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The map label for this gene is exeD [H]

Identifier: 158334571

GI number: 158334571

Start: 1378043

End: 1380091

Strand: Direct

Name: exeD [H]

Synonym: AM1_1398

Alternate gene names: 158334571

Gene position: 1378043-1380091 (Clockwise)

Preceding gene: 158334570

Following gene: 158334576

Centisome position: 21.19

GC content: 44.66

Gene sequence:

>2049_bases
GTGAACTCGTATCAAGGAAAACCCGGAATTATTATAGGCTGCACTGCAGCTGCACTAGGCGCAATGATTCAGCCAGTATG
GGCTGCTGAAACTGAAGTCACCAATGTTCAACTCAATCCCACCTCAAAGGGATTTGAACTCGTACTCGGAACTCAAGGTG
ATAACCGCCCTCCCATTTTTACGGTCAATCGAGGCAATACATCCGTTTCAGACGTCAGCAATTCTCTCTTACGGCTACCA
GAGGCAGGCCCATTTCAACAGAAAGATCCGGCTCCTGGCATTAAATTCGTTGAAGTTCGACAATTAGATCCTGATACGGT
CAGAATTACAGTAGAAGGAGTCCATTCTGCTCCTATTGCCGAAACGATTCGCAACGACAATCGGGATGGTGTTTTAGCCA
TTAAATTTGATGGTGCGCCTGGTAGTACGGATTCAGTCGCAACATCGTCTCAGCCCTCCAATCTTCGCTCTCGAGCTAGT
GCTGTCCCTCCCTTTAGAAGTCGGGCAAAGGCTCCACCTGTTGGAGATATAGCAATTGCCCCATTGAATGTTGAGCCTGA
ACGCATCGATCTTGGCAGCGATCAAATCATTCCTAAGTTGTTGCTACGTGAAGCCCCTGTTCGTGAGGTATTAACACTCT
TGGGCCGTGCCGCTAATGTGAACGTCGCTTTCGCGGAAGATGGAGGAGACGGAGAAGAAGGAGCTTCCGCCTCATCTACC
ATCACATTAGACATCGAGAATGAATCTGTTGATGATGTCTTTAACTACGTCTTACGCTTATCTGGGATGCAAGCTAACCG
GGTCGGTCAAACGGTCTTTGTCGGCAAAACGCTACCAGGTGATGCCCAAAACCGGGTTGTGAGAACAATTCGTCTGAATC
AACTTAAGGCAACAGCGAAGATCACAAGATCAAGTTCATTCACCAATGAAGCAGAAACTGGAGCCAATATCACACCTACT
GGTGCCGATAATGACGCTTCTACTCCTCAAACAGGTATAAAACGAGAAAATTCTGTTAAGGAAGAGATTGAATCACTAGG
AGCAAAAGAACTCCTTGAGAATTATGGTGCCAATGGTGGCAGCTCAGAAGGAAGTAGCGCTAGCTTATTGGAAGGTTTGG
AAGTCGTTGCTGATGCCCGGACTAATACCATCACCCTAATCGGGACTCCCCGAAAAGTGGAAACAGCAACAGCCCTGCTG
ACAAGAATGGATGTGCGTCAGCGTCAGGTAGCTATTAATGTCAAATTTATTGATGTCAATTTGCTGAAAGGTAAACTTTC
CAACGCAGATCTACAGTTTAGAGCTAATGACTCCTTAGGGATTGGTTTTAGACCAGATGCTAATGGCAGAGGTGGCTTAA
CTTCAATCTTTGGATCAGGCACTGTTCCTATTGTAGGTAGCGGCTTGTTCACCTTAACTGAAACCTTTTTAGGTAATTTG
TTTGTATCAATACAAAATAATGATGCCAAAATCCTAACGAACCCAACTTTATTAGTACAAGAAGGTAGTTCAGCTCAGGT
CAATCTAACTGAGCAAGTTTTCACAGGCTTTGTACAAAGAGTTTCAAGTTCAGGAAGTACAGCAGGTGCCACTACTGATT
CAACTAGTACTGAACCCAACATTCAAAATGCAGGAGTTATTCTAAACGTTGTAGTAGATCACATTGATGACAATGGGTTT
GTGACGTTGAATCTATCACCGGAAGTCAGCTCTCTATCAGGGAGAACTTTTGTTGATGCTCTATCAGGAGATACCGCTTT
CCTCTTACAGCAACGCCGAGTTGAAACAGGAAAAGTTCGTTTGCGAGATGGTCAAACAATAGTATTAACTGGAATCATTC
AAGATCAAGATAGAGTTGATGTTAGCAAAGTGCCTATCTTAGGGGATATCCCATTATTGGGTCGGCTCTTCCGACGTGAA
AATAAAACTAGACAGAGAAGTGAATTAGTTGTGCTAGTGACTCCGCAGATTGTGGATGATTCGGATCAAACCACTTATGG
TTATCGCTATACACCCGGCGAAGAATCCCAAAAGCTTCTGAATCCCTAG

Upstream 100 bases:

>100_bases
AAATGCAATAGATTCATTTAATCGCTACCGCCTAAGCTGCAACCTGCAGCTACATCTACAACGAACAGTCATCATTAATT
ATTAAATAGAGGAGTGTAGG

Downstream 100 bases:

>100_bases
TTCGCACTAAGAATCATAAAAGTACCCCTCATCTTGAAGCAAGATGAGGGGTACTTTATATGGAATATAAAAAATATTTG
GAATTAGGCTGTAACTAATT

Product: secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 682; Mature: 682

Protein sequence:

>682_residues
MNSYQGKPGIIIGCTAAALGAMIQPVWAAETEVTNVQLNPTSKGFELVLGTQGDNRPPIFTVNRGNTSVSDVSNSLLRLP
EAGPFQQKDPAPGIKFVEVRQLDPDTVRITVEGVHSAPIAETIRNDNRDGVLAIKFDGAPGSTDSVATSSQPSNLRSRAS
AVPPFRSRAKAPPVGDIAIAPLNVEPERIDLGSDQIIPKLLLREAPVREVLTLLGRAANVNVAFAEDGGDGEEGASASST
ITLDIENESVDDVFNYVLRLSGMQANRVGQTVFVGKTLPGDAQNRVVRTIRLNQLKATAKITRSSSFTNEAETGANITPT
GADNDASTPQTGIKRENSVKEEIESLGAKELLENYGANGGSSEGSSASLLEGLEVVADARTNTITLIGTPRKVETATALL
TRMDVRQRQVAINVKFIDVNLLKGKLSNADLQFRANDSLGIGFRPDANGRGGLTSIFGSGTVPIVGSGLFTLTETFLGNL
FVSIQNNDAKILTNPTLLVQEGSSAQVNLTEQVFTGFVQRVSSSGSTAGATTDSTSTEPNIQNAGVILNVVVDHIDDNGF
VTLNLSPEVSSLSGRTFVDALSGDTAFLLQQRRVETGKVRLRDGQTIVLTGIIQDQDRVDVSKVPILGDIPLLGRLFRRE
NKTRQRSELVVLVTPQIVDDSDQTTYGYRYTPGEESQKLLNP

Sequences:

>Translated_682_residues
MNSYQGKPGIIIGCTAAALGAMIQPVWAAETEVTNVQLNPTSKGFELVLGTQGDNRPPIFTVNRGNTSVSDVSNSLLRLP
EAGPFQQKDPAPGIKFVEVRQLDPDTVRITVEGVHSAPIAETIRNDNRDGVLAIKFDGAPGSTDSVATSSQPSNLRSRAS
AVPPFRSRAKAPPVGDIAIAPLNVEPERIDLGSDQIIPKLLLREAPVREVLTLLGRAANVNVAFAEDGGDGEEGASASST
ITLDIENESVDDVFNYVLRLSGMQANRVGQTVFVGKTLPGDAQNRVVRTIRLNQLKATAKITRSSSFTNEAETGANITPT
GADNDASTPQTGIKRENSVKEEIESLGAKELLENYGANGGSSEGSSASLLEGLEVVADARTNTITLIGTPRKVETATALL
TRMDVRQRQVAINVKFIDVNLLKGKLSNADLQFRANDSLGIGFRPDANGRGGLTSIFGSGTVPIVGSGLFTLTETFLGNL
FVSIQNNDAKILTNPTLLVQEGSSAQVNLTEQVFTGFVQRVSSSGSTAGATTDSTSTEPNIQNAGVILNVVVDHIDDNGF
VTLNLSPEVSSLSGRTFVDALSGDTAFLLQQRRVETGKVRLRDGQTIVLTGIIQDQDRVDVSKVPILGDIPLLGRLFRRE
NKTRQRSELVVLVTPQIVDDSDQTTYGYRYTPGEESQKLLNP
>Mature_682_residues
MNSYQGKPGIIIGCTAAALGAMIQPVWAAETEVTNVQLNPTSKGFELVLGTQGDNRPPIFTVNRGNTSVSDVSNSLLRLP
EAGPFQQKDPAPGIKFVEVRQLDPDTVRITVEGVHSAPIAETIRNDNRDGVLAIKFDGAPGSTDSVATSSQPSNLRSRAS
AVPPFRSRAKAPPVGDIAIAPLNVEPERIDLGSDQIIPKLLLREAPVREVLTLLGRAANVNVAFAEDGGDGEEGASASST
ITLDIENESVDDVFNYVLRLSGMQANRVGQTVFVGKTLPGDAQNRVVRTIRLNQLKATAKITRSSSFTNEAETGANITPT
GADNDASTPQTGIKRENSVKEEIESLGAKELLENYGANGGSSEGSSASLLEGLEVVADARTNTITLIGTPRKVETATALL
TRMDVRQRQVAINVKFIDVNLLKGKLSNADLQFRANDSLGIGFRPDANGRGGLTSIFGSGTVPIVGSGLFTLTETFLGNL
FVSIQNNDAKILTNPTLLVQEGSSAQVNLTEQVFTGFVQRVSSSGSTAGATTDSTSTEPNIQNAGVILNVVVDHIDDNGF
VTLNLSPEVSSLSGRTFVDALSGDTAFLLQQRRVETGKVRLRDGQTIVLTGIIQDQDRVDVSKVPILGDIPLLGRLFRRE
NKTRQRSELVVLVTPQIVDDSDQTTYGYRYTPGEESQKLLNP

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG4796

COG function: function code U; Type II secretory pathway, component HofQ

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI87082242, Length=349, Percent_Identity=25.5014326647564, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR013356
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 72668; Mature: 72668

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSYQGKPGIIIGCTAAALGAMIQPVWAAETEVTNVQLNPTSKGFELVLGTQGDNRPPIF
CCCCCCCCCEEEEEHHHHHHHHHCCHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEE
TVNRGNTSVSDVSNSLLRLPEAGPFQQKDPAPGIKFVEVRQLDPDTVRITVEGVHSAPIA
EEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCHH
ETIRNDNRDGVLAIKFDGAPGSTDSVATSSQPSNLRSRASAVPPFRSRAKAPPVGDIAIA
HHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCEEEE
PLNVEPERIDLGSDQIIPKLLLREAPVREVLTLLGRAANVNVAFAEDGGDGEEGASASST
ECCCCCCEEECCCCHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCE
ITLDIENESVDDVFNYVLRLSGMQANRVGQTVFVGKTLPGDAQNRVVRTIRLNQLKATAK
EEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHEEEEEEHHHHHHHHE
ITRSSSFTNEAETGANITPTGADNDASTPQTGIKRENSVKEEIESLGAKELLENYGANGG
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCC
SSEGSSASLLEGLEVVADARTNTITLIGTPRKVETATALLTRMDVRQRQVAINVKFIDVN
CCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEEEEEEE
LLKGKLSNADLQFRANDSLGIGFRPDANGRGGLTSIFGSGTVPIVGSGLFTLTETFLGNL
EEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCEEECCCHHHHHHHHHCEE
FVSIQNNDAKILTNPTLLVQEGSSAQVNLTEQVFTGFVQRVSSSGSTAGATTDSTSTEPN
EEEEECCCCEEEECCEEEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
IQNAGVILNVVVDHIDDNGFVTLNLSPEVSSLSGRTFVDALSGDTAFLLQQRRVETGKVR
CCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCEEEECCCCCCEEEHHHHCCCCCEEE
LRDGQTIVLTGIIQDQDRVDVSKVPILGDIPLLGRLFRRENKTRQRSELVVLVTPQIVDD
EECCCEEEEEEEECCCCCCCHHHCCEEECCHHHHHHHHHHCCCCCCCCEEEEECCCEECC
SDQTTYGYRYTPGEESQKLLNP
CCCCEECEEECCCCHHHHCCCC
>Mature Secondary Structure
MNSYQGKPGIIIGCTAAALGAMIQPVWAAETEVTNVQLNPTSKGFELVLGTQGDNRPPIF
CCCCCCCCCEEEEEHHHHHHHHHCCHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEE
TVNRGNTSVSDVSNSLLRLPEAGPFQQKDPAPGIKFVEVRQLDPDTVRITVEGVHSAPIA
EEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCHH
ETIRNDNRDGVLAIKFDGAPGSTDSVATSSQPSNLRSRASAVPPFRSRAKAPPVGDIAIA
HHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCEEEE
PLNVEPERIDLGSDQIIPKLLLREAPVREVLTLLGRAANVNVAFAEDGGDGEEGASASST
ECCCCCCEEECCCCHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCE
ITLDIENESVDDVFNYVLRLSGMQANRVGQTVFVGKTLPGDAQNRVVRTIRLNQLKATAK
EEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHEEEEEEHHHHHHHHE
ITRSSSFTNEAETGANITPTGADNDASTPQTGIKRENSVKEEIESLGAKELLENYGANGG
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCC
SSEGSSASLLEGLEVVADARTNTITLIGTPRKVETATALLTRMDVRQRQVAINVKFIDVN
CCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEEEEEEE
LLKGKLSNADLQFRANDSLGIGFRPDANGRGGLTSIFGSGTVPIVGSGLFTLTETFLGNL
EEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCEEECCCHHHHHHHHHCEE
FVSIQNNDAKILTNPTLLVQEGSSAQVNLTEQVFTGFVQRVSSSGSTAGATTDSTSTEPN
EEEEECCCCEEEECCEEEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
IQNAGVILNVVVDHIDDNGFVTLNLSPEVSSLSGRTFVDALSGDTAFLLQQRRVETGKVR
CCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCEEEECCCCCCEEEHHHHCCCCCEEE
LRDGQTIVLTGIIQDQDRVDVSKVPILGDIPLLGRLFRRENKTRQRSELVVLVTPQIVDD
EECCCEEEEEEEECCCCCCCHHHCCEEECCHHHHHHHHHHCCCCCCCCEEEEECCCEECC
SDQTTYGYRYTPGEESQKLLNP
CCCCEECEEECCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1640836 [H]