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The map label for this gene is dnaB [H]

Identifier: 158319025

GI number: 158319025

Start: 8932112

End: 8933470

Strand: Reverse

Name: dnaB [H]

Synonym: Franean1_7308

Alternate gene names: 158319025

Gene position: 8933470-8932112 (Counterclockwise)

Preceding gene: 158319026

Following gene: 158319024

Centisome position: 99.46

GC content: 70.13

Gene sequence:

>1359_bases
TTGAGCGTCGCCGACATCGCGCGCGGGCCTGGATCCGCGGTCGAGTTCGATCGCACCCCGCCCCACGATCTTCCTGCGGA
GCAGAGCGTGCTGGGGGGCATGCTGCTCTCGAAAGACGCGATCGCGGACGTCGTCGAGGTCCTCCGGGCGAGCGACTTCT
ACCGGCCGGCGCACGCCACCGTCTACACCACGATCGGCGACCTCTACGGCCGTGGGGAGCCGGCCGACGTCATCAGCGTC
GCGGCCGAGCTGGGCCGGCAGAACCTGCTGGAGCGGGTCGGCGGGCCGGCCTACATGCACACGCTGATCTCCAGCGTCCC
GACCGCGGCGAACGCCGGCTACTACGCGCGCATCGTCGCGGAGAAGGCCGTGCTGCGCCGGCTGGCCGAGGCCGGCACGC
GCATCGTGCAGCTCGCCTACGGCCCGGCGCCCGACGTCACCGACGTCGTCGACCGGGCCCAGGCGGCCGTCTACGAGGTG
ACCGAGCGGCGCACGAACGATGACTACACCCCGCTCGGCGAGTTGCTGAACCCGGCGCTGGAGGAGATCGAGGCGATCCA
GGCCCACGACGGCGCCCTGACCGGGGTGCCGACGGGGTTCACCGACCTCGACGAGCTCACCAACGGCCTGCACGGCGGCC
AGCTGTGGATCGTCGCGGCCCGGCCCGCGGTCGGCAAGTCGACCCTGGGCCTGGATTTCGCCCGCGCCGCGTCGATCAAG
AACGGGATGACCTCGGTCGTCTTCTCGCTGGAGATGAGCCGCATGGAGATCACCATGCGGCTGCTCTCCGCCGAGGCCCG
GGTGTCGCTGCAGAACATCCGCACCGGTCGGCTGACCGACGACGACTGGGGTCGGCTGGCCCGGCGGATGGGGGAGGTCG
CCGAGGCACCGCTGTACATCGACGACAGCCCGCACCTGACGATGATGGAGATCCGGGCGAAGGCGCGGCGGCTCAAGCAG
CGCAACGACCTGCGGCTGGTCATCCTCGACTACCTGCAGCTGATGTCCTCGCCGAAGAAGGTCGAGAGCCGCCAGCAGGA
GGTCAGCGAGATCTCCCGGTCGCTGAAGCTGCTCGCGAAGGAGCTGGAGGTCCCCGTCGTGGCCATCTCGCAGCTCAACC
GGGCCTCCGAACAACGGGCCGACAAACGGCCCCAGGTCTCCGACCTGCGCGAGTCCGGCAGCCTCGAGCAGGACGCCGAC
GCGGTCATCCTGCTCTACCGGGAGGACACGGTGGAGAAGGAGTCCGCGCGGGCCGGCGAGGCCGATCTGATCATCGCCAA
GCACCGTAACGGCCCCACAGGCACCGTCACGGTCGCCTTCCAGGGCCACTACTCCCGGTTCGTCGACATGGCCAACTGA

Upstream 100 bases:

>100_bases
GGGAGGGATCGGGTCGGGAGCTTCCGGCGCACGGCGCTGCTCCGATCGCCCGGTCGCGGCGGTGCGCAGGTGGGCCGGTC
GACATCCGAGAGGGGGAGGC

Downstream 100 bases:

>100_bases
TCACGCCGTGATCCGGTGGGAGGGCGGCCGCCCGCTGCGGTCGGGTCGACTGGCCCGATCGGACTGGTCGGCGGGCCGAC
CGGCCTGAAGAGCCGGCCCC

Product: replicative DNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MSVADIARGPGSAVEFDRTPPHDLPAEQSVLGGMLLSKDAIADVVEVLRASDFYRPAHATVYTTIGDLYGRGEPADVISV
AAELGRQNLLERVGGPAYMHTLISSVPTAANAGYYARIVAEKAVLRRLAEAGTRIVQLAYGPAPDVTDVVDRAQAAVYEV
TERRTNDDYTPLGELLNPALEEIEAIQAHDGALTGVPTGFTDLDELTNGLHGGQLWIVAARPAVGKSTLGLDFARAASIK
NGMTSVVFSLEMSRMEITMRLLSAEARVSLQNIRTGRLTDDDWGRLARRMGEVAEAPLYIDDSPHLTMMEIRAKARRLKQ
RNDLRLVILDYLQLMSSPKKVESRQQEVSEISRSLKLLAKELEVPVVAISQLNRASEQRADKRPQVSDLRESGSLEQDAD
AVILLYREDTVEKESARAGEADLIIAKHRNGPTGTVTVAFQGHYSRFVDMAN

Sequences:

>Translated_452_residues
MSVADIARGPGSAVEFDRTPPHDLPAEQSVLGGMLLSKDAIADVVEVLRASDFYRPAHATVYTTIGDLYGRGEPADVISV
AAELGRQNLLERVGGPAYMHTLISSVPTAANAGYYARIVAEKAVLRRLAEAGTRIVQLAYGPAPDVTDVVDRAQAAVYEV
TERRTNDDYTPLGELLNPALEEIEAIQAHDGALTGVPTGFTDLDELTNGLHGGQLWIVAARPAVGKSTLGLDFARAASIK
NGMTSVVFSLEMSRMEITMRLLSAEARVSLQNIRTGRLTDDDWGRLARRMGEVAEAPLYIDDSPHLTMMEIRAKARRLKQ
RNDLRLVILDYLQLMSSPKKVESRQQEVSEISRSLKLLAKELEVPVVAISQLNRASEQRADKRPQVSDLRESGSLEQDAD
AVILLYREDTVEKESARAGEADLIIAKHRNGPTGTVTVAFQGHYSRFVDMAN
>Mature_451_residues
SVADIARGPGSAVEFDRTPPHDLPAEQSVLGGMLLSKDAIADVVEVLRASDFYRPAHATVYTTIGDLYGRGEPADVISVA
AELGRQNLLERVGGPAYMHTLISSVPTAANAGYYARIVAEKAVLRRLAEAGTRIVQLAYGPAPDVTDVVDRAQAAVYEVT
ERRTNDDYTPLGELLNPALEEIEAIQAHDGALTGVPTGFTDLDELTNGLHGGQLWIVAARPAVGKSTLGLDFARAASIKN
GMTSVVFSLEMSRMEITMRLLSAEARVSLQNIRTGRLTDDDWGRLARRMGEVAEAPLYIDDSPHLTMMEIRAKARRLKQR
NDLRLVILDYLQLMSSPKKVESRQQEVSEISRSLKLLAKELEVPVVAISQLNRASEQRADKRPQVSDLRESGSLEQDADA
VILLYREDTVEKESARAGEADLIIAKHRNGPTGTVTVAFQGHYSRFVDMAN

Specific function: Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity [H]

COG id: COG0305

COG function: function code L; Replicative DNA helicase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SF4 helicase domain [H]

Homologues:

Organism=Escherichia coli, GI1790486, Length=441, Percent_Identity=44.671201814059, Blast_Score=361, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007692
- InterPro:   IPR007694
- InterPro:   IPR007693
- InterPro:   IPR016136 [H]

Pfam domain/function: PF00772 DnaB; PF03796 DnaB_C [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 49354; Mature: 49222

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVADIARGPGSAVEFDRTPPHDLPAEQSVLGGMLLSKDAIADVVEVLRASDFYRPAHAT
CCCHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VYTTIGDLYGRGEPADVISVAAELGRQNLLERVGGPAYMHTLISSVPTAANAGYYARIVA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHH
EKAVLRRLAEAGTRIVQLAYGPAPDVTDVVDRAQAAVYEVTERRTNDDYTPLGELLNPAL
HHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
EEIEAIQAHDGALTGVPTGFTDLDELTNGLHGGQLWIVAARPAVGKSTLGLDFARAASIK
HHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHH
NGMTSVVFSLEMSRMEITMRLLSAEARVSLQNIRTGRLTDDDWGRLARRMGEVAEAPLYI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEE
DDSPHLTMMEIRAKARRLKQRNDLRLVILDYLQLMSSPKKVESRQQEVSEISRSLKLLAK
CCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ELEVPVVAISQLNRASEQRADKRPQVSDLRESGSLEQDADAVILLYREDTVEKESARAGE
HHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCHHHCCCCC
ADLIIAKHRNGPTGTVTVAFQGHYSRFVDMAN
CEEEEEECCCCCCCEEEEEECCHHHHHHCCCC
>Mature Secondary Structure 
SVADIARGPGSAVEFDRTPPHDLPAEQSVLGGMLLSKDAIADVVEVLRASDFYRPAHAT
CCHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VYTTIGDLYGRGEPADVISVAAELGRQNLLERVGGPAYMHTLISSVPTAANAGYYARIVA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHH
EKAVLRRLAEAGTRIVQLAYGPAPDVTDVVDRAQAAVYEVTERRTNDDYTPLGELLNPAL
HHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
EEIEAIQAHDGALTGVPTGFTDLDELTNGLHGGQLWIVAARPAVGKSTLGLDFARAASIK
HHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHH
NGMTSVVFSLEMSRMEITMRLLSAEARVSLQNIRTGRLTDDDWGRLARRMGEVAEAPLYI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEE
DDSPHLTMMEIRAKARRLKQRNDLRLVILDYLQLMSSPKKVESRQQEVSEISRSLKLLAK
CCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ELEVPVVAISQLNRASEQRADKRPQVSDLRESGSLEQDADAVILLYREDTVEKESARAGE
HHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCHHHCCCCC
ADLIIAKHRNGPTGTVTVAFQGHYSRFVDMAN
CEEEEEECCCCCCCEEEEEECCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA