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The map label for this gene is rcsC [C]

Identifier: 158334288

GI number: 158334288

Start: 1083203

End: 1084384

Strand: Reverse

Name: rcsC [C]

Synonym: AM1_1107

Alternate gene names: 158334288

Gene position: 1084384-1083203 (Counterclockwise)

Preceding gene: 158334289

Following gene: 158334287

Centisome position: 16.67

GC content: 46.87

Gene sequence:

>1182_bases
ATGCAGACTTTAGAACAAACTCAGCAATTTTCTTTTCAGTCCCAAGAACTTCCAACTAAATTACTGGACCCCTCATTGAT
GAACGGTGATGGACATTGGAAGATACAGTTCTCTCGCTTGGCGAACCGAAAAGAGAATACCTTTGGTTACCTGGGTATTA
CAGATGTGGGGACCATCAGCTACTCCGGCTATCGTCCTTGGACTAATCATGAGCTTCTACAAGCCGCCAAGCGCTATATT
TTACAGACCCGCCAGGAATCCCTTAAGCCTCATGTTGCCCGTTGGCAGGCTGCTCTCAAGGACCAAACGATCACTGCAAA
AGCCATTTACGAGCATATGCTGCAGCTGGGGATTATGCCTGAACAGGTTCAGCAAGCCTTGAGATTGAAGATGCTCAATG
ACTTTGATGCATTTCTAACCCTCGGAGGGGGAGAAGCGTCTTTCATCCCCAGTGCGCAACTGCGGGATATCATTCCAGTC
CCAGGCATCCCCATCGCTGAACTATTAGACGAATCTCAGAAACGACTCGTCTTATGGCAACAGCTGCGACCGATTATCCC
TTCGATGAATATGTTGCCGGTGCTAGATCCTCAGGTTCTTGACGCGGCTAATTTACCGCAATCCCAGCGACAGTGGATCG
AAAAGATTGTTCAGCACCAGCGTCCTTTGAGCAAGATTGCGATTGGCCTAGCGAAAGATCCTTTGGAAGTTGCGCGTCTC
TTTGCAAAATGGGTGCGGGCAGAATTGCTGCATTTAGAGCCTCTGCAACAGACTCAATCGACTAAAGTCATGATTATCGA
TGACTCCCCTCTAGTCCTTAAGCAATTTCACAGTCTGGTGGGAGCGCTGGGGTATCAGGTGGAAGTCTGTCAGCAAGCTG
AAACTGCCTTAGAACAAATTGATCAAGTAAAACCTGGCATCGTTTTTATTGATATTAATATGCCAGGGATTACGGGTTTT
GAATTGGTAAAGAAAATTCGGCAACAGCCAAATTTAGCGGCCATTCCCCTGGTGATCTTAACGGGAGAACAAAAGCTATC
CAATAAATGGCGGGCCCAATGGAGCGGTTGCGAGTTCCTAACCAAACCCCTCGCAGCAACTGAGATCAATCAATTTCAAC
TACAGTTGCAAGAATTGATCCACACATTAGTTTTTGGTCCATCTATGATTTCAGGTGCTTAG

Upstream 100 bases:

>100_bases
TCAGAAGGACATTCTCTAAGTTGAATGTAATATTCAACTTAAAGTGTGATTTCATCCAAGATCTTTTGGTTGTCAATGAT
CTTGTTGCAGAACCACTAAA

Downstream 100 bases:

>100_bases
AAATACGCTGCCTCACACAGCAATTTGTTGATAAAGCAAGTTTTTTGGAGTTTGAAAAATGCGTTTACTAGTCATTGATG
ACAGTGCAGTCGATCGATTG

Product: response regulator

Products: NA

Alternate protein names: Two-Component Response Regulator; Response Regulator; Two Component LuxR Family Transcriptional Regulator; Response Regulator Receiver Domain Protein; Response Regulator Receiver Modulated Diguanylate Cyclase; Two Component Transcriptional Regulator LuxR Family; Response Regulator Receiver; Twitching Motility Regulator PilG; Two-Component Hybrid Sensor And Regulator; LuxR Family Transcriptional Regulator; Two Component System Response Regulator; Two-Component System Regulatory Protein; Response Regulator Receiver Domain-Containing Protein; Response Regulator Receiver Modulated Serine Phosphatase; Regulatory Components Of Sensory Transduction System; Component Of Chemotactic Signal Transduction System; NMT1/THI5 Like Family; Two Component Response Regulator LuxR; PAS Fold Family; Hybrid Sensory Kinase; Polar Differentiation Response Regulator; Response Regulator PleD; Sensory Box Sensor Histidine Kinase/Response Regulator; Two-Component Transcriptional Regulatory Protein

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MQTLEQTQQFSFQSQELPTKLLDPSLMNGDGHWKIQFSRLANRKENTFGYLGITDVGTISYSGYRPWTNHELLQAAKRYI
LQTRQESLKPHVARWQAALKDQTITAKAIYEHMLQLGIMPEQVQQALRLKMLNDFDAFLTLGGGEASFIPSAQLRDIIPV
PGIPIAELLDESQKRLVLWQQLRPIIPSMNMLPVLDPQVLDAANLPQSQRQWIEKIVQHQRPLSKIAIGLAKDPLEVARL
FAKWVRAELLHLEPLQQTQSTKVMIIDDSPLVLKQFHSLVGALGYQVEVCQQAETALEQIDQVKPGIVFIDINMPGITGF
ELVKKIRQQPNLAAIPLVILTGEQKLSNKWRAQWSGCEFLTKPLAATEINQFQLQLQELIHTLVFGPSMISGA

Sequences:

>Translated_393_residues
MQTLEQTQQFSFQSQELPTKLLDPSLMNGDGHWKIQFSRLANRKENTFGYLGITDVGTISYSGYRPWTNHELLQAAKRYI
LQTRQESLKPHVARWQAALKDQTITAKAIYEHMLQLGIMPEQVQQALRLKMLNDFDAFLTLGGGEASFIPSAQLRDIIPV
PGIPIAELLDESQKRLVLWQQLRPIIPSMNMLPVLDPQVLDAANLPQSQRQWIEKIVQHQRPLSKIAIGLAKDPLEVARL
FAKWVRAELLHLEPLQQTQSTKVMIIDDSPLVLKQFHSLVGALGYQVEVCQQAETALEQIDQVKPGIVFIDINMPGITGF
ELVKKIRQQPNLAAIPLVILTGEQKLSNKWRAQWSGCEFLTKPLAATEINQFQLQLQELIHTLVFGPSMISGA
>Mature_393_residues
MQTLEQTQQFSFQSQELPTKLLDPSLMNGDGHWKIQFSRLANRKENTFGYLGITDVGTISYSGYRPWTNHELLQAAKRYI
LQTRQESLKPHVARWQAALKDQTITAKAIYEHMLQLGIMPEQVQQALRLKMLNDFDAFLTLGGGEASFIPSAQLRDIIPV
PGIPIAELLDESQKRLVLWQQLRPIIPSMNMLPVLDPQVLDAANLPQSQRQWIEKIVQHQRPLSKIAIGLAKDPLEVARL
FAKWVRAELLHLEPLQQTQSTKVMIIDDSPLVLKQFHSLVGALGYQVEVCQQAETALEQIDQVKPGIVFIDINMPGITGF
ELVKKIRQQPNLAAIPLVILTGEQKLSNKWRAQWSGCEFLTKPLAATEINQFQLQLQELIHTLVFGPSMISGA

Specific function: Member Of The Two-Component Regulatory System rcsC/rcsB Involved In The Regulation Of The Expression Of Genes Involved In Colanic Acid Capsule Synthesis. rcsC Probably Functions As A Membrane-Associated Protein Kinase That Phosphorylates rcsB In Response

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.3.- [C]

Molecular weight: Translated: 44426; Mature: 44426

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLEQTQQFSFQSQELPTKLLDPSLMNGDGHWKIQFSRLANRKENTFGYLGITDVGTIS
CCCHHHHHHHCCCHHHCCHHHCCCCCCCCCCCEEEEHHHHCCCCCCCEEEEEECCCCEEE
YSGYRPWTNHELLQAAKRYILQTRQESLKPHVARWQAALKDQTITAKAIYEHMLQLGIMP
ECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCH
EQVQQALRLKMLNDFDAFLTLGGGEASFIPSAQLRDIIPVPGIPIAELLDESQKRLVLWQ
HHHHHHHHHHHHHCCHHHEEECCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
QLRPIIPSMNMLPVLDPQVLDAANLPQSQRQWIEKIVQHQRPLSKIAIGLAKDPLEVARL
HHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHH
FAKWVRAELLHLEPLQQTQSTKVMIIDDSPLVLKQFHSLVGALGYQVEVCQQAETALEQI
HHHHHHHHHHHCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
DQVKPGIVFIDINMPGITGFELVKKIRQQPNLAAIPLVILTGEQKLSNKWRAQWSGCEFL
HHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHCCCCHHHH
TKPLAATEINQFQLQLQELIHTLVFGPSMISGA
HCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MQTLEQTQQFSFQSQELPTKLLDPSLMNGDGHWKIQFSRLANRKENTFGYLGITDVGTIS
CCCHHHHHHHCCCHHHCCHHHCCCCCCCCCCCEEEEHHHHCCCCCCCEEEEEECCCCEEE
YSGYRPWTNHELLQAAKRYILQTRQESLKPHVARWQAALKDQTITAKAIYEHMLQLGIMP
ECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCH
EQVQQALRLKMLNDFDAFLTLGGGEASFIPSAQLRDIIPVPGIPIAELLDESQKRLVLWQ
HHHHHHHHHHHHHCCHHHEEECCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
QLRPIIPSMNMLPVLDPQVLDAANLPQSQRQWIEKIVQHQRPLSKIAIGLAKDPLEVARL
HHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHH
FAKWVRAELLHLEPLQQTQSTKVMIIDDSPLVLKQFHSLVGALGYQVEVCQQAETALEQI
HHHHHHHHHHHCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
DQVKPGIVFIDINMPGITGFELVKKIRQQPNLAAIPLVILTGEQKLSNKWRAQWSGCEFL
HHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHCCCCHHHH
TKPLAATEINQFQLQLQELIHTLVFGPSMISGA
HCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Phosphotransferases with a nitrogenous group as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA