| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158333714
Identifier: 158333714
GI number: 158333714
Start: 492902
End: 493978
Strand: Direct
Name: 158333714
Synonym: AM1_0520
Alternate gene names: NA
Gene position: 492902-493978 (Clockwise)
Preceding gene: 158333713
Following gene: 158333715
Centisome position: 7.58
GC content: 42.06
Gene sequence:
>1077_bases TTGGATTGGCGCGATCCCTTATGGTCAGACCTGCTGACTCACCTGTCTCACGACATTTACCACTTACCTGAATATCTGTA TTGTGAGGCCCTGAGAACCCAAAGCATTCCAGAAGCAATCCTAATTACAGAGGGGCAAAAAGTCTGCCTAATTCCCTATC TACGACGGTCTTGCAATTTCATTCCAACAGCATCGTCCCCTACTAATATCTATGACATCACATCACCCAATGGGTATTCA GGATTTTTACTCAATCCAGCAGCCCTAGACGATTCAGCATTTGGCTTCCATGCTTGGCAGCAATTTCTTGACTTAGGAAA AGAACAGGGAATTTGCTCAGCGTTTCTTCGTCTTCACCCTAGTCTTAATACCATTCATCCCCAAGGGATAAATAATATCC TCGTCAAAAAAGTGGGGCATACGGTCTCCATTAACTTAGGGCTTTCAGAATCAGACCTCTGGAGTCATACCCATAAAAGC CAGCGAAACAAAATTAACCGAGGGAAACGACTGGGGTTAGTGGCAAAGATCAAGCCATTTTCTGAATACATCAATGAATT CTGCAACATCTATGAAGCTACGATGCAGCGGGTTGAAGCTGAGACCAGCTTTTTTTCATTTAATCGAGATTACTTTTACC TACTCCAAAAGCATCTTGGTCATAAACTATTCGTTTGTATTGTTGAATACCAAGATGAAATTATTTCTGCTGGACTCTAT TCGGAATGTTCGGGTATTGTCCAAGGACTATTAGGAGGGACAACCCCTGAAGGGCTAAAACTTTCTCCCACAAGCCTAGA GTTTTATCAAACGAGTCTATGGGCAAAGCAGCGGGGGAATACAATCCTTCATTTAGGCGGTGGAGTCGGTTGTTCTGAAG ATGGTCTTTATCAATACAAAGCAAACTTTTCGAAGCAAAGGCATGAGTTTTATACCGCATCTATCATTATTAAGCCGCTA CAATATAAACTGCTCCTTGAATCCCATTCAAAAGCGCATAACATTGATCTTGACCATTTAAACTCTATTCAGTTTTTCCC AGCTTACCGATATAGACCCAATCCCAGTGAGTTTTAG
Upstream 100 bases:
>100_bases GTTGTGTAGAACCCTCCCCAACGGCGATCCAGACTTTAGTGACCCGAGTGTTTTTCCAAAACTATGGTCAGAACCTTAAA CAGTAATGAAAAGCAAAGTA
Downstream 100 bases:
>100_bases AGATTAATCATTTTTTACCCAGTCTGAAAGATAAGTCATAGGTAAAATCGAAAATGGATGTGCAGATACTTGCATTAGAT GATCCTCGCTGGCTCCAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MDWRDPLWSDLLTHLSHDIYHLPEYLYCEALRTQSIPEAILITEGQKVCLIPYLRRSCNFIPTASSPTNIYDITSPNGYS GFLLNPAALDDSAFGFHAWQQFLDLGKEQGICSAFLRLHPSLNTIHPQGINNILVKKVGHTVSINLGLSESDLWSHTHKS QRNKINRGKRLGLVAKIKPFSEYINEFCNIYEATMQRVEAETSFFSFNRDYFYLLQKHLGHKLFVCIVEYQDEIISAGLY SECSGIVQGLLGGTTPEGLKLSPTSLEFYQTSLWAKQRGNTILHLGGGVGCSEDGLYQYKANFSKQRHEFYTASIIIKPL QYKLLLESHSKAHNIDLDHLNSIQFFPAYRYRPNPSEF
Sequences:
>Translated_358_residues MDWRDPLWSDLLTHLSHDIYHLPEYLYCEALRTQSIPEAILITEGQKVCLIPYLRRSCNFIPTASSPTNIYDITSPNGYS GFLLNPAALDDSAFGFHAWQQFLDLGKEQGICSAFLRLHPSLNTIHPQGINNILVKKVGHTVSINLGLSESDLWSHTHKS QRNKINRGKRLGLVAKIKPFSEYINEFCNIYEATMQRVEAETSFFSFNRDYFYLLQKHLGHKLFVCIVEYQDEIISAGLY SECSGIVQGLLGGTTPEGLKLSPTSLEFYQTSLWAKQRGNTILHLGGGVGCSEDGLYQYKANFSKQRHEFYTASIIIKPL QYKLLLESHSKAHNIDLDHLNSIQFFPAYRYRPNPSEF >Mature_358_residues MDWRDPLWSDLLTHLSHDIYHLPEYLYCEALRTQSIPEAILITEGQKVCLIPYLRRSCNFIPTASSPTNIYDITSPNGYS GFLLNPAALDDSAFGFHAWQQFLDLGKEQGICSAFLRLHPSLNTIHPQGINNILVKKVGHTVSINLGLSESDLWSHTHKS QRNKINRGKRLGLVAKIKPFSEYINEFCNIYEATMQRVEAETSFFSFNRDYFYLLQKHLGHKLFVCIVEYQDEIISAGLY SECSGIVQGLLGGTTPEGLKLSPTSLEFYQTSLWAKQRGNTILHLGGGVGCSEDGLYQYKANFSKQRHEFYTASIIIKPL QYKLLLESHSKAHNIDLDHLNSIQFFPAYRYRPNPSEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40807; Mature: 40807
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWRDPLWSDLLTHLSHDIYHLPEYLYCEALRTQSIPEAILITEGQKVCLIPYLRRSCNF CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCEEEEHHHHHCCCC IPTASSPTNIYDITSPNGYSGFLLNPAALDDSAFGFHAWQQFLDLGKEQGICSAFLRLHP CCCCCCCCCEEECCCCCCCCCEEECCHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCC SLNTIHPQGINNILVKKVGHTVSINLGLSESDLWSHTHKSQRNKINRGKRLGLVAKIKPF CCCCCCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCHH SEYINEFCNIYEATMQRVEAETSFFSFNRDYFYLLQKHLGHKLFVCIVEYQDEIISAGLY HHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCEEEEEEEEHHHHHHHCCHH SECSGIVQGLLGGTTPEGLKLSPTSLEFYQTSLWAKQRGNTILHLGGGVGCSEDGLYQYK HHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEH ANFSKQRHEFYTASIIIKPLQYKLLLESHSKAHNIDLDHLNSIQFFPAYRYRPNPSEF HHHHHHHHHHEEEEEEEECHHHHHHHHHCCCCCCCCHHHCCCEEECCCCCCCCCCCCC >Mature Secondary Structure MDWRDPLWSDLLTHLSHDIYHLPEYLYCEALRTQSIPEAILITEGQKVCLIPYLRRSCNF CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCEEEEHHHHHCCCC IPTASSPTNIYDITSPNGYSGFLLNPAALDDSAFGFHAWQQFLDLGKEQGICSAFLRLHP CCCCCCCCCEEECCCCCCCCCEEECCHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCC SLNTIHPQGINNILVKKVGHTVSINLGLSESDLWSHTHKSQRNKINRGKRLGLVAKIKPF CCCCCCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCHH SEYINEFCNIYEATMQRVEAETSFFSFNRDYFYLLQKHLGHKLFVCIVEYQDEIISAGLY HHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCEEEEEEEEHHHHHHHCCHH SECSGIVQGLLGGTTPEGLKLSPTSLEFYQTSLWAKQRGNTILHLGGGVGCSEDGLYQYK HHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEH ANFSKQRHEFYTASIIIKPLQYKLLLESHSKAHNIDLDHLNSIQFFPAYRYRPNPSEF HHHHHHHHHHEEEEEEEECHHHHHHHHHCCCCCCCCHHHCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA