family Protein; T1A Family Peptidase; Proteasome A-Type And B-Type Family Protein; Proteasome Alpha-1 Subunit; Proteasome-Type Protease-Like Protein; 20S Proteasome A And B Subunit
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MTYCLGVITRYGLIMAADSRTNAGVDYVSTAQKLFDLSCPGERVVLVCTAGNLSMTQSVLTLIRRDRKAGVQGNINELTT MYDIAHYFGAKTRQVLEQHQDWLQKDNISASCSFLVGGQIKGELPELYMVYSQGNFLRATRHSPFLQIGEIKYGKPILDR IINYDDTSLDAAAKCALLSLDSTMKSNISVGPPINMAMYEADTLKVGYRLKLERGDPYLLRLRKSWETSLRQAFKKLPNL AWHDNEDQDQDNHLVMTDILP
Sequences:
>Translated_261_residues MTYCLGVITRYGLIMAADSRTNAGVDYVSTAQKLFDLSCPGERVVLVCTAGNLSMTQSVLTLIRRDRKAGVQGNINELTT MYDIAHYFGAKTRQVLEQHQDWLQKDNISASCSFLVGGQIKGELPELYMVYSQGNFLRATRHSPFLQIGEIKYGKPILDR IINYDDTSLDAAAKCALLSLDSTMKSNISVGPPINMAMYEADTLKVGYRLKLERGDPYLLRLRKSWETSLRQAFKKLPNL AWHDNEDQDQDNHLVMTDILP >Mature_260_residues TYCLGVITRYGLIMAADSRTNAGVDYVSTAQKLFDLSCPGERVVLVCTAGNLSMTQSVLTLIRRDRKAGVQGNINELTTM YDIAHYFGAKTRQVLEQHQDWLQKDNISASCSFLVGGQIKGELPELYMVYSQGNFLRATRHSPFLQIGEIKYGKPILDRI INYDDTSLDAAAKCALLSLDSTMKSNISVGPPINMAMYEADTLKVGYRLKLERGDPYLLRLRKSWETSLRQAFKKLPNLA WHDNEDQDQDNHLVMTDILP
Specific function: Unknown
COG id: COG3484
COG function: function code O; Predicted proteasome-type protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29378; Mature: 29247
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYCLGVITRYGLIMAADSRTNAGVDYVSTAQKLFDLSCPGERVVLVCTAGNLSMTQSVL CHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHH TLIRRDRKAGVQGNINELTTMYDIAHYFGAKTRQVLEQHQDWLQKDNISASCSFLVGGQI HHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC KGELPELYMVYSQGNFLRATRHSPFLQIGEIKYGKPILDRIINYDDTSLDAAAKCALLSL CCCCCEEEEEEECCCEEEECCCCCCEEECCCCCCCHHHHHHCCCCCCCHHHHHHHHHEEC DSTMKSNISVGPPINMAMYEADTLKVGYRLKLERGDPYLLRLRKSWETSLRQAFKKLPNL CHHHHCCCCCCCCCCEEEEECCEEEEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHCCCC AWHDNEDQDQDNHLVMTDILP CCCCCCCCCCCCCEEEEECCC >Mature Secondary Structure TYCLGVITRYGLIMAADSRTNAGVDYVSTAQKLFDLSCPGERVVLVCTAGNLSMTQSVL HHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHH TLIRRDRKAGVQGNINELTTMYDIAHYFGAKTRQVLEQHQDWLQKDNISASCSFLVGGQI HHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC KGELPELYMVYSQGNFLRATRHSPFLQIGEIKYGKPILDRIINYDDTSLDAAAKCALLSL CCCCCEEEEEEECCCEEEECCCCCCEEECCCCCCCHHHHHHCCCCCCCHHHHHHHHHEEC DSTMKSNISVGPPINMAMYEADTLKVGYRLKLERGDPYLLRLRKSWETSLRQAFKKLPNL CHHHHCCCCCCCCCCEEEEECCEEEEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHCCCC AWHDNEDQDQDNHLVMTDILP CCCCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA