| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158334004
Identifier: 158334004
GI number: 158334004
Start: 797822
End: 799327
Strand: Reverse
Name: 158334004
Synonym: AM1_0818
Alternate gene names: NA
Gene position: 799327-797822 (Counterclockwise)
Preceding gene: 158334005
Following gene: 158334003
Centisome position: 12.29
GC content: 51.33
Gene sequence:
>1506_bases ATGCCATTTATCACAGCGAAAAAGAATACACTCCTGGCACCCCTACCACACCAACCCCACCTTCAAAAATTAAATCAACT CGCAAAAGTCTATGAGGGGGGAATCTTAGGCGTTATCAAAGTGTCTACTGTCAATTCACAGTTGGCTGAGATTATCTTGG CGGGGCCTTATACCTGGCATGACCATTACCCAACCATTGAAACGGGTGTCAAACGGTATATCAATCCCATCTCATGGGAT ATTCCAGAAGATGCATGGGAACAGCAGCCCGTTTCTGCCCTGGCTCCAGCTTCTACTCCCTCTCAACCAGAGACTCCCTC TGCTCCGTTATTACCGCCGGAAGTAGCCCAACTCAACCACTTTTACGAAGGCTGTCAACGGAAATTACCGGACGGGCGAA TCCAAGCTTACCCGGATCCAAGGGCTGGCAGTGGGGGCTTACCCGTCACCATCGGTTGGGGCAGTACCTACTATAAAAAT GGGTCAGCCATCCAAATGGGAGATATCATCACCCAAGCTGAAGCAGATGACCTGTACGACTATATTTGCCACAAAGATTT TTGGCTCAAGCTGCAATCGACCATCCCTTATTGGGACGACATGACTGATCTACAACGAGCCGCACTGACCAGCTTTGCCT ATAACAATGGTGCTGATTTTTATGGATCACCGAACCATAGAACCATCACCCGCAACTTAAAAGACAAAGATTGGCAGGCG GTTCCCGGCACCCTGATGATGTATCGCAACCCCAGCGAAAATGTGGAAGTGGGGCTGGGTCGCCGTCGATATGCCGAGGC CAAAGTCTGGTGTGGCGAAGCACCGACCACCGCCTGTGCCGCCGCTGCCCAGGAAATTCAAACGGCCCAGGATTGCGAAC CCATTGAACAGCGACTCAAAACAAACCCACCGAGGGTAGTAGGTTTTGAACCAACGATAACCGTCTCGCAACCCACCCCA TCGGCTGGTCCTCGCCAAGCCAATATTATTGCAGGGATGAAAGGTCCCAAGTCCCATCCGGATGCCCATGGCTTTAAGCC CGGAGACTACCATCTGGTGGCCAATGATGCCGTTGGCAAGATCAAGTGTTACGACTATAGCGGCACGCTAATGTGGGAAT TGACCTGTCTCTGTCGTGGTCAGTTTGAGGACAATTACTTTGGCCGTCATGGGGATACCCCCGCCGGTCTTTACAAATGT GGGCAAATTTATCGCGACTATGAGCAAGCGGGTGAAAGTTCTGCCTATACCCGCGATCGCATGTCTTATGGCTGGTATAG TCTCGATTTAGTTGAACTCGAAAACCAAGAAGCCAACCTGGGTCGGGCAGGCATTATGCTCCACGGCGGCGGCAGCGGTT GCGGATGGCCAGGAGCTTGGGCACCAAAGCAAGCTCTTTTCTCCACCCTAGGCTGCATTAGAATGCATAACCAAGATTTA AGAGACAAAGTGGTGCCTTTGTATGATCAACCCGGTGCAACCCTCTTTGTCAGTGTCTATCAGTAG
Upstream 100 bases:
>100_bases TAACGGTGCCTTCCACCGAGATGGTCTCAACTACATCCAAAGTGATCAAGGTCCAAACCCCTGAGAAAGAATTAACCGCC GTTTTACAGGAGGGCTGGTA
Downstream 100 bases:
>100_bases TCAAGAGGCAAGAGTACGGGTTAGTACTCCACCAGACAATATCCAGTGGAGTACTAACCCCCGGAAGTGCCTTTTCTGCA AAGCCGTAGATGAGGTGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Glycoside Hydrolase Family
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MPFITAKKNTLLAPLPHQPHLQKLNQLAKVYEGGILGVIKVSTVNSQLAEIILAGPYTWHDHYPTIETGVKRYINPISWD IPEDAWEQQPVSALAPASTPSQPETPSAPLLPPEVAQLNHFYEGCQRKLPDGRIQAYPDPRAGSGGLPVTIGWGSTYYKN GSAIQMGDIITQAEADDLYDYICHKDFWLKLQSTIPYWDDMTDLQRAALTSFAYNNGADFYGSPNHRTITRNLKDKDWQA VPGTLMMYRNPSENVEVGLGRRRYAEAKVWCGEAPTTACAAAAQEIQTAQDCEPIEQRLKTNPPRVVGFEPTITVSQPTP SAGPRQANIIAGMKGPKSHPDAHGFKPGDYHLVANDAVGKIKCYDYSGTLMWELTCLCRGQFEDNYFGRHGDTPAGLYKC GQIYRDYEQAGESSAYTRDRMSYGWYSLDLVELENQEANLGRAGIMLHGGGSGCGWPGAWAPKQALFSTLGCIRMHNQDL RDKVVPLYDQPGATLFVSVYQ
Sequences:
>Translated_501_residues MPFITAKKNTLLAPLPHQPHLQKLNQLAKVYEGGILGVIKVSTVNSQLAEIILAGPYTWHDHYPTIETGVKRYINPISWD IPEDAWEQQPVSALAPASTPSQPETPSAPLLPPEVAQLNHFYEGCQRKLPDGRIQAYPDPRAGSGGLPVTIGWGSTYYKN GSAIQMGDIITQAEADDLYDYICHKDFWLKLQSTIPYWDDMTDLQRAALTSFAYNNGADFYGSPNHRTITRNLKDKDWQA VPGTLMMYRNPSENVEVGLGRRRYAEAKVWCGEAPTTACAAAAQEIQTAQDCEPIEQRLKTNPPRVVGFEPTITVSQPTP SAGPRQANIIAGMKGPKSHPDAHGFKPGDYHLVANDAVGKIKCYDYSGTLMWELTCLCRGQFEDNYFGRHGDTPAGLYKC GQIYRDYEQAGESSAYTRDRMSYGWYSLDLVELENQEANLGRAGIMLHGGGSGCGWPGAWAPKQALFSTLGCIRMHNQDL RDKVVPLYDQPGATLFVSVYQ >Mature_500_residues PFITAKKNTLLAPLPHQPHLQKLNQLAKVYEGGILGVIKVSTVNSQLAEIILAGPYTWHDHYPTIETGVKRYINPISWDI PEDAWEQQPVSALAPASTPSQPETPSAPLLPPEVAQLNHFYEGCQRKLPDGRIQAYPDPRAGSGGLPVTIGWGSTYYKNG SAIQMGDIITQAEADDLYDYICHKDFWLKLQSTIPYWDDMTDLQRAALTSFAYNNGADFYGSPNHRTITRNLKDKDWQAV PGTLMMYRNPSENVEVGLGRRRYAEAKVWCGEAPTTACAAAAQEIQTAQDCEPIEQRLKTNPPRVVGFEPTITVSQPTPS AGPRQANIIAGMKGPKSHPDAHGFKPGDYHLVANDAVGKIKCYDYSGTLMWELTCLCRGQFEDNYFGRHGDTPAGLYKCG QIYRDYEQAGESSAYTRDRMSYGWYSLDLVELENQEANLGRAGIMLHGGGSGCGWPGAWAPKQALFSTLGCIRMHNQDLR DKVVPLYDQPGATLFVSVYQ
Specific function: Unknown
COG id: COG3772
COG function: function code R; Phage-related lysozyme (muraminidase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55480; Mature: 55349
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFITAKKNTLLAPLPHQPHLQKLNQLAKVYEGGILGVIKVSTVNSQLAEIILAGPYTWH CCCEECCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHEEEECCCEEC DHYPTIETGVKRYINPISWDIPEDAWEQQPVSALAPASTPSQPETPSAPLLPPEVAQLNH CCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHH FYEGCQRKLPDGRIQAYPDPRAGSGGLPVTIGWGSTYYKNGSAIQMGDIITQAEADDLYD HHHHHHHCCCCCCEEECCCCCCCCCCCEEEECCCCCEECCCCEEEECHHHHHCCHHHHHH YICHKDFWLKLQSTIPYWDDMTDLQRAALTSFAYNNGADFYGSPNHRTITRNLKDKDWQA HHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCC VPGTLMMYRNPSENVEVGLGRRRYAEAKVWCGEAPTTACAAAAQEIQTAQDCEPIEQRLK CCCEEEEEECCCCCEEECCCCHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHH TNPPRVVGFEPTITVSQPTPSAGPRQANIIAGMKGPKSHPDAHGFKPGDYHLVANDAVGK CCCCEEEECCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCE IKCYDYSGTLMWELTCLCRGQFEDNYFGRHGDTPAGLYKCGQIYRDYEQAGESSAYTRDR EEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH MSYGWYSLDLVELENQEANLGRAGIMLHGGGSGCGWPGAWAPKQALFSTLGCIRMHNQDL CCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH RDKVVPLYDQPGATLFVSVYQ HHCCCCEECCCCCEEEEEEEC >Mature Secondary Structure PFITAKKNTLLAPLPHQPHLQKLNQLAKVYEGGILGVIKVSTVNSQLAEIILAGPYTWH CCEECCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHEEEECCCEEC DHYPTIETGVKRYINPISWDIPEDAWEQQPVSALAPASTPSQPETPSAPLLPPEVAQLNH CCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHH FYEGCQRKLPDGRIQAYPDPRAGSGGLPVTIGWGSTYYKNGSAIQMGDIITQAEADDLYD HHHHHHHCCCCCCEEECCCCCCCCCCCEEEECCCCCEECCCCEEEECHHHHHCCHHHHHH YICHKDFWLKLQSTIPYWDDMTDLQRAALTSFAYNNGADFYGSPNHRTITRNLKDKDWQA HHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCC VPGTLMMYRNPSENVEVGLGRRRYAEAKVWCGEAPTTACAAAAQEIQTAQDCEPIEQRLK CCCEEEEEECCCCCEEECCCCHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHH TNPPRVVGFEPTITVSQPTPSAGPRQANIIAGMKGPKSHPDAHGFKPGDYHLVANDAVGK CCCCEEEECCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCE IKCYDYSGTLMWELTCLCRGQFEDNYFGRHGDTPAGLYKCGQIYRDYEQAGESSAYTRDR EEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH MSYGWYSLDLVELENQEANLGRAGIMLHGGGSGCGWPGAWAPKQALFSTLGCIRMHNQDL CCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH RDKVVPLYDQPGATLFVSVYQ HHCCCCEECCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA