Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158333714

Identifier: 158333714

GI number: 158333714

Start: 492902

End: 493978

Strand: Direct

Name: 158333714

Synonym: AM1_0520

Alternate gene names: NA

Gene position: 492902-493978 (Clockwise)

Preceding gene: 158333713

Following gene: 158333715

Centisome position: 7.58

GC content: 42.06

Gene sequence:

>1077_bases
TTGGATTGGCGCGATCCCTTATGGTCAGACCTGCTGACTCACCTGTCTCACGACATTTACCACTTACCTGAATATCTGTA
TTGTGAGGCCCTGAGAACCCAAAGCATTCCAGAAGCAATCCTAATTACAGAGGGGCAAAAAGTCTGCCTAATTCCCTATC
TACGACGGTCTTGCAATTTCATTCCAACAGCATCGTCCCCTACTAATATCTATGACATCACATCACCCAATGGGTATTCA
GGATTTTTACTCAATCCAGCAGCCCTAGACGATTCAGCATTTGGCTTCCATGCTTGGCAGCAATTTCTTGACTTAGGAAA
AGAACAGGGAATTTGCTCAGCGTTTCTTCGTCTTCACCCTAGTCTTAATACCATTCATCCCCAAGGGATAAATAATATCC
TCGTCAAAAAAGTGGGGCATACGGTCTCCATTAACTTAGGGCTTTCAGAATCAGACCTCTGGAGTCATACCCATAAAAGC
CAGCGAAACAAAATTAACCGAGGGAAACGACTGGGGTTAGTGGCAAAGATCAAGCCATTTTCTGAATACATCAATGAATT
CTGCAACATCTATGAAGCTACGATGCAGCGGGTTGAAGCTGAGACCAGCTTTTTTTCATTTAATCGAGATTACTTTTACC
TACTCCAAAAGCATCTTGGTCATAAACTATTCGTTTGTATTGTTGAATACCAAGATGAAATTATTTCTGCTGGACTCTAT
TCGGAATGTTCGGGTATTGTCCAAGGACTATTAGGAGGGACAACCCCTGAAGGGCTAAAACTTTCTCCCACAAGCCTAGA
GTTTTATCAAACGAGTCTATGGGCAAAGCAGCGGGGGAATACAATCCTTCATTTAGGCGGTGGAGTCGGTTGTTCTGAAG
ATGGTCTTTATCAATACAAAGCAAACTTTTCGAAGCAAAGGCATGAGTTTTATACCGCATCTATCATTATTAAGCCGCTA
CAATATAAACTGCTCCTTGAATCCCATTCAAAAGCGCATAACATTGATCTTGACCATTTAAACTCTATTCAGTTTTTCCC
AGCTTACCGATATAGACCCAATCCCAGTGAGTTTTAG

Upstream 100 bases:

>100_bases
GTTGTGTAGAACCCTCCCCAACGGCGATCCAGACTTTAGTGACCCGAGTGTTTTTCCAAAACTATGGTCAGAACCTTAAA
CAGTAATGAAAAGCAAAGTA

Downstream 100 bases:

>100_bases
AGATTAATCATTTTTTACCCAGTCTGAAAGATAAGTCATAGGTAAAATCGAAAATGGATGTGCAGATACTTGCATTAGAT
GATCCTCGCTGGCTCCAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MDWRDPLWSDLLTHLSHDIYHLPEYLYCEALRTQSIPEAILITEGQKVCLIPYLRRSCNFIPTASSPTNIYDITSPNGYS
GFLLNPAALDDSAFGFHAWQQFLDLGKEQGICSAFLRLHPSLNTIHPQGINNILVKKVGHTVSINLGLSESDLWSHTHKS
QRNKINRGKRLGLVAKIKPFSEYINEFCNIYEATMQRVEAETSFFSFNRDYFYLLQKHLGHKLFVCIVEYQDEIISAGLY
SECSGIVQGLLGGTTPEGLKLSPTSLEFYQTSLWAKQRGNTILHLGGGVGCSEDGLYQYKANFSKQRHEFYTASIIIKPL
QYKLLLESHSKAHNIDLDHLNSIQFFPAYRYRPNPSEF

Sequences:

>Translated_358_residues
MDWRDPLWSDLLTHLSHDIYHLPEYLYCEALRTQSIPEAILITEGQKVCLIPYLRRSCNFIPTASSPTNIYDITSPNGYS
GFLLNPAALDDSAFGFHAWQQFLDLGKEQGICSAFLRLHPSLNTIHPQGINNILVKKVGHTVSINLGLSESDLWSHTHKS
QRNKINRGKRLGLVAKIKPFSEYINEFCNIYEATMQRVEAETSFFSFNRDYFYLLQKHLGHKLFVCIVEYQDEIISAGLY
SECSGIVQGLLGGTTPEGLKLSPTSLEFYQTSLWAKQRGNTILHLGGGVGCSEDGLYQYKANFSKQRHEFYTASIIIKPL
QYKLLLESHSKAHNIDLDHLNSIQFFPAYRYRPNPSEF
>Mature_358_residues
MDWRDPLWSDLLTHLSHDIYHLPEYLYCEALRTQSIPEAILITEGQKVCLIPYLRRSCNFIPTASSPTNIYDITSPNGYS
GFLLNPAALDDSAFGFHAWQQFLDLGKEQGICSAFLRLHPSLNTIHPQGINNILVKKVGHTVSINLGLSESDLWSHTHKS
QRNKINRGKRLGLVAKIKPFSEYINEFCNIYEATMQRVEAETSFFSFNRDYFYLLQKHLGHKLFVCIVEYQDEIISAGLY
SECSGIVQGLLGGTTPEGLKLSPTSLEFYQTSLWAKQRGNTILHLGGGVGCSEDGLYQYKANFSKQRHEFYTASIIIKPL
QYKLLLESHSKAHNIDLDHLNSIQFFPAYRYRPNPSEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40807; Mature: 40807

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWRDPLWSDLLTHLSHDIYHLPEYLYCEALRTQSIPEAILITEGQKVCLIPYLRRSCNF
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCEEEEHHHHHCCCC
IPTASSPTNIYDITSPNGYSGFLLNPAALDDSAFGFHAWQQFLDLGKEQGICSAFLRLHP
CCCCCCCCCEEECCCCCCCCCEEECCHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCC
SLNTIHPQGINNILVKKVGHTVSINLGLSESDLWSHTHKSQRNKINRGKRLGLVAKIKPF
CCCCCCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCHH
SEYINEFCNIYEATMQRVEAETSFFSFNRDYFYLLQKHLGHKLFVCIVEYQDEIISAGLY
HHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCEEEEEEEEHHHHHHHCCHH
SECSGIVQGLLGGTTPEGLKLSPTSLEFYQTSLWAKQRGNTILHLGGGVGCSEDGLYQYK
HHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEH
ANFSKQRHEFYTASIIIKPLQYKLLLESHSKAHNIDLDHLNSIQFFPAYRYRPNPSEF
HHHHHHHHHHEEEEEEEECHHHHHHHHHCCCCCCCCHHHCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MDWRDPLWSDLLTHLSHDIYHLPEYLYCEALRTQSIPEAILITEGQKVCLIPYLRRSCNF
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCEEEEHHHHHCCCC
IPTASSPTNIYDITSPNGYSGFLLNPAALDDSAFGFHAWQQFLDLGKEQGICSAFLRLHP
CCCCCCCCCEEECCCCCCCCCEEECCHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCC
SLNTIHPQGINNILVKKVGHTVSINLGLSESDLWSHTHKSQRNKINRGKRLGLVAKIKPF
CCCCCCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCHH
SEYINEFCNIYEATMQRVEAETSFFSFNRDYFYLLQKHLGHKLFVCIVEYQDEIISAGLY
HHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCEEEEEEEEHHHHHHHCCHH
SECSGIVQGLLGGTTPEGLKLSPTSLEFYQTSLWAKQRGNTILHLGGGVGCSEDGLYQYK
HHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEH
ANFSKQRHEFYTASIIIKPLQYKLLLESHSKAHNIDLDHLNSIQFFPAYRYRPNPSEF
HHHHHHHHHHEEEEEEEECHHHHHHHHHCCCCCCCCHHHCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA