Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318987

Identifier: 158318987

GI number: 158318987

Start: 8875357

End: 8875593

Strand: Direct

Name: 158318987

Synonym: Franean1_7270

Alternate gene names: NA

Gene position: 8875357-8875593 (Clockwise)

Preceding gene: 158318986

Following gene: 158318989

Centisome position: 98.81

GC content: 70.04

Gene sequence:

>237_bases
ATGACGCGCGTGGAGGCTCTGCAGGCCGCCGACGAGTTCGTCGCGAAGGTTCTGACCTCCGCCAGCACCAGCGGCCGGTT
CAACGGGGCGCTCAACCTGGCCGAGCGCGTGGACCTCACGCTGCGGGTCGCCCGGTTCCTTCTCGAGGGCCAGTCGTCCT
CCGAGGCCGACGACCTGCTCAAGCGGGACATGCGCAACGAGCTCGACCAGGCGTTCCCGCCGCTGCGCACCACCTGA

Upstream 100 bases:

>100_bases
GGACGCATAGGGGTGCACAACGGAGACAGGTGTCCTGCCTGGTACGGTTGCGCCTCACACCCGGCATCCGGCTCAACTTC
CACCACGAAGAGGTGAACGC

Downstream 100 bases:

>100_bases
GCCAGCCGGCCCCTACCTGAATCCGGGCCCGTACCGGGATGCCCGCGTGTCGTCACCTGTCGTCGGACGACTGCAGCGGC
CGGTGCAGCACACCGCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 78; Mature: 77

Protein sequence:

>78_residues
MTRVEALQAADEFVAKVLTSASTSGRFNGALNLAERVDLTLRVARFLLEGQSSSEADDLLKRDMRNELDQAFPPLRTT

Sequences:

>Translated_78_residues
MTRVEALQAADEFVAKVLTSASTSGRFNGALNLAERVDLTLRVARFLLEGQSSSEADDLLKRDMRNELDQAFPPLRTT
>Mature_77_residues
TRVEALQAADEFVAKVLTSASTSGRFNGALNLAERVDLTLRVARFLLEGQSSSEADDLLKRDMRNELDQAFPPLRTT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8626; Mature: 8495

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRVEALQAADEFVAKVLTSASTSGRFNGALNLAERVDLTLRVARFLLEGQSSSEADDLL
CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
KRDMRNELDQAFPPLRTT
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TRVEALQAADEFVAKVLTSASTSGRFNGALNLAERVDLTLRVARFLLEGQSSSEADDLL
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
KRDMRNELDQAFPPLRTT
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA