| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158333985
Identifier: 158333985
GI number: 158333985
Start: 776219
End: 777136
Strand: Direct
Name: 158333985
Synonym: AM1_0799
Alternate gene names: NA
Gene position: 776219-777136 (Clockwise)
Preceding gene: 158333984
Following gene: 158333986
Centisome position: 11.93
GC content: 46.73
Gene sequence:
>918_bases ATGTCTAACGCGCATTCATCTAAGGTTTCAATCTATGCAGCCATGGCTGCCAATATTGCCATTGGCATCGCTAAGTTTAT CGGTGCCGGAATTAGCGGCAGCTCAGCCATGTTATCAGAGGGCATTCATTCTGTGGTGGATTCCACCAATGAAGTGCTAT TACTCTACGGTCTTCATAAGAGTGAAACGGGACCAGATGAACAGCATCCCCTGGGCTATGGACAAGAACTTTATTTCTGG TCTTTGATCGTTGCTGTTTTGATCTTTGCTTTAGGCGGTGGCCTTTCCATCTTTGAAGGCATTACGAGCATGCAAGTGCA GGCCCCAGCCCATGATCCTATGCTCAGCTATATCGTCTTGGCCGCCTCCGCTGTATTTGAGGGAATTGCTTTATTCGTCT CGATTCGTGAGTTTAATAAGGCCACCCCGAAAACCTCCAGTAGTTTCTGGAAAACCTTAAGCAACAGCAAAGATCCCAGC TCGTTTATTGTTATTTTTGAAGACTGTGCTGCGTTGATTGGTCTAGGGGTGGCCTTTATCGGCGTATTTATGACCGAACT GAAGGGCAATTCTATCTACGACAGTATTGCCTCCATTATCATCGGGCTATTGCTAACCGTGGTTGCCGTTGTGCTGGTTA TTGAAACCAAAGGTTTACTCATTGGTGAAAGTGCTTCACCAGAAACCCGCGAGAGTATTAAACAGATTGTTAAATCGGAT GATGCCGTCACTCGCATGGAGTCCCCCATCACCCTCCACTTTGGTCCCCAAGATATAATGTTGGCCATGAACATCGAGTT TAGAGATGACCTCTCTTCCGATGAGATCGAAGCGGCTACCCGCCGTATTGAGCGAAAAATCCGAGAATCCCACACAGAAG TAAAGCGTATCTTTCTAGAAGCAGCTTCTGTCGTCTGA
Upstream 100 bases:
>100_bases TGGGAAAAACCATTTTTGGGGCTGTGGGAGCTTGCAGACTATCTTCCACCACCGCCCTGTCTCACCCTTCAAACGGAACT AGCGACTCAACTTCACTTTT
Downstream 100 bases:
>100_bases CCAGCACTATCTAGGGAGCTAGGTGATGAGTCCCCAGCCTTTCCAACCGCCAGACGAATTTGAGTCTTTACTGTCAACTC AACGCCAAACGAACGCTGAT
Product: cation transporter
Products: NA
Alternate protein names: Cation Efflux Family Protein; Cation Transporter; Cation Efflux Protein; Integral Membrane Protein; Membrane Transporter; Co/Zn/Cd Cation Transporter; Cation Diffusion Facilitator Family Protein; Cation Efflux System Protein; Cobalt-Zinc-Cadmium Resistance Protein CzcD; CDF Family Transporter; Cation-Efflux Pump; Cation Transporter Permease Component; Cation Efflux Transporter; CDF Family Heavy Metal/H(+) Antiporter; Zinc/Cadmium/Cations Transporter; CDF Family Cation Efflux Protein; Cation Transporter Protein; Cation Efflux System
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MSNAHSSKVSIYAAMAANIAIGIAKFIGAGISGSSAMLSEGIHSVVDSTNEVLLLYGLHKSETGPDEQHPLGYGQELYFW SLIVAVLIFALGGGLSIFEGITSMQVQAPAHDPMLSYIVLAASAVFEGIALFVSIREFNKATPKTSSSFWKTLSNSKDPS SFIVIFEDCAALIGLGVAFIGVFMTELKGNSIYDSIASIIIGLLLTVVAVVLVIETKGLLIGESASPETRESIKQIVKSD DAVTRMESPITLHFGPQDIMLAMNIEFRDDLSSDEIEAATRRIERKIRESHTEVKRIFLEAASVV
Sequences:
>Translated_305_residues MSNAHSSKVSIYAAMAANIAIGIAKFIGAGISGSSAMLSEGIHSVVDSTNEVLLLYGLHKSETGPDEQHPLGYGQELYFW SLIVAVLIFALGGGLSIFEGITSMQVQAPAHDPMLSYIVLAASAVFEGIALFVSIREFNKATPKTSSSFWKTLSNSKDPS SFIVIFEDCAALIGLGVAFIGVFMTELKGNSIYDSIASIIIGLLLTVVAVVLVIETKGLLIGESASPETRESIKQIVKSD DAVTRMESPITLHFGPQDIMLAMNIEFRDDLSSDEIEAATRRIERKIRESHTEVKRIFLEAASVV >Mature_304_residues SNAHSSKVSIYAAMAANIAIGIAKFIGAGISGSSAMLSEGIHSVVDSTNEVLLLYGLHKSETGPDEQHPLGYGQELYFWS LIVAVLIFALGGGLSIFEGITSMQVQAPAHDPMLSYIVLAASAVFEGIALFVSIREFNKATPKTSSSFWKTLSNSKDPSS FIVIFEDCAALIGLGVAFIGVFMTELKGNSIYDSIASIIIGLLLTVVAVVLVIETKGLLIGESASPETRESIKQIVKSDD AVTRMESPITLHFGPQDIMLAMNIEFRDDLSSDEIEAATRRIERKIRESHTEVKRIFLEAASVV
Specific function: Unknown
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI57164948, Length=243, Percent_Identity=32.5102880658436, Blast_Score=149, Evalue=5e-36, Organism=Caenorhabditis elegans, GI115534117, Length=248, Percent_Identity=31.8548387096774, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI24653141, Length=209, Percent_Identity=36.3636363636364, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI24653143, Length=209, Percent_Identity=36.3636363636364, Blast_Score=130, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32790; Mature: 32659
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAHSSKVSIYAAMAANIAIGIAKFIGAGISGSSAMLSEGIHSVVDSTNEVLLLYGLHK CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCC SETGPDEQHPLGYGQELYFWSLIVAVLIFALGGGLSIFEGITSMQVQAPAHDPMLSYIVL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCHHHCEEECCCCCHHHHHHHH AASAVFEGIALFVSIREFNKATPKTSSSFWKTLSNSKDPSSFIVIFEDCAALIGLGVAFI HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHH GVFMTELKGNSIYDSIASIIIGLLLTVVAVVLVIETKGLLIGESASPETRESIKQIVKSD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCC DAVTRMESPITLHFGPQDIMLAMNIEFRDDLSSDEIEAATRRIERKIRESHTEVKRIFLE HHHHHHCCCEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AASVV HHHCC >Mature Secondary Structure SNAHSSKVSIYAAMAANIAIGIAKFIGAGISGSSAMLSEGIHSVVDSTNEVLLLYGLHK CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCC SETGPDEQHPLGYGQELYFWSLIVAVLIFALGGGLSIFEGITSMQVQAPAHDPMLSYIVL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCHHHCEEECCCCCHHHHHHHH AASAVFEGIALFVSIREFNKATPKTSSSFWKTLSNSKDPSSFIVIFEDCAALIGLGVAFI HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHH GVFMTELKGNSIYDSIASIIIGLLLTVVAVVLVIETKGLLIGESASPETRESIKQIVKSD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCC DAVTRMESPITLHFGPQDIMLAMNIEFRDDLSSDEIEAATRRIERKIRESHTEVKRIFLE HHHHHHCCCEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AASVV HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA