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The map label for this gene is ycnI [H]

Identifier: 158318959

GI number: 158318959

Start: 8844667

End: 8845410

Strand: Reverse

Name: ycnI [H]

Synonym: Franean1_7242

Alternate gene names: 158318959

Gene position: 8845410-8844667 (Counterclockwise)

Preceding gene: 158318960

Following gene: 158318958

Centisome position: 98.48

GC content: 73.79

Gene sequence:

>744_bases
ATGTCCCGCACCATCCGCACAGCCCGGCTCCGCCGTGGGGTCCTGTGCGCGCTCGCCGCCGCGGCGGGCACCATCGCGCT
CGCCGTGCCGGCGTCCGCACACGTCACCGTGTCGCCGGCGGAGGCGGCCGCGGGCGGCTACGCGACCCTGTCGTTCAAGG
TGCCGACCGAGAGCGACACGGCGTCCACCACCGGGATCGACGTGCAGTTCCCGACCGACGCGCCGATCGCGTCGGTCACC
GTCCAGCCCAAGCCCGGCTGGACGTACAAGGTCACCAAGGGCGCGCCGCCGGCGCCGCTCACCGTGCATGGCAGCCAGGT
CAGCGAGATCGTCACCCGGATCACCTGGACGGCGCAGGACGGCGGCGGCATCAAGCCGGGCGAGTTCGACACCTTCAGCG
TCTCGGCCGGCCCGCTGCCGGAGAAGGGCGACCAGGTCGTCTTCAAGACCTTGCAGACCTACTCGGACGGCGAGGTTGTC
CGCTGGGTCGATGTCGCGGCGGCGGGTGCCGCCGAGCCGGAGCACCCGGCGCCGACGGTCACGCTGACCGCCGCCGCGGC
AGCCGGCCACGACGACGACGGTGACGGCGACGACACCGCCAGCATCGAGTACACGGCCGCCACGGAATCGGACTCCACGT
CGGACGGCACGGCGCGCGCGCTCGGGATCACCGGGCTCGTGCTGGGAGTCCTCGGGCTGGCCGCCGGGGCCTTCGCACTG
ATCACGACCCGCCGGCGGGCCTGA

Upstream 100 bases:

>100_bases
TCGCGTCGGCGCCGCCGGCCGTGCCGAGACGACCCCGGTGCTCGGGTCAGCAAATCCGATCACCAACGGAAGGCCCGACC
GGCCTTCGAGGAGGACTCCG

Downstream 100 bases:

>100_bases
CCCCGCGGGGTGCCTCCCACCAGCCGGTGGGAGGCACCCCGCACTTGCCGACACCGGCCGGCCGGGGTGGCACCCCCGCC
TGGGCGGAACATCACCCGGA

Product: nuclear export factor GLE1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSRTIRTARLRRGVLCALAAAAGTIALAVPASAHVTVSPAEAAAGGYATLSFKVPTESDTASTTGIDVQFPTDAPIASVT
VQPKPGWTYKVTKGAPPAPLTVHGSQVSEIVTRITWTAQDGGGIKPGEFDTFSVSAGPLPEKGDQVVFKTLQTYSDGEVV
RWVDVAAAGAAEPEHPAPTVTLTAAAAAGHDDDGDGDDTASIEYTAATESDSTSDGTARALGITGLVLGVLGLAAGAFAL
ITTRRRA

Sequences:

>Translated_247_residues
MSRTIRTARLRRGVLCALAAAAGTIALAVPASAHVTVSPAEAAAGGYATLSFKVPTESDTASTTGIDVQFPTDAPIASVT
VQPKPGWTYKVTKGAPPAPLTVHGSQVSEIVTRITWTAQDGGGIKPGEFDTFSVSAGPLPEKGDQVVFKTLQTYSDGEVV
RWVDVAAAGAAEPEHPAPTVTLTAAAAAGHDDDGDGDDTASIEYTAATESDSTSDGTARALGITGLVLGVLGLAAGAFAL
ITTRRRA
>Mature_246_residues
SRTIRTARLRRGVLCALAAAAGTIALAVPASAHVTVSPAEAAAGGYATLSFKVPTESDTASTTGIDVQFPTDAPIASVTV
QPKPGWTYKVTKGAPPAPLTVHGSQVSEIVTRITWTAQDGGGIKPGEFDTFSVSAGPLPEKGDQVVFKTLQTYSDGEVVR
WVDVAAAGAAEPEHPAPTVTLTAAAAAGHDDDGDGDDTASIEYTAATESDSTSDGTARALGITGLVLGVLGLAAGAFALI
TTRRRA

Specific function: Unknown

COG id: COG4549

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass type I membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012533 [H]

Pfam domain/function: PF07987 DUF1775 [H]

EC number: NA

Molecular weight: Translated: 24986; Mature: 24855

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTIRTARLRRGVLCALAAAAGTIALAVPASAHVTVSPAEAAAGGYATLSFKVPTESDT
CCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEECCHHHCCCCEEEEEEECCCCCCC
ASTTGIDVQFPTDAPIASVTVQPKPGWTYKVTKGAPPAPLTVHGSQVSEIVTRITWTAQD
CCCCCEEEECCCCCCEEEEEEECCCCCEEEECCCCCCCCEEEECHHHHHHHHHEEEEECC
GGGIKPGEFDTFSVSAGPLPEKGDQVVFKTLQTYSDGEVVRWVDVAAAGAAEPEHPAPTV
CCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEE
TLTAAAAAGHDDDGDGDDTASIEYTAATESDSTSDGTARALGITGLVLGVLGLAAGAFAL
EEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHEEE
ITTRRRA
EEECCCC
>Mature Secondary Structure 
SRTIRTARLRRGVLCALAAAAGTIALAVPASAHVTVSPAEAAAGGYATLSFKVPTESDT
CCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEECCHHHCCCCEEEEEEECCCCCCC
ASTTGIDVQFPTDAPIASVTVQPKPGWTYKVTKGAPPAPLTVHGSQVSEIVTRITWTAQD
CCCCCEEEECCCCCCEEEEEEECCCCCEEEECCCCCCCCEEEECHHHHHHHHHEEEEECC
GGGIKPGEFDTFSVSAGPLPEKGDQVVFKTLQTYSDGEVVRWVDVAAAGAAEPEHPAPTV
CCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEE
TLTAAAAAGHDDDGDGDDTASIEYTAATESDSTSDGTARALGITGLVLGVLGLAAGAFAL
EEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHEEE
ITTRRRA
EEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]