Click here to switch to the map view.

The map label for this gene is 158334032

Identifier: 158334032

GI number: 158334032

Start: 826270

End: 826680

Strand: Reverse

Name: 158334032

Synonym: AM1_0846

Alternate gene names: NA

Gene position: 826680-826270 (Counterclockwise)

Preceding gene: 158334033

Following gene: 158334031

Centisome position: 12.71

GC content: 49.15

Gene sequence:

>411_bases
ATGGGTGCCCGATTACGTACTTTATTGAATAGCTCAGAAGAACAGACCTTATTTGAACTGAGGACAGCAACAACAGTCCC
CCAACGGGTCAAAGATCGAGCCGCAATGATTCGATTGAGTCATCAGGGGATGTATGTAGAGAAAATTGCAGCCCTATTCC
AGTGTAATGTTCGGACCGTTCGCCAAACCCTTCATCGCTGGCAACAGAAGGGATTAGGAGGGCTATGGGATGCACCACAT
CCGGGTGCTCAGCGACGTTGGAACCCCGAGGATATCGAGTATCTTGAAACCTGTTTGCGTCAGGAAGAACGCACCTACAA
TAGCCAACAACTGTCCCAGAAACTGGCGAAGGAGCGTAACGTTCACTTAAGTGCAGACCGCATTAGGCAGATTCTCAAAA
AAAGGGGGTGA

Upstream 100 bases:

>100_bases
AACCACCGACGAATACGACGATAAGTAGCCCAGCCTTGAAAAGCTCAATTAGATGAAGTTGAATGAATCTACCCACACTA
TCGTTTAGGAGATTGTGAGG

Downstream 100 bases:

>100_bases
TCTGGAAACGAACTCGTCATAGTCACCGCAATAAGCAAGACCCTGTTAAGAAAGCTATCAAACTCGCTGATTTAGAGATG
TTGCAGTGGGCAGCAGCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Exodeoxyribonuclease V Alpha Chain

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MGARLRTLLNSSEEQTLFELRTATTVPQRVKDRAAMIRLSHQGMYVEKIAALFQCNVRTVRQTLHRWQQKGLGGLWDAPH
PGAQRRWNPEDIEYLETCLRQEERTYNSQQLSQKLAKERNVHLSADRIRQILKKRG

Sequences:

>Translated_136_residues
MGARLRTLLNSSEEQTLFELRTATTVPQRVKDRAAMIRLSHQGMYVEKIAALFQCNVRTVRQTLHRWQQKGLGGLWDAPH
PGAQRRWNPEDIEYLETCLRQEERTYNSQQLSQKLAKERNVHLSADRIRQILKKRG
>Mature_135_residues
GARLRTLLNSSEEQTLFELRTATTVPQRVKDRAAMIRLSHQGMYVEKIAALFQCNVRTVRQTLHRWQQKGLGGLWDAPHP
GAQRRWNPEDIEYLETCLRQEERTYNSQQLSQKLAKERNVHLSADRIRQILKKRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15952; Mature: 15820

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGARLRTLLNSSEEQTLFELRTATTVPQRVKDRAAMIRLSHQGMYVEKIAALFQCNVRTV
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH
RQTLHRWQQKGLGGLWDAPHPGAQRRWNPEDIEYLETCLRQEERTYNSQQLSQKLAKERN
HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
VHLSADRIRQILKKRG
CCCCHHHHHHHHHHCC
>Mature Secondary Structure 
GARLRTLLNSSEEQTLFELRTATTVPQRVKDRAAMIRLSHQGMYVEKIAALFQCNVRTV
CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH
RQTLHRWQQKGLGGLWDAPHPGAQRRWNPEDIEYLETCLRQEERTYNSQQLSQKLAKERN
HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
VHLSADRIRQILKKRG
CCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA