| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158319044
Identifier: 158319044
GI number: 158319044
Start: 8962181
End: 8963800
Strand: Direct
Name: 158319044
Synonym: Franean1_7327
Alternate gene names: NA
Gene position: 8962181-8963800 (Clockwise)
Preceding gene: 158319043
Following gene: 158319045
Centisome position: 99.78
GC content: 76.11
Gene sequence:
>1620_bases GTGGTGACGGACGAACACGGTGCCCACGCCCCTGATCCGGGCTGGCGCCCCGGCGACCGTGGCCCGCGTACCCGGGCCGG CACAGCCGCCCAGCGCATGACCGACGGTCGCACCACCGGCGGGCATCCCGACGTGGAGGCGCTTGACGCCTACCTCGACG CCCGGCCGGACCCTTCGGATCAGGGGTTCCCCCTCGAGCCCGCGGCCGCCCGGGTCGAGCGCCACGTCCACTCGTGTGCC ACCTGCCAGGAGGCGCTCACGGCGCTGCGCCGGGTGCGTGCCGACCTCGCCCGCCTCGCGAGCATGACGATGCCGGCCGA CGTCGCCGAGCGCATCCAGGCCGCGCTGGCCGCCAGGTCGGCCACGGACACCCGGGCACGGGAGAGCACCCGGTCGGGGC GCGGTCCCCGCGCGGGAGCTGTCGGCGGCCCGCCGCGGCCACGCCGCCGCCTCGGGCGGGTCGGCTCGCTTCCAGCCTCG GGCCTCGTCGCCCCTGGCGAGTTCGAGCGGAAGAGCACTCCGGGCAACGCAGGCCGAGGCACCGCTGACACAGGTCCCGA CGCGGCCGACCACGGCTCAGGCATCGCCGAACAGGGGACCGCCGGGCCAGGCATCGGCGAACCAACCATCTCGGCACCAG ACACCAGGACTCCAGACACCAGGACTCCGGGCACCAGGGCGCCAGACACGACGGCGCCGGGCATCGCCGAGCAGGACATC GCCCAGCAGGACATCGCCCAGCAGGACATCGCCGAGCCGGACATCGCGGCACACGGCACCACACGGGGGAACACGGAGCC GGGCAGGCCGCCGATCTCCGGGGTGCCGCGGCCCCCGCGGCACGGCGGCGGGCGGCGGCGCGGCGGGCTCGCCGGTGCCG GCGGCCGGGTCGCCCGCGACTGGGTCTCGATCGCGGCGACCTGCGTCGCGCTGGTGGCGTTCGGCGCGGCTGTGCTGACC CTGCGCGGGCTGACCGCGGGCGGCGGGGATGCGAGCTCCACCGCGGCCAGCGACGCGGCCACCGCGCTGTCAGGGGCCTC CCAGACGGCCGGTCCGGAAGCCGCCCGGGCCCCCGGACCGACCGCCGCCGCGGCCGTCCCCAATGCCAGTGGGACGCCCG AGGAGCCGTCCGCGGCCTTCACGATGGTCGCCGACTCGGGAGAGGCGGTCCGGGCCGGCGACATCGTCGTGCACGGCCGG AGCCTGCTCACCGGGCGGATCCCGACGACCATGCTCACCTGGTCCGTCCTGCCTGCGCTTTCTGGTGCGACGTCCGTGCC GCCCGCCGCGGGCGAGGAACAGGCCACCGATGACGGCGCGTCCACCACGGTGCCGGGAACGGATCCGTCGGCCGCGTCCG CCACGACGCCGGAGACGCTCGCCCGCGTGATCGACACCCCACAGCTGCGGATGTGCTACGACAGCCTCACCGCCCAGACG GGCGGATCGGTACTGGCCCTCGACCGGGTGAGCTTCGACGGCCAACGGGCGCTGCTGGTGGTGCTCTCGGTCGCCGGCCA GCCCGCCGCCGCGCGGGTCGTCGTGATCGACGCACGCTGCGGCGTGGTACCGATGCCGGGCGCGGTGTTGTACACCGTGA ACACGACCCGCGCGCTGTAG
Upstream 100 bases:
>100_bases CGAACCCGCCGAGATGCCGGGCGCGGCCGGCGTCCCGGGACCCGCCGACCGGACCGGCACGACGGCCGGGCGGCTGACTC GCCGGAGGAGGTGATCGGCG
Downstream 100 bases:
>100_bases GCGGTGGTCGGCCACAGGACGGCACACACGTACGGACGGGCACACCCCCTTGCCACGGTGACCCAGCGGTGGAATCAGCC GCGGTCCGCGACGGTTATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 539; Mature: 539
Protein sequence:
>539_residues MVTDEHGAHAPDPGWRPGDRGPRTRAGTAAQRMTDGRTTGGHPDVEALDAYLDARPDPSDQGFPLEPAAARVERHVHSCA TCQEALTALRRVRADLARLASMTMPADVAERIQAALAARSATDTRARESTRSGRGPRAGAVGGPPRPRRRLGRVGSLPAS GLVAPGEFERKSTPGNAGRGTADTGPDAADHGSGIAEQGTAGPGIGEPTISAPDTRTPDTRTPGTRAPDTTAPGIAEQDI AQQDIAQQDIAEPDIAAHGTTRGNTEPGRPPISGVPRPPRHGGGRRRGGLAGAGGRVARDWVSIAATCVALVAFGAAVLT LRGLTAGGGDASSTAASDAATALSGASQTAGPEAARAPGPTAAAAVPNASGTPEEPSAAFTMVADSGEAVRAGDIVVHGR SLLTGRIPTTMLTWSVLPALSGATSVPPAAGEEQATDDGASTTVPGTDPSAASATTPETLARVIDTPQLRMCYDSLTAQT GGSVLALDRVSFDGQRALLVVLSVAGQPAAARVVVIDARCGVVPMPGAVLYTVNTTRAL
Sequences:
>Translated_539_residues MVTDEHGAHAPDPGWRPGDRGPRTRAGTAAQRMTDGRTTGGHPDVEALDAYLDARPDPSDQGFPLEPAAARVERHVHSCA TCQEALTALRRVRADLARLASMTMPADVAERIQAALAARSATDTRARESTRSGRGPRAGAVGGPPRPRRRLGRVGSLPAS GLVAPGEFERKSTPGNAGRGTADTGPDAADHGSGIAEQGTAGPGIGEPTISAPDTRTPDTRTPGTRAPDTTAPGIAEQDI AQQDIAQQDIAEPDIAAHGTTRGNTEPGRPPISGVPRPPRHGGGRRRGGLAGAGGRVARDWVSIAATCVALVAFGAAVLT LRGLTAGGGDASSTAASDAATALSGASQTAGPEAARAPGPTAAAAVPNASGTPEEPSAAFTMVADSGEAVRAGDIVVHGR SLLTGRIPTTMLTWSVLPALSGATSVPPAAGEEQATDDGASTTVPGTDPSAASATTPETLARVIDTPQLRMCYDSLTAQT GGSVLALDRVSFDGQRALLVVLSVAGQPAAARVVVIDARCGVVPMPGAVLYTVNTTRAL >Mature_539_residues MVTDEHGAHAPDPGWRPGDRGPRTRAGTAAQRMTDGRTTGGHPDVEALDAYLDARPDPSDQGFPLEPAAARVERHVHSCA TCQEALTALRRVRADLARLASMTMPADVAERIQAALAARSATDTRARESTRSGRGPRAGAVGGPPRPRRRLGRVGSLPAS GLVAPGEFERKSTPGNAGRGTADTGPDAADHGSGIAEQGTAGPGIGEPTISAPDTRTPDTRTPGTRAPDTTAPGIAEQDI AQQDIAQQDIAEPDIAAHGTTRGNTEPGRPPISGVPRPPRHGGGRRRGGLAGAGGRVARDWVSIAATCVALVAFGAAVLT LRGLTAGGGDASSTAASDAATALSGASQTAGPEAARAPGPTAAAAVPNASGTPEEPSAAFTMVADSGEAVRAGDIVVHGR SLLTGRIPTTMLTWSVLPALSGATSVPPAAGEEQATDDGASTTVPGTDPSAASATTPETLARVIDTPQLRMCYDSLTAQT GGSVLALDRVSFDGQRALLVVLSVAGQPAAARVVVIDARCGVVPMPGAVLYTVNTTRAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54295; Mature: 54295
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTDEHGAHAPDPGWRPGDRGPRTRAGTAAQRMTDGRTTGGHPDVEALDAYLDARPDPSD CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCC QGFPLEPAAARVERHVHSCATCQEALTALRRVRADLARLASMTMPADVAERIQAALAARS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC ATDTRARESTRSGRGPRAGAVGGPPRPRRRLGRVGSLPASGLVAPGEFERKSTPGNAGRG CHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TADTGPDAADHGSGIAEQGTAGPGIGEPTISAPDTRTPDTRTPGTRAPDTTAPGIAEQDI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH AQQDIAQQDIAEPDIAAHGTTRGNTEPGRPPISGVPRPPRHGGGRRRGGLAGAGGRVARD HHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH WVSIAATCVALVAFGAAVLTLRGLTAGGGDASSTAASDAATALSGASQTAGPEAARAPGP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCC TAAAAVPNASGTPEEPSAAFTMVADSGEAVRAGDIVVHGRSLLTGRIPTTMLTWSVLPAL CHHHCCCCCCCCCCCCCCEEEEEECCCCEEEECCEEEECCHHHCCCCCHHHHHHHHHHHH SGATSVPPAAGEEQATDDGASTTVPGTDPSAASATTPETLARVIDTPQLRMCYDSLTAQT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHC GGSVLALDRVSFDGQRALLVVLSVAGQPAAARVVVIDARCGVVPMPGAVLYTVNTTRAL CCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCEECCCEEEEEECHHHCC >Mature Secondary Structure MVTDEHGAHAPDPGWRPGDRGPRTRAGTAAQRMTDGRTTGGHPDVEALDAYLDARPDPSD CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCC QGFPLEPAAARVERHVHSCATCQEALTALRRVRADLARLASMTMPADVAERIQAALAARS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC ATDTRARESTRSGRGPRAGAVGGPPRPRRRLGRVGSLPASGLVAPGEFERKSTPGNAGRG CHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TADTGPDAADHGSGIAEQGTAGPGIGEPTISAPDTRTPDTRTPGTRAPDTTAPGIAEQDI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH AQQDIAQQDIAEPDIAAHGTTRGNTEPGRPPISGVPRPPRHGGGRRRGGLAGAGGRVARD HHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH WVSIAATCVALVAFGAAVLTLRGLTAGGGDASSTAASDAATALSGASQTAGPEAARAPGP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCC TAAAAVPNASGTPEEPSAAFTMVADSGEAVRAGDIVVHGRSLLTGRIPTTMLTWSVLPAL CHHHCCCCCCCCCCCCCCEEEEEECCCCEEEECCEEEECCHHHCCCCCHHHHHHHHHHHH SGATSVPPAAGEEQATDDGASTTVPGTDPSAASATTPETLARVIDTPQLRMCYDSLTAQT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHC GGSVLALDRVSFDGQRALLVVLSVAGQPAAARVVVIDARCGVVPMPGAVLYTVNTTRAL CCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCEECCCEEEEEECHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA