Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318953

Identifier: 158318953

GI number: 158318953

Start: 8834748

End: 8835965

Strand: Direct

Name: 158318953

Synonym: Franean1_7236

Alternate gene names: NA

Gene position: 8834748-8835965 (Clockwise)

Preceding gene: 158318952

Following gene: 158318955

Centisome position: 98.36

GC content: 76.44

Gene sequence:

>1218_bases
GTGTCGGCCGCCCGCAGCCGCCGCTTCGTCGCGGTACGGCTTCTCATGTCCTTGCTCGCGGCATTGCTGGTCGTGGCCGG
GTGCGGGCTCGCGGGCGGTGCCGGGCCAAGTGCCCGGCCCGGCCCGACGAGCGACGAGGGGACCATCCCCACCCCGCCGC
CGACGATCGGTCCCGATGCCTTCGAGCAAAGTGGACGGGGTGGTCAGATCCGGCTGACGCTGCCGGACACGGGCACGCCG
GGGCCGTACCCGCTGGTCGTGGCGCTGCACAGCCTGTACCACGATGGCACCGAGCCACAGCGCGGCTGGGGGCTCGACGC
GCTCGCCCGGTCGGCCGGCTTCGCGGTCGTCTACCCCGACGGGCTGGGGATGTCCTGGAACGCGGGCACCTGCTGCGGCC
CGGCCGCGGCCGCCAGCAGTGACGACGTCGGCTGGCTGCGTTCACTCATCGCGCACCTGGAGAGCAGGTACCCGATCGAT
CCGCGCCGGGTCAGCATCATCGGGCTGTCGAACGGCGGCATGCTCGCCTACCGCTACGCCTGCGAGCACGGGGACGAGCT
CGCCGGGTTCGCGGTCGTCGCCGCCAGTCTGCAGACCTTCAACTGCACTCCGCCCGCGCCCGTAACCATGGTGTCGGTGC
ACGGCGGAATGGACGGCCACGTCCCGTACGCCGGCGCGCTGTGGTCCGAGGCCCTGCAGACGGGGATCACGCCCGTCGAG
GTGAGCCTCGCCCCGTTCCGGGCGGTGGACGGCTGCCCGTCACCCACCCAGCCCGCCGACACCACGACCACCGGCGCGGA
CGGCCGTCCGATCGGCGCGACCGGAGCCCAGGTCGGGGCGGTGGACCCGGCCGGGTCCGGCACCGCCGGGCCAGCCGACC
CGGCGATCATCGCCGCCGCCGGCCCCGGGCTGCTGCCCGCCACCACACCGCCGGCGGCCGGCCAGGCACCGCTCGGCCAG
GCACCGCTGGGGCAGCCGCCGGCGACGGGACCGGGCGCGCCCGCGGCCCAGCCGCCCGCGCCGCCCGTCCAGGCGCCGCC
GGTGGCCGTCCGGCACGAGACGACCTGTTCGACGTCCGCCCGCCTCGTGCAGTACGTGCTGCCGGCGCTGGGGCACGGCT
GGCCGCCGCTGACCGGCGCCGGCTCCTTCGACACGGCCGCCGTGCTGTGGGAGCTGCTGGGGCCGGCCCGCTCGGCCACC
GCCGGCCCCCGGATCTGA

Upstream 100 bases:

>100_bases
GCAAATGAGAACGACCTCGCACGTAGCAGCCCTAACACTAAGAGTAATCAACGACACCGTTGACGCGCGGGCCTGTGGGC
GGCGCGTCAGAATACCGGTC

Downstream 100 bases:

>100_bases
GCGATCCCGCCCTGCCGGCCCCAGACAGCCAAACCGGCCCCAGACAGCCAAACCGGCGTCAGGCGGCTGAGCTGGCCTCA
GGCGGCCGGCTGGAACGAGG

Product: putative hydrolase/esterase LpqP

Products: NA

Alternate protein names: Poly(3-Hydroxybutyrate) Depolymerase-Like Protein; Polyhydroxybutyrate Depolymerase; Lipoprotein; Esterase; Lipoprotein LpqP; Secreted Hydrolase; Esterase Lipoprotein LpqC; Secreted Esterase; Esterase Lipoprotein; Hydrolase; Poly(3-Hydroxybutyrate) Depolymerase; Esterase/Lipase/Thioesterase; Carbohydrate Esterase Family 1 Protein; Alpha/Beta Family Hydrolase; LOW QUALITY PROTEIN Esterase Lipoprotein LpqC; Secreted Protein

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MSAARSRRFVAVRLLMSLLAALLVVAGCGLAGGAGPSARPGPTSDEGTIPTPPPTIGPDAFEQSGRGGQIRLTLPDTGTP
GPYPLVVALHSLYHDGTEPQRGWGLDALARSAGFAVVYPDGLGMSWNAGTCCGPAAAASSDDVGWLRSLIAHLESRYPID
PRRVSIIGLSNGGMLAYRYACEHGDELAGFAVVAASLQTFNCTPPAPVTMVSVHGGMDGHVPYAGALWSEALQTGITPVE
VSLAPFRAVDGCPSPTQPADTTTTGADGRPIGATGAQVGAVDPAGSGTAGPADPAIIAAAGPGLLPATTPPAAGQAPLGQ
APLGQPPATGPGAPAAQPPAPPVQAPPVAVRHETTCSTSARLVQYVLPALGHGWPPLTGAGSFDTAAVLWELLGPARSAT
AGPRI

Sequences:

>Translated_405_residues
MSAARSRRFVAVRLLMSLLAALLVVAGCGLAGGAGPSARPGPTSDEGTIPTPPPTIGPDAFEQSGRGGQIRLTLPDTGTP
GPYPLVVALHSLYHDGTEPQRGWGLDALARSAGFAVVYPDGLGMSWNAGTCCGPAAAASSDDVGWLRSLIAHLESRYPID
PRRVSIIGLSNGGMLAYRYACEHGDELAGFAVVAASLQTFNCTPPAPVTMVSVHGGMDGHVPYAGALWSEALQTGITPVE
VSLAPFRAVDGCPSPTQPADTTTTGADGRPIGATGAQVGAVDPAGSGTAGPADPAIIAAAGPGLLPATTPPAAGQAPLGQ
APLGQPPATGPGAPAAQPPAPPVQAPPVAVRHETTCSTSARLVQYVLPALGHGWPPLTGAGSFDTAAVLWELLGPARSAT
AGPRI
>Mature_404_residues
SAARSRRFVAVRLLMSLLAALLVVAGCGLAGGAGPSARPGPTSDEGTIPTPPPTIGPDAFEQSGRGGQIRLTLPDTGTPG
PYPLVVALHSLYHDGTEPQRGWGLDALARSAGFAVVYPDGLGMSWNAGTCCGPAAAASSDDVGWLRSLIAHLESRYPIDP
RRVSIIGLSNGGMLAYRYACEHGDELAGFAVVAASLQTFNCTPPAPVTMVSVHGGMDGHVPYAGALWSEALQTGITPVEV
SLAPFRAVDGCPSPTQPADTTTTGADGRPIGATGAQVGAVDPAGSGTAGPADPAIIAAAGPGLLPATTPPAAGQAPLGQA
PLGQPPATGPGAPAAQPPAPPVQAPPVAVRHETTCSTSARLVQYVLPALGHGWPPLTGAGSFDTAAVLWELLGPARSATA
GPRI

Specific function: Unknown

COG id: COG3509

COG function: function code Q; Poly(3-hydroxybutyrate) depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40429; Mature: 40298

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAARSRRFVAVRLLMSLLAALLVVAGCGLAGGAGPSARPGPTSDEGTIPTPPPTIGPDA
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
FEQSGRGGQIRLTLPDTGTPGPYPLVVALHSLYHDGTEPQRGWGLDALARSAGFAVVYPD
HHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCEEEECCC
GLGMSWNAGTCCGPAAAASSDDVGWLRSLIAHLESRYPIDPRRVSIIGLSNGGMLAYRYA
CCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEE
CEHGDELAGFAVVAASLQTFNCTPPAPVTMVSVHGGMDGHVPYAGALWSEALQTGITPVE
HHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEE
VSLAPFRAVDGCPSPTQPADTTTTGADGRPIGATGAQVGAVDPAGSGTAGPADPAIIAAA
EECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
GPGLLPATTPPAAGQAPLGQAPLGQPPATGPGAPAAQPPAPPVQAPPVAVRHETTCSTSA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHH
RLVQYVLPALGHGWPPLTGAGSFDTAAVLWELLGPARSATAGPRI
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHCCCCCCCC
>Mature Secondary Structure 
SAARSRRFVAVRLLMSLLAALLVVAGCGLAGGAGPSARPGPTSDEGTIPTPPPTIGPDA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
FEQSGRGGQIRLTLPDTGTPGPYPLVVALHSLYHDGTEPQRGWGLDALARSAGFAVVYPD
HHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCEEEECCC
GLGMSWNAGTCCGPAAAASSDDVGWLRSLIAHLESRYPIDPRRVSIIGLSNGGMLAYRYA
CCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEE
CEHGDELAGFAVVAASLQTFNCTPPAPVTMVSVHGGMDGHVPYAGALWSEALQTGITPVE
HHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEE
VSLAPFRAVDGCPSPTQPADTTTTGADGRPIGATGAQVGAVDPAGSGTAGPADPAIIAAA
EECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
GPGLLPATTPPAAGQAPLGQAPLGQPPATGPGAPAAQPPAPPVQAPPVAVRHETTCSTSA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHH
RLVQYVLPALGHGWPPLTGAGSFDTAAVLWELLGPARSATAGPRI
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA