Click here to switch to the map view.

The map label for this gene is pilH [H]

Identifier: 158334287

GI number: 158334287

Start: 1082782

End: 1083144

Strand: Reverse

Name: pilH [H]

Synonym: AM1_1106

Alternate gene names: 158334287

Gene position: 1083144-1082782 (Counterclockwise)

Preceding gene: 158334288

Following gene: 158334286

Centisome position: 16.65

GC content: 44.35

Gene sequence:

>363_bases
ATGCGTTTACTAGTCATTGATGACAGTGCAGTCGATCGATTGGCCTTAGTCTCGATGTTGCAAAATCTAGGCCATGACGT
TGATGAATGCGAAGGAACAGAGAATGCCCTCAGACAGATTGAGTCAGGTAACTACAATCTAGTTTTTCTAGATGTCGTTA
TGCCTGGGCAAGATGGGTATAAATTTTTACGATCGCTTCGGTTAAACCCGACTACTGCTGACCAGTACGTGGTTTTCTGT
TCCAGCAAGACTACACCACTAGAAGTGAACTATGGCATTAAACGCGCTGGGGCCAATGACTATCTCACCAAGCCTGTTAC
CAATGAAACCGTCGAAGAAATCTTACAGCGTGTTAACGCTTAA

Upstream 100 bases:

>100_bases
CACACATTAGTTTTTGGTCCATCTATGATTTCAGGTGCTTAGAAATACGCTGCCTCACACAGCAATTTGTTGATAAAGCA
AGTTTTTTGGAGTTTGAAAA

Downstream 100 bases:

>100_bases
TGGAGGTGTAAATGTCAGCTACTGCGACCACTGAATCGATCGTCTCTTCTTCAGCCTCCATTAAAGAGAGGTATATCCTC
ACTCAGGTTGGGGCATGGGT

Product: response regulator receiver domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MRLLVIDDSAVDRLALVSMLQNLGHDVDECEGTENALRQIESGNYNLVFLDVVMPGQDGYKFLRSLRLNPTTADQYVVFC
SSKTTPLEVNYGIKRAGANDYLTKPVTNETVEEILQRVNA

Sequences:

>Translated_120_residues
MRLLVIDDSAVDRLALVSMLQNLGHDVDECEGTENALRQIESGNYNLVFLDVVMPGQDGYKFLRSLRLNPTTADQYVVFC
SSKTTPLEVNYGIKRAGANDYLTKPVTNETVEEILQRVNA
>Mature_120_residues
MRLLVIDDSAVDRLALVSMLQNLGHDVDECEGTENALRQIESGNYNLVFLDVVMPGQDGYKFLRSLRLNPTTADQYVVFC
SSKTTPLEVNYGIKRAGANDYLTKPVTNETVEEILQRVNA

Specific function: May be a part of a signal-transduction system that regulates twitching motility by controlling pilus function (extension and retraction) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788191, Length=119, Percent_Identity=29.4117647058824, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 13410; Mature: 13410

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLVIDDSAVDRLALVSMLQNLGHDVDECEGTENALRQIESGNYNLVFLDVVMPGQDGY
CEEEEECCCHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHCCCCCEEEEEEEEECCCHHH
KFLRSLRLNPTTADQYVVFCSSKTTPLEVNYGIKRAGANDYLTKPVTNETVEEILQRVNA
HHHHHHCCCCCCCCCEEEEECCCCCCEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRLLVIDDSAVDRLALVSMLQNLGHDVDECEGTENALRQIESGNYNLVFLDVVMPGQDGY
CEEEEECCCHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHCCCCCEEEEEEEEECCCHHH
KFLRSLRLNPTTADQYVVFCSSKTTPLEVNYGIKRAGANDYLTKPVTNETVEEILQRVNA
HHHHHHCCCCCCCCCEEEEECCCCCCEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7908398; 10984043 [H]