| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is abgA [C]
Identifier: 158334581
GI number: 158334581
Start: 1391932
End: 1393110
Strand: Direct
Name: abgA [C]
Synonym: AM1_1408
Alternate gene names: 158334581
Gene position: 1391932-1393110 (Clockwise)
Preceding gene: 158334576
Following gene: 158334582
Centisome position: 21.4
GC content: 53.52
Gene sequence:
>1179_bases ATGTCGACTCGAATCAAACAGCTTGCTGAAACACTCTCTCCTCGACTGATTGAGATTCGGCGTCATCTGCACAGTTACCC CGAGTTAAGTGGTCAAGAATATCAAACGTCTGCTTATGTTGCCGGCATTCTGTCTTCCTATGGGTTACATGTACGGGAGG GAGTGGGAAAAACAGGGGTGATCGGTGAATTAAAGGGAGAAGGAGACGATGCTCGTCAGCTCGCGATTCGCACAGACATG GATGCTCTGCCCATCCAAGAAATGACTCAGCTAGAGTTCGCTTCTCGTAAACAGGGGGTGATGCATGCCTGCGGCCATGA TATTCACACCACGATCGGTTTAGGCACCGCCATGGTGCTGTCGGCCATGCAGGATGAGATTCCGGGTAAACTTCGCTTCC TGTTCCAACCCGCTGAGGAAATTGCTCAAGGGGCGGGTTGGATGGTGGCAGATGGCGCCATGGATGAAGTCGATGCGATT TTGTCCGTGCATGTATTACCCAGTATTCCTGCGGGGTCAGTGGCGGTGCGCTATGGGGCACTGACCGCTGCCGCCGACAA TTTAGAAATTACGATTATGGGAGAAGCAGGTCACGGTGCACGCCCCCATGAAGCGGTGGATGCGATTTGGATTGCCGCCC AGGTGATCACCACCCTACAGCAAGCCATTAGCCGCACCCAAAATCCTTTACGTCCGGTGGTGTTGACCATTGGCCAAATG AAGGGAGGACGGGCTCCGAATGTCATTGCAGATCAGGTCCAAATGCAGGGGACCGTTCGATCCCTACATCCAGAAACACG CGCTCAACTCCCCCAATGGATTGAAGAGATTGTGGCCAGCGTTTGCCGCCCCTATGGTGCCCGCTACCATGTCGATTATC AGGCGGGGGTGCCTTCGGTACACAATACGGCCAGCTTGACCCAGTTAATCGAAACTGCCGCCCAAGGTGTTTGCGGTAGC GAAAATGTACGCATCCTTACAGAGCCATCTTTAGGCGCAGAAGATTTCTCCCTCTATTTAGAACATGCCCCTGGCGCCAT GTTTCGTTTGGGGGTGGGGAAGGTCGATCAGGTCAATCCTCCCCTCCATCATCCTCAGTTTGAAGCCCAAGAATCTGCTA TTGTCACAGGGGTAATGACGATGGCCAATGCTGCCCTGAACTATTGGCAGCAGGCCTAA
Upstream 100 bases:
>100_bases GCAAAACGGTTGAGAGATTGATACCCACATTGAACATAATCTACAGGAATAAGTATCAACCGCTAGCATAAAGTATGGAT AGCGAAATCAAAGGGTTTGC
Downstream 100 bases:
>100_bases GACTGGAGATTGGAGTGGAAACAGAAGAACAACTTGCCCCCCAGCGAAAGGGTCGCCTGATTTCACGGGTTCTCACCCCA GCGATCAAATTGTGGTTGCG
Product: N-acetyl-L-amino acid amidohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MSTRIKQLAETLSPRLIEIRRHLHSYPELSGQEYQTSAYVAGILSSYGLHVREGVGKTGVIGELKGEGDDARQLAIRTDM DALPIQEMTQLEFASRKQGVMHACGHDIHTTIGLGTAMVLSAMQDEIPGKLRFLFQPAEEIAQGAGWMVADGAMDEVDAI LSVHVLPSIPAGSVAVRYGALTAAADNLEITIMGEAGHGARPHEAVDAIWIAAQVITTLQQAISRTQNPLRPVVLTIGQM KGGRAPNVIADQVQMQGTVRSLHPETRAQLPQWIEEIVASVCRPYGARYHVDYQAGVPSVHNTASLTQLIETAAQGVCGS ENVRILTEPSLGAEDFSLYLEHAPGAMFRLGVGKVDQVNPPLHHPQFEAQESAIVTGVMTMANAALNYWQQA
Sequences:
>Translated_392_residues MSTRIKQLAETLSPRLIEIRRHLHSYPELSGQEYQTSAYVAGILSSYGLHVREGVGKTGVIGELKGEGDDARQLAIRTDM DALPIQEMTQLEFASRKQGVMHACGHDIHTTIGLGTAMVLSAMQDEIPGKLRFLFQPAEEIAQGAGWMVADGAMDEVDAI LSVHVLPSIPAGSVAVRYGALTAAADNLEITIMGEAGHGARPHEAVDAIWIAAQVITTLQQAISRTQNPLRPVVLTIGQM KGGRAPNVIADQVQMQGTVRSLHPETRAQLPQWIEEIVASVCRPYGARYHVDYQAGVPSVHNTASLTQLIETAAQGVCGS ENVRILTEPSLGAEDFSLYLEHAPGAMFRLGVGKVDQVNPPLHHPQFEAQESAIVTGVMTMANAALNYWQQA >Mature_391_residues STRIKQLAETLSPRLIEIRRHLHSYPELSGQEYQTSAYVAGILSSYGLHVREGVGKTGVIGELKGEGDDARQLAIRTDMD ALPIQEMTQLEFASRKQGVMHACGHDIHTTIGLGTAMVLSAMQDEIPGKLRFLFQPAEEIAQGAGWMVADGAMDEVDAIL SVHVLPSIPAGSVAVRYGALTAAADNLEITIMGEAGHGARPHEAVDAIWIAAQVITTLQQAISRTQNPLRPVVLTIGQMK GGRAPNVIADQVQMQGTVRSLHPETRAQLPQWIEEIVASVCRPYGARYHVDYQAGVPSVHNTASLTQLIETAAQGVCGSE NVRILTEPSLGAEDFSLYLEHAPGAMFRLGVGKVDQVNPPLHHPQFEAQESAIVTGVMTMANAALNYWQQA
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=434, Percent_Identity=26.2672811059908, Blast_Score=102, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: NA
Molecular weight: Translated: 42270; Mature: 42139
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRIKQLAETLSPRLIEIRRHLHSYPELSGQEYQTSAYVAGILSSYGLHVREGVGKTGV CCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCC IGELKGEGDDARQLAIRTDMDALPIQEMTQLEFASRKQGVMHACGHDIHTTIGLGTAMVL EEECCCCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHH SAMQDEIPGKLRFLFQPAEEIAQGAGWMVADGAMDEVDAILSVHVLPSIPAGSVAVRYGA HHHHHHCCCCEEEEECCHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEHHH LTAAADNLEITIMGEAGHGARPHEAVDAIWIAAQVITTLQQAISRTQNPLRPVVLTIGQM HEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEECC KGGRAPNVIADQVQMQGTVRSLHPETRAQLPQWIEEIVASVCRPYGARYHVDYQAGVPSV CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC HNTASLTQLIETAAQGVCGSENVRILTEPSLGAEDFSLYLEHAPGAMFRLGVGKVDQVNP CCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHEECCCCCEEEECCCCCCCCCC PLHHPQFEAQESAIVTGVMTMANAALNYWQQA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STRIKQLAETLSPRLIEIRRHLHSYPELSGQEYQTSAYVAGILSSYGLHVREGVGKTGV CHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCC IGELKGEGDDARQLAIRTDMDALPIQEMTQLEFASRKQGVMHACGHDIHTTIGLGTAMVL EEECCCCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHH SAMQDEIPGKLRFLFQPAEEIAQGAGWMVADGAMDEVDAILSVHVLPSIPAGSVAVRYGA HHHHHHCCCCEEEEECCHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEHHH LTAAADNLEITIMGEAGHGARPHEAVDAIWIAAQVITTLQQAISRTQNPLRPVVLTIGQM HEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEECC KGGRAPNVIADQVQMQGTVRSLHPETRAQLPQWIEEIVASVCRPYGARYHVDYQAGVPSV CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC HNTASLTQLIETAAQGVCGSENVRILTEPSLGAEDFSLYLEHAPGAMFRLGVGKVDQVNP CCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHEECCCCCEEEECCCCCCCCCC PLHHPQFEAQESAIVTGVMTMANAALNYWQQA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]