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The map label for this gene is nreC [H]

Identifier: 158318942

GI number: 158318942

Start: 8821867

End: 8822556

Strand: Direct

Name: nreC [H]

Synonym: Franean1_7225

Alternate gene names: 158318942

Gene position: 8821867-8822556 (Clockwise)

Preceding gene: 158318941

Following gene: 158318943

Centisome position: 98.22

GC content: 70.87

Gene sequence:

>690_bases
ATGCGGGTAGCGATAGCGGACGATTCAGCGCTGTTCCGGGAAGGCCTCGCGATGCTGCTCAACGCGGCAGGCGTGCAGGT
CATCGCGCAGGCCGCCGAACCGGACAAGATCCTCGCACACATCGCCGACGAACCTCCCGACGTCGTCATTCTCGACATGC
GCATGCCGCCGACCTTCACCAACGAGGGGCTCGTCACCGCCGAGCGGATCCGTGGCCTGCACCCCGGGGTCGGCGTCCTG
GTGCTCTCCACCTACGCCGACATCCGCTACGCGGTCCGCCTGCTGGGCGACGGACGCGGCGGCACCGGCTACCTCCTCAA
GGACCGCGTCGAGGATGTCGGTAACCTCCTCGACGGCCTGCGCCGGATCGCGGACGGCCGTCTCGTCGTGGACGAGGAGA
TCGTCGCCGGCCTGCTCACCCACCGCCGCAAGGCCAAGGCCCTCGACCGGCTCACCGAGCGGGAGCGCGCCGTCCTGCGG
GAGATGGCGGAGGGCCGCTCCAACGCCGGGATCGCGGTACGCCTGCACCTGGCCGCGAAGACGGTGGAGAACCACGTCGC
GAGCGTGTTCACCAAGCTCGAGATGCCGGTCTCCGGCGACGACAACCGCCGGGTGCTCGCCGTACTCGCCTGGTTGCGGT
CGTCAGGCGGCGTCGTCCCGCGCTCGCCGGAGGGCCCGCCACCGCCGTAG

Upstream 100 bases:

>100_bases
GCACTCGGCGGCGAGTTCACGCTGTCGAGCCCGGAGCGCTGCGGCACCCGGTTGACGGCGAGCATCCCGTGGAGCAGCGA
CGCGCGAGGTGGGTGGTGAC

Downstream 100 bases:

>100_bases
AGTCCGCCGCCGTAAGGTCCCAGCGTGTTCGGATTGATCCGGCCATGCCGGGGTCGTCTCGGCGCCGCGGCGCACGAGCT
CTGGTCGGCGCACCTCTGCG

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: Nitrogen regulation protein C [H]

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MRVAIADDSALFREGLAMLLNAAGVQVIAQAAEPDKILAHIADEPPDVVILDMRMPPTFTNEGLVTAERIRGLHPGVGVL
VLSTYADIRYAVRLLGDGRGGTGYLLKDRVEDVGNLLDGLRRIADGRLVVDEEIVAGLLTHRRKAKALDRLTERERAVLR
EMAEGRSNAGIAVRLHLAAKTVENHVASVFTKLEMPVSGDDNRRVLAVLAWLRSSGGVVPRSPEGPPPP

Sequences:

>Translated_229_residues
MRVAIADDSALFREGLAMLLNAAGVQVIAQAAEPDKILAHIADEPPDVVILDMRMPPTFTNEGLVTAERIRGLHPGVGVL
VLSTYADIRYAVRLLGDGRGGTGYLLKDRVEDVGNLLDGLRRIADGRLVVDEEIVAGLLTHRRKAKALDRLTERERAVLR
EMAEGRSNAGIAVRLHLAAKTVENHVASVFTKLEMPVSGDDNRRVLAVLAWLRSSGGVVPRSPEGPPPP
>Mature_229_residues
MRVAIADDSALFREGLAMLLNAAGVQVIAQAAEPDKILAHIADEPPDVVILDMRMPPTFTNEGLVTAERIRGLHPGVGVL
VLSTYADIRYAVRLLGDGRGGTGYLLKDRVEDVGNLLDGLRRIADGRLVVDEEIVAGLLTHRRKAKALDRLTERERAVLR
EMAEGRSNAGIAVRLHLAAKTVENHVASVFTKLEMPVSGDDNRRVLAVLAWLRSSGGVVPRSPEGPPPP

Specific function: Member of the two-component regulatory system nreB/nreC involved in the control of dissimilatory nitrate/nitrite reduction in response to oxygen. Phosphorylated nreC binds to a GC-rich palindromic sequence at the promoters of the nitrate (narGHJI) and nit

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786747, Length=194, Percent_Identity=24.7422680412371, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788521, Length=223, Percent_Identity=32.7354260089686, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 24723; Mature: 24723

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVAIADDSALFREGLAMLLNAAGVQVIAQAAEPDKILAHIADEPPDVVILDMRMPPTFT
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCCCC
NEGLVTAERIRGLHPGVGVLVLSTYADIRYAVRLLGDGRGGTGYLLKDRVEDVGNLLDGL
CCCCEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
RRIADGRLVVDEEIVAGLLTHRRKAKALDRLTERERAVLREMAEGRSNAGIAVRLHLAAK
HHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHH
TVENHVASVFTKLEMPVSGDDNRRVLAVLAWLRSSGGVVPRSPEGPPPP
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRVAIADDSALFREGLAMLLNAAGVQVIAQAAEPDKILAHIADEPPDVVILDMRMPPTFT
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCCCC
NEGLVTAERIRGLHPGVGVLVLSTYADIRYAVRLLGDGRGGTGYLLKDRVEDVGNLLDGL
CCCCEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
RRIADGRLVVDEEIVAGLLTHRRKAKALDRLTERERAVLREMAEGRSNAGIAVRLHLAAK
HHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHH
TVENHVASVFTKLEMPVSGDDNRRVLAVLAWLRSSGGVVPRSPEGPPPP
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA