Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158334252

Identifier: 158334252

GI number: 158334252

Start: 1039191

End: 1040204

Strand: Direct

Name: 158334252

Synonym: AM1_1071

Alternate gene names: NA

Gene position: 1039191-1040204 (Clockwise)

Preceding gene: 158334251

Following gene: 158334253

Centisome position: 15.98

GC content: 51.18

Gene sequence:

>1014_bases
ATGACAACTTGGTATTTCAACTACGGCAGCGATCGCTTAGGTCCCTTTGACGAGAAGCAGGCGATTGACCAAGCTAGACA
AAATCCTAATGGCTATTGCTGGCGACAGGGATTTACCGATTGGCTGCCCATTGCTCAAGTGGCCGAACTTCAGGGAGATG
CTGTTGCCGCTGTGGCCCCCCCTCCCCCACCTCCCGTAGGACCGGGTGCAGCCCATGAGATTGACTATCAAATCTACGGC
GAAGACATGCAGTTTGTCGAAGTCGAACTTGATCCAGGTGAAAGTGCCGTGGCTGAGGCGGGAGCCATGATGTACAAAGA
TGCCGTAGTCCAAATGGAAACGATTTTTGGTGATGGGTCGGCCCAAGCGTCTCAGGGGGGCTTTATGGATAAGTTAGTCG
GCGCAGGCAAACGTCTGGTTACGGGCGAAAGCTTGTTCACAACTGTATTTACCCACGGCGGTCCCCAAGGGAAAGCCCAT
GTCGCTTTTGCGGCTCCGTATCCTGGCACGATTATTGCCGCCAAACTCAGTGATTATGGCGGACGGTTAATTTGTCAAAA
AGACAGTTTCCTCTGCGCTGCAAAAGGGGTTCAAATTGGCATTCATTTCCAAAAGAAAATTCTGACGGGGCTTTTTGGAG
GTGAAGGCTTCATTATGCAGAAGCTAGATGGGACAGGATTGGCCTTTCTCCATGCCGGTGGGACGGTGGTTCAACGGGAC
CTGAAAGCGGGCGAAACCTTACATGTAGATACGGGTTGTCTCGTTGCCCTGACTGATTCTGTCCACTACGACATTCAGCA
AGCAGGCAATGTTAAGTCCATTATCTTTGGTGGAGAAGGATTATTTTTCGCGACCCTAACTGGACCGGGGCATGTGTGGC
TACAATCTCTTCCCTTCTCTAGAATGGCAGGACGGATGTTAGCAGCAGCGCCTCAAAGAAGTGGAGGGAGTAGTCGTGGT
GAAGGATCTTTGCTAGGAAGCCTTGGTGACTTGCTAGATGGTGATAACTTTTAG

Upstream 100 bases:

>100_bases
AATCTGGGAAAGCTATATCACATCGTTCCTTGCTCCCACGGCTTGTGTGGACTTTGAGCAATGATATTTGTAGTTTGGTG
AGCGGCAATTAGAGAGCATC

Downstream 100 bases:

>100_bases
GAGTTGCTAACACCTGCTGTAACCAGGCACGTACGGCAGGCTTTGATTTTTCCTCCGACTGAGTGCTCCGGTTCAAGGCT
TTGTGCGGATTTCAACGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MTTWYFNYGSDRLGPFDEKQAIDQARQNPNGYCWRQGFTDWLPIAQVAELQGDAVAAVAPPPPPPVGPGAAHEIDYQIYG
EDMQFVEVELDPGESAVAEAGAMMYKDAVVQMETIFGDGSAQASQGGFMDKLVGAGKRLVTGESLFTTVFTHGGPQGKAH
VAFAAPYPGTIIAAKLSDYGGRLICQKDSFLCAAKGVQIGIHFQKKILTGLFGGEGFIMQKLDGTGLAFLHAGGTVVQRD
LKAGETLHVDTGCLVALTDSVHYDIQQAGNVKSIIFGGEGLFFATLTGPGHVWLQSLPFSRMAGRMLAAAPQRSGGSSRG
EGSLLGSLGDLLDGDNF

Sequences:

>Translated_337_residues
MTTWYFNYGSDRLGPFDEKQAIDQARQNPNGYCWRQGFTDWLPIAQVAELQGDAVAAVAPPPPPPVGPGAAHEIDYQIYG
EDMQFVEVELDPGESAVAEAGAMMYKDAVVQMETIFGDGSAQASQGGFMDKLVGAGKRLVTGESLFTTVFTHGGPQGKAH
VAFAAPYPGTIIAAKLSDYGGRLICQKDSFLCAAKGVQIGIHFQKKILTGLFGGEGFIMQKLDGTGLAFLHAGGTVVQRD
LKAGETLHVDTGCLVALTDSVHYDIQQAGNVKSIIFGGEGLFFATLTGPGHVWLQSLPFSRMAGRMLAAAPQRSGGSSRG
EGSLLGSLGDLLDGDNF
>Mature_336_residues
TTWYFNYGSDRLGPFDEKQAIDQARQNPNGYCWRQGFTDWLPIAQVAELQGDAVAAVAPPPPPPVGPGAAHEIDYQIYGE
DMQFVEVELDPGESAVAEAGAMMYKDAVVQMETIFGDGSAQASQGGFMDKLVGAGKRLVTGESLFTTVFTHGGPQGKAHV
AFAAPYPGTIIAAKLSDYGGRLICQKDSFLCAAKGVQIGIHFQKKILTGLFGGEGFIMQKLDGTGLAFLHAGGTVVQRDL
KAGETLHVDTGCLVALTDSVHYDIQQAGNVKSIIFGGEGLFFATLTGPGHVWLQSLPFSRMAGRMLAAAPQRSGGSSRGE
GSLLGSLGDLLDGDNF

Specific function: Unknown

COG id: COG2013

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002838
- InterPro:   IPR016031 [H]

Pfam domain/function: PF01987 DUF124 [H]

EC number: NA

Molecular weight: Translated: 35611; Mature: 35479

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTWYFNYGSDRLGPFDEKQAIDQARQNPNGYCWRQGFTDWLPIAQVAELQGDAVAAVAP
CCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCCEEEEECC
PPPPPVGPGAAHEIDYQIYGEDMQFVEVELDPGESAVAEAGAMMYKDAVVQMETIFGDGS
CCCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHEEEEEEECCCC
AQASQGGFMDKLVGAGKRLVTGESLFTTVFTHGGPQGKAHVAFAAPYPGTIIAAKLSDYG
CCCCCCCCHHHHHCCCCEEEECCHHEEHHEECCCCCCCEEEEEECCCCCEEEEEEECCCC
GRLICQKDSFLCAAKGVQIGIHFQKKILTGLFGGEGFIMQKLDGTGLAFLHAGGTVVQRD
CEEEEECCCEEEEECCCEEEEEEHHHHHHHHCCCCCEEEEECCCCCEEEEECCCHHEEHH
LKAGETLHVDTGCLVALTDSVHYDIQQAGNVKSIIFGGEGLFFATLTGPGHVWLQSLPFS
HCCCCEEEECCCEEEEEECCCEEEHHHCCCEEEEEECCCCEEEEEECCCCEEEEECCCHH
RMAGRMLAAAPQRSGGSSRGEGSLLGSLGDLLDGDNF
HHHCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TTWYFNYGSDRLGPFDEKQAIDQARQNPNGYCWRQGFTDWLPIAQVAELQGDAVAAVAP
CEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCCEEEEECC
PPPPPVGPGAAHEIDYQIYGEDMQFVEVELDPGESAVAEAGAMMYKDAVVQMETIFGDGS
CCCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHEEEEEEECCCC
AQASQGGFMDKLVGAGKRLVTGESLFTTVFTHGGPQGKAHVAFAAPYPGTIIAAKLSDYG
CCCCCCCCHHHHHCCCCEEEECCHHEEHHEECCCCCCCEEEEEECCCCCEEEEEEECCCC
GRLICQKDSFLCAAKGVQIGIHFQKKILTGLFGGEGFIMQKLDGTGLAFLHAGGTVVQRD
CEEEEECCCEEEEECCCEEEEEEHHHHHHHHCCCCCEEEEECCCCCEEEEECCCHHEEHH
LKAGETLHVDTGCLVALTDSVHYDIQQAGNVKSIIFGGEGLFFATLTGPGHVWLQSLPFS
HCCCCEEEECCCEEEEEECCCEEEHHHCCCEEEEEECCCCEEEEEECCCCEEEEECCCHH
RMAGRMLAAAPQRSGGSSRGEGSLLGSLGDLLDGDNF
HHHCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA