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The map label for this gene is phyH

Identifier: 158333713

GI number: 158333713

Start: 491960

End: 492880

Strand: Direct

Name: phyH

Synonym: AM1_0519

Alternate gene names: NA

Gene position: 491960-492880 (Clockwise)

Preceding gene: 158333712

Following gene: 158333714

Centisome position: 7.56

GC content: 50.27

Gene sequence:

>921_bases
ATGAGGCCTCAAGCCCTATCCACCATGCAATGGGAGCCTCTGGAGCAATCCTTAAGTGCCCAGCAACGAGCTCTGCTACC
CACGGACCAAGATATTGCTTTCTATCGTCAGCATGGCTGGTTTGTTACTCCACCTGTTATCTCGGATGACATTATAGAGC
AAGCTATTGCGGGAGCAGAACGCTACTATCAGGGGGAGCGAGATGCGGTTCTTCCCGTCAACGAAGGTTTCAGTGATTGG
CAGCCCAGGGATGGTTTGGACCTGGTGCGCAATAACGAGTTTGTATCTCTACAAAGTCAAGCCCTGAGACAACTGGCACT
CCAGCCGGTGGTGGGAGCAATTGCTGCAAAATTAGCAGGTACTCAACAAATCCGACTTCTGGATGATCAACTGGTTTACA
AGCCCCCTCAAGATCACACTGCCCAAACGAGCGTCGGTTGGCATGCGGATCGGGCCTACTGGGCCAACTGCACCTCAGAT
CAGTTGCTGACTGCTTGGATCCCTTTTCATGATTGTGATATTGATATGGGGCCGTTAGTTGTTATTGATGGTAGTCATCA
ATGGTCAGGCTTAGAGCATTTGCGAGGATTTCATCGGACAGACCTAACTCAGCTATCGGCGCAACTCCAACAGATGGGGA
TCGACCATTCGATCAAAGAAATTCCTCTCGCCCTACGGAAAGGCCAAGTCAGCTTCCATAACTGTTGGACCATCCATGGC
AGCTACCCAAACCGTAGTCAACGAACCCGACTTGCGATCGCAGTACATCTTCAAGATGCAGCCAACCACTATCGCCCCTA
CCAGAATGACCAAGGTCAAGCCATTCATATGTTTGACGAACAGTTGTGTAGAACCCTCCCCAACGGCGATCCAGACTTTA
GTGACCCGAGTGTTTTTCCAAAACTATGGTCAGAACCTTAA

Upstream 100 bases:

>100_bases
GTAAAATCTTGGCCCTGACTGTGTGGAAAGTTTTGAAGCGAGATGGCATTAACCAAGAGGGCTTTGCGACCTCAGAAGAG
TTTATGGGGACCCTAGATCC

Downstream 100 bases:

>100_bases
ACAGTAATGAAAAGCAAAGTATTGGATTGGCGCGATCCCTTATGGTCAGACCTGCTGACTCACCTGTCTCACGACATTTA
CCACTTACCTGAATATCTGT

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: Deoxygenase; L-Proline 4-Hydroxylase; Phytanoyl-CoA Dioxygenase Family Protein

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MRPQALSTMQWEPLEQSLSAQQRALLPTDQDIAFYRQHGWFVTPPVISDDIIEQAIAGAERYYQGERDAVLPVNEGFSDW
QPRDGLDLVRNNEFVSLQSQALRQLALQPVVGAIAAKLAGTQQIRLLDDQLVYKPPQDHTAQTSVGWHADRAYWANCTSD
QLLTAWIPFHDCDIDMGPLVVIDGSHQWSGLEHLRGFHRTDLTQLSAQLQQMGIDHSIKEIPLALRKGQVSFHNCWTIHG
SYPNRSQRTRLAIAVHLQDAANHYRPYQNDQGQAIHMFDEQLCRTLPNGDPDFSDPSVFPKLWSEP

Sequences:

>Translated_306_residues
MRPQALSTMQWEPLEQSLSAQQRALLPTDQDIAFYRQHGWFVTPPVISDDIIEQAIAGAERYYQGERDAVLPVNEGFSDW
QPRDGLDLVRNNEFVSLQSQALRQLALQPVVGAIAAKLAGTQQIRLLDDQLVYKPPQDHTAQTSVGWHADRAYWANCTSD
QLLTAWIPFHDCDIDMGPLVVIDGSHQWSGLEHLRGFHRTDLTQLSAQLQQMGIDHSIKEIPLALRKGQVSFHNCWTIHG
SYPNRSQRTRLAIAVHLQDAANHYRPYQNDQGQAIHMFDEQLCRTLPNGDPDFSDPSVFPKLWSEP
>Mature_306_residues
MRPQALSTMQWEPLEQSLSAQQRALLPTDQDIAFYRQHGWFVTPPVISDDIIEQAIAGAERYYQGERDAVLPVNEGFSDW
QPRDGLDLVRNNEFVSLQSQALRQLALQPVVGAIAAKLAGTQQIRLLDDQLVYKPPQDHTAQTSVGWHADRAYWANCTSD
QLLTAWIPFHDCDIDMGPLVVIDGSHQWSGLEHLRGFHRTDLTQLSAQLQQMGIDHSIKEIPLALRKGQVSFHNCWTIHG
SYPNRSQRTRLAIAVHLQDAANHYRPYQNDQGQAIHMFDEQLCRTLPNGDPDFSDPSVFPKLWSEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:
GO:0016702: Phytanoyl-CoA dioxygenase (PhyH), putative

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34734; Mature: 34734

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPQALSTMQWEPLEQSLSAQQRALLPTDQDIAFYRQHGWFVTPPVISDDIIEQAIAGAE
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHECCCCEECCCCCCHHHHHHHHHHHH
RYYQGERDAVLPVNEGFSDWQPRDGLDLVRNNEFVSLQSQALRQLALQPVVGAIAAKLAG
HHHCCCCCEEEECCCCCCCCCCCCCCHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCC
TQQIRLLDDQLVYKPPQDHTAQTSVGWHADRAYWANCTSDQLLTAWIPFHDCDIDMGPLV
CCEEEEECCHHEECCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCCCEE
VIDGSHQWSGLEHLRGFHRTDLTQLSAQLQQMGIDHSIKEIPLALRKGQVSFHNCWTIHG
EEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEEEEC
SYPNRSQRTRLAIAVHLQDAANHYRPYQNDQGQAIHMFDEQLCRTLPNGDPDFSDPSVFP
CCCCCCCCEEEEEEEEEEHHHHHCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCC
KLWSEP
HHCCCC
>Mature Secondary Structure
MRPQALSTMQWEPLEQSLSAQQRALLPTDQDIAFYRQHGWFVTPPVISDDIIEQAIAGAE
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHECCCCEECCCCCCHHHHHHHHHHHH
RYYQGERDAVLPVNEGFSDWQPRDGLDLVRNNEFVSLQSQALRQLALQPVVGAIAAKLAG
HHHCCCCCEEEECCCCCCCCCCCCCCHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCC
TQQIRLLDDQLVYKPPQDHTAQTSVGWHADRAYWANCTSDQLLTAWIPFHDCDIDMGPLV
CCEEEEECCHHEECCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCCCEE
VIDGSHQWSGLEHLRGFHRTDLTQLSAQLQQMGIDHSIKEIPLALRKGQVSFHNCWTIHG
EEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEEEEC
SYPNRSQRTRLAIAVHLQDAANHYRPYQNDQGQAIHMFDEQLCRTLPNGDPDFSDPSVFP
CCCCCCCCEEEEEEEEEEHHHHHCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCC
KLWSEP
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA