Click here to switch to the map view.

The map label for this gene is pbsA1 [H]

Identifier: 158334037

GI number: 158334037

Start: 831088

End: 831834

Strand: Reverse

Name: pbsA1 [H]

Synonym: AM1_0850

Alternate gene names: 158334037

Gene position: 831834-831088 (Counterclockwise)

Preceding gene: 158334038

Following gene: 158334035

Centisome position: 12.79

GC content: 45.25

Gene sequence:

>747_bases
ATGAGTGGTAAGTTGGCGACCCGGCTACGAGAAGGGACGAAACAATCTCATTCTTTGGCAGAAAATGCGGATTTCATCCA
ATGTTTTCTCAAAGGAGTGGTTGAGAAAACGTCTTATCGCCAACTATTGGGAAATTTTTACTTTGTCTATACTGCCCTAG
AAGAGCAGCTGACTCAGCATCAAAATCATCCACTTTTAAGTCAACTTTATTTTCCAGAGCTATATCGCCAGCAGAGTTTA
GCGACAGATCTCAGTTATTATTGGGGACCTCAGTGGCAAACGGCAATTACCCCTTCCGATGCCACCCAGCGTTATGTTGA
CAGAATTAATGATATTGCGATCGCAGATCCAATCCTGCTAGTTGCCCATAGCTATACACGGTATCTTGGAGACCTTTCCG
GAGGACAACTGCTCAAGAAGCTTGCCCAAAGAGGTATGAGTTTACCTCAAGGCCAAGGCATCGCTTTTTATGAATTTGAC
GATATCCAGACCCCCAAAACCTTCAAGGCCACCTATCGACAGTCTTTGGATAGCTTGCATCTAGATGAAGCCACCATCAC
CCGCATTGTTGATGAAGCTAACCTGGCTTTTAAGCTCAATATGGAATTGTTCAAAGAAGTAGAAGGTAACTTGATTCAAG
CCATTGGTCAGATGATCTTTAGTCATCTGACCCGCTCTCGTAGAAATCGGCAGACTCCGTGGTCTACAGAGTTGGGAGAC
CCCACTGCACTGCAGCCCCAGGATTAA

Upstream 100 bases:

>100_bases
GTTCATAATTTTGTGTAAGCTTAACCGGTAAAGGCGATTTCTTTTCGCCTCACACTGCTTATCCAACTCCAATGATGATT
CGTGTAGAGGCTGCAAATTG

Downstream 100 bases:

>100_bases
CTGCGTCCCTCAGGGTTTGATTAAGCTGATCGATGGAAGCGATCAAGCGCTCGTTTGCCTCAAGAACAGGATCTGGCGTC
ATTCCTTCTGCCATTTCTTG

Product: heme oxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSGKLATRLREGTKQSHSLAENADFIQCFLKGVVEKTSYRQLLGNFYFVYTALEEQLTQHQNHPLLSQLYFPELYRQQSL
ATDLSYYWGPQWQTAITPSDATQRYVDRINDIAIADPILLVAHSYTRYLGDLSGGQLLKKLAQRGMSLPQGQGIAFYEFD
DIQTPKTFKATYRQSLDSLHLDEATITRIVDEANLAFKLNMELFKEVEGNLIQAIGQMIFSHLTRSRRNRQTPWSTELGD
PTALQPQD

Sequences:

>Translated_248_residues
MSGKLATRLREGTKQSHSLAENADFIQCFLKGVVEKTSYRQLLGNFYFVYTALEEQLTQHQNHPLLSQLYFPELYRQQSL
ATDLSYYWGPQWQTAITPSDATQRYVDRINDIAIADPILLVAHSYTRYLGDLSGGQLLKKLAQRGMSLPQGQGIAFYEFD
DIQTPKTFKATYRQSLDSLHLDEATITRIVDEANLAFKLNMELFKEVEGNLIQAIGQMIFSHLTRSRRNRQTPWSTELGD
PTALQPQD
>Mature_247_residues
SGKLATRLREGTKQSHSLAENADFIQCFLKGVVEKTSYRQLLGNFYFVYTALEEQLTQHQNHPLLSQLYFPELYRQQSLA
TDLSYYWGPQWQTAITPSDATQRYVDRINDIAIADPILLVAHSYTRYLGDLSGGQLLKKLAQRGMSLPQGQGIAFYEFDD
IQTPKTFKATYRQSLDSLHLDEATITRIVDEANLAFKLNMELFKEVEGNLIQAIGQMIFSHLTRSRRNRQTPWSTELGDP
TALQPQD

Specific function: Catalyzes the opening of the heme ring with the release of iron. Key enzyme in the synthesis of the chromophoric part of the photosynthetic antennae [H]

COG id: COG5398

COG function: function code P; Heme oxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme oxygenase family [H]

Homologues:

Organism=Homo sapiens, GI187761311, Length=206, Percent_Identity=45.1456310679612, Blast_Score=201, Evalue=7e-52,
Organism=Homo sapiens, GI187761309, Length=206, Percent_Identity=45.1456310679612, Blast_Score=201, Evalue=7e-52,
Organism=Homo sapiens, GI187761307, Length=206, Percent_Identity=45.1456310679612, Blast_Score=201, Evalue=7e-52,
Organism=Homo sapiens, GI8051608, Length=206, Percent_Identity=45.1456310679612, Blast_Score=201, Evalue=7e-52,
Organism=Homo sapiens, GI4504437, Length=210, Percent_Identity=43.3333333333333, Blast_Score=199, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002051
- InterPro:   IPR016053
- InterPro:   IPR016084
- InterPro:   IPR018207 [H]

Pfam domain/function: PF01126 Heme_oxygenase [H]

EC number: =1.14.99.3 [H]

Molecular weight: Translated: 28372; Mature: 28241

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00593 HEME_OXYGENASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGKLATRLREGTKQSHSLAENADFIQCFLKGVVEKTSYRQLLGNFYFVYTALEEQLTQH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNHPLLSQLYFPELYRQQSLATDLSYYWGPQWQTAITPSDATQRYVDRINDIAIADPILL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
VAHSYTRYLGDLSGGQLLKKLAQRGMSLPQGQGIAFYEFDDIQTPKTFKATYRQSLDSLH
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
LDEATITRIVDEANLAFKLNMELFKEVEGNLIQAIGQMIFSHLTRSRRNRQTPWSTELGD
CCHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PTALQPQD
CCCCCCCC
>Mature Secondary Structure 
SGKLATRLREGTKQSHSLAENADFIQCFLKGVVEKTSYRQLLGNFYFVYTALEEQLTQH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNHPLLSQLYFPELYRQQSLATDLSYYWGPQWQTAITPSDATQRYVDRINDIAIADPILL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
VAHSYTRYLGDLSGGQLLKKLAQRGMSLPQGQGIAFYEFDDIQTPKTFKATYRQSLDSLH
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
LDEATITRIVDEANLAFKLNMELFKEVEGNLIQAIGQMIFSHLTRSRRNRQTPWSTELGD
CCHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PTALQPQD
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]