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The map label for this gene is ywdK [H]

Identifier: 158333962

GI number: 158333962

Start: 754000

End: 754386

Strand: Reverse

Name: ywdK [H]

Synonym: AM1_0776

Alternate gene names: 158333962

Gene position: 754386-754000 (Counterclockwise)

Preceding gene: 158333963

Following gene: 158333961

Centisome position: 11.6

GC content: 48.58

Gene sequence:

>387_bases
ATGGCGAAAATATTCCTAATGGCTGGTGCTGCTTTCGGTGGCCTTTCAGTGGCAGCAGGGGCTTTTGCCTCCCATGCTCT
CAAAGCTCAACTTAGTGAAAAGTCACAACAGATTTTTGAGACTGGCACTAAGTATCAGATGTATCATGCTCTCGCTTTGA
TCCTGGTATCACTGCTGTTGAGTCGGGCAGAAGGAGGAGAAGGATTACTGACCCTGGCAGGCTATGCCTTTATGGCCGGT
ATCGTTCTATTTTCTGGCAGCCTCTATGGATTGAGCCTATCTGAGATCAAGTGGTTTGGCCCCATTACCCCATTAGGAGG
TGTTGCCTTTTTAGTCGGGTGGGGATGCATTGCGATCGCAGCCTTAAAATCATCTCCTATCAGCTAG

Upstream 100 bases:

>100_bases
TGGGGGTAGCGCCTTGCATCATGCCTGAATGGATCATAAAGATGAATTAAAACAATGCCATGATCCATAATGTTACTTTC
ATCAAGAGAATCAGGAATTC

Downstream 100 bases:

>100_bases
CTAGGACTCCTGCAATGTCTTTATCAAAGCAACCTAACTCTCCTGGTCAGGTGCCCCATTATCATGAGCCAGAACGCACC
TATCAGGCTGAACTTGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MAKIFLMAGAAFGGLSVAAGAFASHALKAQLSEKSQQIFETGTKYQMYHALALILVSLLLSRAEGGEGLLTLAGYAFMAG
IVLFSGSLYGLSLSEIKWFGPITPLGGVAFLVGWGCIAIAALKSSPIS

Sequences:

>Translated_128_residues
MAKIFLMAGAAFGGLSVAAGAFASHALKAQLSEKSQQIFETGTKYQMYHALALILVSLLLSRAEGGEGLLTLAGYAFMAG
IVLFSGSLYGLSLSEIKWFGPITPLGGVAFLVGWGCIAIAALKSSPIS
>Mature_127_residues
AKIFLMAGAAFGGLSVAAGAFASHALKAQLSEKSQQIFETGTKYQMYHALALILVSLLLSRAEGGEGLLTLAGYAFMAGI
VLFSGSLYGLSLSEIKWFGPITPLGGVAFLVGWGCIAIAALKSSPIS

Specific function: Unknown

COG id: COG2363

COG function: function code S; Uncharacterized small membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0382 family [H]

Homologues:

Organism=Escherichia coli, GI1789172, Length=128, Percent_Identity=35.15625, Blast_Score=67, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI193203406, Length=116, Percent_Identity=31.8965517241379, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006696 [H]

Pfam domain/function: PF04241 DUF423 [H]

EC number: NA

Molecular weight: Translated: 13203; Mature: 13072

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIFLMAGAAFGGLSVAAGAFASHALKAQLSEKSQQIFETGTKYQMYHALALILVSLLL
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SRAEGGEGLLTLAGYAFMAGIVLFSGSLYGLSLSEIKWFGPITPLGGVAFLVGWGCIAIA
HHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ALKSSPIS
HHHCCCCC
>Mature Secondary Structure 
AKIFLMAGAAFGGLSVAAGAFASHALKAQLSEKSQQIFETGTKYQMYHALALILVSLLL
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SRAEGGEGLLTLAGYAFMAGIVLFSGSLYGLSLSEIKWFGPITPLGGVAFLVGWGCIAIA
HHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ALKSSPIS
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]