| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318889
Identifier: 158318889
GI number: 158318889
Start: 8753255
End: 8755342
Strand: Direct
Name: 158318889
Synonym: Franean1_7172
Alternate gene names: NA
Gene position: 8753255-8755342 (Clockwise)
Preceding gene: 158318888
Following gene: 158318890
Centisome position: 97.45
GC content: 71.46
Gene sequence:
>2088_bases GTGAGTCAAGCGAGGCAGATTCCGACACGTCAACCGCTCTATGTCGTCTCCGACGGCTCCCGTCGTATGGATTCCGCCCG GCTGACGGCCGCCAATCTGCTGTTGGGCCACCTGGTCGACGGAGTCACGTCAACACCCGAGCTGGCGGCAGCCGTTCCGC TGTGCGTCCAGGAGTTCGACCAGGAATCGACGACGCTGATGCGGCTAGCCCCGTTGGATCCGGCCGTGCCGGTCCGCGAG CTGACGGCCAGCCTCGCGGAGCCATCCCTGACAGCGGCGTTCACCGGGCTGCGGGCGACAGCCACCGGTGACCTCGCCCA GCTGTTGGCCGACGACTTCGAGGTGGGTCAGCCCATCGTGGTCGTCATCACCAGCGGCCACTCCCGCGACACCGAGGCCG ACCGGCTGCGGGCCTTCACCGAACTGGTGACGACGAACCTGTGGCCGGACCAGACCGCCGACTGGGAACCGTCGGTGTAC CTGTTCGCCCTCGACGCTCCGGACTCGGCGATGCTCGATCGGTTCGCCAGCTCCGGTGCCCGTTGCCGGGTCCGCCCGGT GGCCGTCGGCACCGACCCCGCACCCGATGTCGCCGACGTGATCAGGGATCTGGAGCTGCGTGTCCAGGGCGGGGCGCAGG GGATGAAGGTGGCACGCTGGGTGCTGTCGGTCGCCCAGCTCGGCTCCACCGCGCCGACCGCTCGCGTCGACGGCGTGGAG ATTCACGAGATCCCTGAGCTGACTCTGCCATGGGTCACGAAGCCGCTGTGGTACCGCCGCTTCCTCGACATCACGGACGC GGACGCCCATCCGTTCGACCCGCTGGTGGACCTCGTCGCCCTGTCCGACGAACCGCCTCCCCCGGGCTCCCCGGGGCAGC TCGCCGACCAGGCCTGCTGGCCGGTGCGAGTCGTGGTCGCGGACGACTCGCCGACCGCCGTCGTCGGGCTGGTCGCTCCG AGGCCGCCGGAGCGGTTCGTCGACGACGACGGAGCACAGCGCCGGGACCGCACCGCCGCCCAGCTTCACCTGGATGCCGC GGCGCTGCCGCTGGACCCCGGAAAGGTACCGGCCGCCACCGACAGCCTCATCCGGGCCCAGCTGTGCGAGCGGCTGGCCG CCGCCGTCGCCACCGCCCACCACTACGGCGTGCGGCTCGGCCGGCAGACGCTCGAGAGCGCGGTCTACGCCCTCGACCCG GAGCCCGACGTGCTCCTCGTCGACTGCGACACCGCGAAGCTCGATCCGTCCGATCAGGCCAGTCCACAGGAGGACCTGAC CTGGCTGGCGCGGTTCGTCGAACGCTGCGTGGACGACCAGCAGCTGCCGCCGGTCGCCCTCGGCGAGGAGGCGCCGCCGG TGGTCCTGGACGCCACCGGCTGGAAGATGATCGCCGACGCGAAGTCCAAGGTGGGACTGGCCGTGCCGTCCGCCAGTCGC TGGCAGCGCTACCTGGCCGACCGGGTGCTGGAGCTGCGTGGGCCGCCCACCGTCACCGCCGTGCGGGTGAGCCCGGTCCT CGTCCCTCGCGGCGAGAAGGTCACGGTCCGCTGGCGAAGTCGGTACGCCGAGTCGATGATCGTGATCAGTCCGGACGGCA AGCAGATCCAGGTGCCGGCGAAGCAGCTCGCGGACGGCGCCGCGCGCATGACCGTGACCGCCGCCGGGCCGGTCCGGTTC CGGGCGGTCAACCAGGTCGGCACGACCGAGCTGGCCAGCGACTGGATTCACGTCTTCGACCTCCCGACGGGCGCGGATGT CGACTATCCGAAGATCTCGAACCTGCCGGCGATCTGGCTCGACGGCATGATCATGAACACCTGGGCCTTCGACGACACGA ATTTGGCCGCGATGCTGCCGGCGATACCCGGCGGTGCCGGTAACAGCGAGGGCAGGGGGCGCGCCGGCCACGTCGGCCCC GTAGGCCGGTCGGGTCGGGTCGGCCGGGCCGGCGGGCGTGGCGGCGACCCCGCGGCCTCGGTGCCGGGGCGCGCCGAGTT CCCGATCGACCCGACGACCTGGTTCGCCAACCCGCCGGAGATTCCCCGACGCGGCCGCGCGAGGAGATGGAAACTGCCAT GGACGTGA
Upstream 100 bases:
>100_bases TCCGCGAGGCTGCGGCGGCCACCCGTTCACGCCCCCGTAGCGCCTCACTTCCGCACCGGGAACAGGCCTGACCAGACCGT CGGACATCGGGGGAACAACG
Downstream 100 bases:
>100_bases GACCCAGGCTGGCCTCCGTGGCCGGCGCCCAGCCCCAGACACTGGCGAAGTCGCCGGGGGATCTGATCCGCTACGCGGCC CTGGGCGGTGTCATCATCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 695; Mature: 694
Protein sequence:
>695_residues MSQARQIPTRQPLYVVSDGSRRMDSARLTAANLLLGHLVDGVTSTPELAAAVPLCVQEFDQESTTLMRLAPLDPAVPVRE LTASLAEPSLTAAFTGLRATATGDLAQLLADDFEVGQPIVVVITSGHSRDTEADRLRAFTELVTTNLWPDQTADWEPSVY LFALDAPDSAMLDRFASSGARCRVRPVAVGTDPAPDVADVIRDLELRVQGGAQGMKVARWVLSVAQLGSTAPTARVDGVE IHEIPELTLPWVTKPLWYRRFLDITDADAHPFDPLVDLVALSDEPPPPGSPGQLADQACWPVRVVVADDSPTAVVGLVAP RPPERFVDDDGAQRRDRTAAQLHLDAAALPLDPGKVPAATDSLIRAQLCERLAAAVATAHHYGVRLGRQTLESAVYALDP EPDVLLVDCDTAKLDPSDQASPQEDLTWLARFVERCVDDQQLPPVALGEEAPPVVLDATGWKMIADAKSKVGLAVPSASR WQRYLADRVLELRGPPTVTAVRVSPVLVPRGEKVTVRWRSRYAESMIVISPDGKQIQVPAKQLADGAARMTVTAAGPVRF RAVNQVGTTELASDWIHVFDLPTGADVDYPKISNLPAIWLDGMIMNTWAFDDTNLAAMLPAIPGGAGNSEGRGRAGHVGP VGRSGRVGRAGGRGGDPAASVPGRAEFPIDPTTWFANPPEIPRRGRARRWKLPWT
Sequences:
>Translated_695_residues MSQARQIPTRQPLYVVSDGSRRMDSARLTAANLLLGHLVDGVTSTPELAAAVPLCVQEFDQESTTLMRLAPLDPAVPVRE LTASLAEPSLTAAFTGLRATATGDLAQLLADDFEVGQPIVVVITSGHSRDTEADRLRAFTELVTTNLWPDQTADWEPSVY LFALDAPDSAMLDRFASSGARCRVRPVAVGTDPAPDVADVIRDLELRVQGGAQGMKVARWVLSVAQLGSTAPTARVDGVE IHEIPELTLPWVTKPLWYRRFLDITDADAHPFDPLVDLVALSDEPPPPGSPGQLADQACWPVRVVVADDSPTAVVGLVAP RPPERFVDDDGAQRRDRTAAQLHLDAAALPLDPGKVPAATDSLIRAQLCERLAAAVATAHHYGVRLGRQTLESAVYALDP EPDVLLVDCDTAKLDPSDQASPQEDLTWLARFVERCVDDQQLPPVALGEEAPPVVLDATGWKMIADAKSKVGLAVPSASR WQRYLADRVLELRGPPTVTAVRVSPVLVPRGEKVTVRWRSRYAESMIVISPDGKQIQVPAKQLADGAARMTVTAAGPVRF RAVNQVGTTELASDWIHVFDLPTGADVDYPKISNLPAIWLDGMIMNTWAFDDTNLAAMLPAIPGGAGNSEGRGRAGHVGP VGRSGRVGRAGGRGGDPAASVPGRAEFPIDPTTWFANPPEIPRRGRARRWKLPWT >Mature_694_residues SQARQIPTRQPLYVVSDGSRRMDSARLTAANLLLGHLVDGVTSTPELAAAVPLCVQEFDQESTTLMRLAPLDPAVPVREL TASLAEPSLTAAFTGLRATATGDLAQLLADDFEVGQPIVVVITSGHSRDTEADRLRAFTELVTTNLWPDQTADWEPSVYL FALDAPDSAMLDRFASSGARCRVRPVAVGTDPAPDVADVIRDLELRVQGGAQGMKVARWVLSVAQLGSTAPTARVDGVEI HEIPELTLPWVTKPLWYRRFLDITDADAHPFDPLVDLVALSDEPPPPGSPGQLADQACWPVRVVVADDSPTAVVGLVAPR PPERFVDDDGAQRRDRTAAQLHLDAAALPLDPGKVPAATDSLIRAQLCERLAAAVATAHHYGVRLGRQTLESAVYALDPE PDVLLVDCDTAKLDPSDQASPQEDLTWLARFVERCVDDQQLPPVALGEEAPPVVLDATGWKMIADAKSKVGLAVPSASRW QRYLADRVLELRGPPTVTAVRVSPVLVPRGEKVTVRWRSRYAESMIVISPDGKQIQVPAKQLADGAARMTVTAAGPVRFR AVNQVGTTELASDWIHVFDLPTGADVDYPKISNLPAIWLDGMIMNTWAFDDTNLAAMLPAIPGGAGNSEGRGRAGHVGPV GRSGRVGRAGGRGGDPAASVPGRAEFPIDPTTWFANPPEIPRRGRARRWKLPWT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74701; Mature: 74570
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQARQIPTRQPLYVVSDGSRRMDSARLTAANLLLGHLVDGVTSTPELAAAVPLCVQEFD CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC QESTTLMRLAPLDPAVPVRELTASLAEPSLTAAFTGLRATATGDLAQLLADDFEVGQPIV CCCCEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHCCEECCCHHHHHHHHHHHCCCCCEE VVITSGHSRDTEADRLRAFTELVTTNLWPDQTADWEPSVYLFALDAPDSAMLDRFASSGA EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCC RCRVRPVAVGTDPAPDVADVIRDLELRVQGGAQGMKVARWVLSVAQLGSTAPTARVDGVE CEEEEEEEECCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEE IHEIPELTLPWVTKPLWYRRFLDITDADAHPFDPLVDLVALSDEPPPPGSPGQLADQACW EECCCCCCCCHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHCCCC PVRVVVADDSPTAVVGLVAPRPPERFVDDDGAQRRDRTAAQLHLDAAALPLDPGKVPAAT CEEEEEECCCCCEEEEEECCCCCHHHCCCCCCHHHHCCHHHEEECCEECCCCCCCCCCHH DSLIRAQLCERLAAAVATAHHYGVRLGRQTLESAVYALDPEPDVLLVDCDTAKLDPSDQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCC SPQEDLTWLARFVERCVDDQQLPPVALGEEAPPVVLDATGWKMIADAKSKVGLAVPSASR CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCEEECCCHHH WQRYLADRVLELRGPPTVTAVRVSPVLVPRGEKVTVRWRSRYAESMIVISPDGKQIQVPA HHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCEEEEEEHHHHHCEEEEECCCCCEEECCH KQLADGAARMTVTAAGPVRFRAVNQVGTTELASDWIHVFDLPTGADVDYPKISNLPAIWL HHHCCCCEEEEEEECCCEEEEEECCCCCHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEE DGMIMNTWAFDDTNLAAMLPAIPGGAGNSEGRGRAGHVGPVGRSGRVGRAGGRGGDPAAS CCEEEEEEECCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPGRAEFPIDPTTWFANPPEIPRRGRARRWKLPWT CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC >Mature Secondary Structure SQARQIPTRQPLYVVSDGSRRMDSARLTAANLLLGHLVDGVTSTPELAAAVPLCVQEFD CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC QESTTLMRLAPLDPAVPVRELTASLAEPSLTAAFTGLRATATGDLAQLLADDFEVGQPIV CCCCEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHCCEECCCHHHHHHHHHHHCCCCCEE VVITSGHSRDTEADRLRAFTELVTTNLWPDQTADWEPSVYLFALDAPDSAMLDRFASSGA EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCC RCRVRPVAVGTDPAPDVADVIRDLELRVQGGAQGMKVARWVLSVAQLGSTAPTARVDGVE CEEEEEEEECCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEE IHEIPELTLPWVTKPLWYRRFLDITDADAHPFDPLVDLVALSDEPPPPGSPGQLADQACW EECCCCCCCCHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHCCCC PVRVVVADDSPTAVVGLVAPRPPERFVDDDGAQRRDRTAAQLHLDAAALPLDPGKVPAAT CEEEEEECCCCCEEEEEECCCCCHHHCCCCCCHHHHCCHHHEEECCEECCCCCCCCCCHH DSLIRAQLCERLAAAVATAHHYGVRLGRQTLESAVYALDPEPDVLLVDCDTAKLDPSDQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCC SPQEDLTWLARFVERCVDDQQLPPVALGEEAPPVVLDATGWKMIADAKSKVGLAVPSASR CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCEEECCCHHH WQRYLADRVLELRGPPTVTAVRVSPVLVPRGEKVTVRWRSRYAESMIVISPDGKQIQVPA HHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCEEEEEEHHHHHCEEEEECCCCCEEECCH KQLADGAARMTVTAAGPVRFRAVNQVGTTELASDWIHVFDLPTGADVDYPKISNLPAIWL HHHCCCCEEEEEEECCCEEEEEECCCCCHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEE DGMIMNTWAFDDTNLAAMLPAIPGGAGNSEGRGRAGHVGPVGRSGRVGRAGGRGGDPAAS CCEEEEEEECCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPGRAEFPIDPTTWFANPPEIPRRGRARRWKLPWT CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA