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The map label for this gene is ucpA [C]

Identifier: 158318868

GI number: 158318868

Start: 8731559

End: 8732356

Strand: Reverse

Name: ucpA [C]

Synonym: Franean1_7149

Alternate gene names: 158318868

Gene position: 8732356-8731559 (Counterclockwise)

Preceding gene: 158318869

Following gene: 158318867

Centisome position: 97.22

GC content: 69.3

Gene sequence:

>798_bases
ATGACAGACAAATACGGACCGTGGGGCATCATTGCTGGCGGGTCCGACGGAGTCGGCGCCGCGTTCGCGCACGAGATGGC
AACCCGAGGCCTGAACGTCGTCCTGGTCGCCCGGCGGGTTCCCGTCCTGGAGGCGTTCGCCGAGGAGATACGGGCCAAAC
ACGGCGTCGAGGTCCGCACGGTCGCGCTGGACCTCAGCGTGCCGGGCGCCCTCGCATCGCTCGCGGACGCAACCTCCGAT
CTCGAAATCGGACTGTTCGTCTACAACGCCGGCGGCGACGACACCAGCGCGCTCTTCCTCGACAAGGACCTCGATACCCA
CCTGAAGCTGATCCACCGCAACTGCGACAGCGTCCTCGAAGCCGCCTACCGCTTCGGCGGCCCGATGGTTGCCCGGCGGC
GCGGTGGCCTGGTGCTGGTGACCTCCGGCGCGGCCTGGGCCGGCGGCGCGACGCTCGCCACCTACGGCGCCACCAAGGCC
TTCGATCTCCTCCTCGCCGAAGCGCTCTGGGCTGAATGGCACACCAGCGGCGTCGACGTCCTCGCTCTCGTGCTCGGCAG
GACCGACACCCCGTCCATGCGCCGCGTGTTCGACGCGAAAAACGAACCCTACGGAGACGCCGCGGACCCGGCCGACGTCG
CGAAGCAGGCACTCGACCACCTCGCCGACGGGCCCACCTGGATCTTCGGCAGCCCGAACCCCACCGGCGGTTCACCCTTC
GGCGCGACCAGCCGCCGCGACGCCGTCCTCATGATGAGCCAGGGATCATCCACGAGCAGCGCCAGCACAGGGTCCTAA

Upstream 100 bases:

>100_bases
AGGCGGCACACGACCTCCTAACCGCCGCGGGCGCCGCGGGCGCCGCGGGCGCCGCGGGCGCCGCCGACTGTTCACCCACC
ATCGAAAGGTGACGACAGCT

Downstream 100 bases:

>100_bases
CCACCACCCTGGGCCCGAGCCTGCCTATAGCGGCCAGGCGGTCACAGGAAGGCTGCTGTTCTCGTCCGCGAATGATCGGA
AACCGGTCCAGATGATCTTA

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: Short Chain Dehydrogenase; Oxidoreductase; Short-Chain Dehydrogenase; Short Chain Oxidoreductase; Dehydrogenase; SDR Family Dehydrogenase/Reductase; Short-Chain Dehydrogenase/Reductase Family Protein; Short-Chain Dehydrogenase/Reductase Sdr; Short-Chain Alcohol Dehydrogenase; Oxidoreductase Short Chain Dehydrogenase/Reductase Family

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MTDKYGPWGIIAGGSDGVGAAFAHEMATRGLNVVLVARRVPVLEAFAEEIRAKHGVEVRTVALDLSVPGALASLADATSD
LEIGLFVYNAGGDDTSALFLDKDLDTHLKLIHRNCDSVLEAAYRFGGPMVARRRGGLVLVTSGAAWAGGATLATYGATKA
FDLLLAEALWAEWHTSGVDVLALVLGRTDTPSMRRVFDAKNEPYGDAADPADVAKQALDHLADGPTWIFGSPNPTGGSPF
GATSRRDAVLMMSQGSSTSSASTGS

Sequences:

>Translated_265_residues
MTDKYGPWGIIAGGSDGVGAAFAHEMATRGLNVVLVARRVPVLEAFAEEIRAKHGVEVRTVALDLSVPGALASLADATSD
LEIGLFVYNAGGDDTSALFLDKDLDTHLKLIHRNCDSVLEAAYRFGGPMVARRRGGLVLVTSGAAWAGGATLATYGATKA
FDLLLAEALWAEWHTSGVDVLALVLGRTDTPSMRRVFDAKNEPYGDAADPADVAKQALDHLADGPTWIFGSPNPTGGSPF
GATSRRDAVLMMSQGSSTSSASTGS
>Mature_264_residues
TDKYGPWGIIAGGSDGVGAAFAHEMATRGLNVVLVARRVPVLEAFAEEIRAKHGVEVRTVALDLSVPGALASLADATSDL
EIGLFVYNAGGDDTSALFLDKDLDTHLKLIHRNCDSVLEAAYRFGGPMVARRRGGLVLVTSGAAWAGGATLATYGATKAF
DLLLAEALWAEWHTSGVDVLALVLGRTDTPSMRRVFDAKNEPYGDAADPADVAKQALDHLADGPTWIFGSPNPTGGSPFG
ATSRRDAVLMMSQGSSTSSASTGS

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7705855, Length=218, Percent_Identity=30.2752293577982, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI4557649, Length=180, Percent_Identity=32.7777777777778, Blast_Score=92, Evalue=3e-19,
Organism=Homo sapiens, GI226371731, Length=186, Percent_Identity=27.9569892473118, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI25152911, Length=181, Percent_Identity=32.5966850828729, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17532725, Length=178, Percent_Identity=32.0224719101124, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI212646214, Length=221, Percent_Identity=28.0542986425339, Blast_Score=72, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6319635, Length=210, Percent_Identity=27.6190476190476, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24640442, Length=214, Percent_Identity=30.8411214953271, Blast_Score=91, Evalue=6e-19,
Organism=Drosophila melanogaster, GI24584748, Length=165, Percent_Identity=30.9090909090909, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI161076933, Length=165, Percent_Identity=30.9090909090909, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28574402, Length=175, Percent_Identity=26.8571428571429, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24584744, Length=175, Percent_Identity=26.8571428571429, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24584752, Length=186, Percent_Identity=29.5698924731183, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27604; Mature: 27473

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKYGPWGIIAGGSDGVGAAFAHEMATRGLNVVLVARRVPVLEAFAEEIRAKHGVEVRT
CCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEHHCHHHHHHHHHHHHHCCCEEEE
VALDLSVPGALASLADATSDLEIGLFVYNAGGDDTSALFLDKDLDTHLKLIHRNCDSVLE
EEEECCCCHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
AAYRFGGPMVARRRGGLVLVTSGAAWAGGATLATYGATKAFDLLLAEALWAEWHTSGVDV
HHHHHCCCEEEECCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCHHH
LALVLGRTDTPSMRRVFDAKNEPYGDAADPADVAKQALDHLADGPTWIFGSPNPTGGSPF
HHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
GATSRRDAVLMMSQGSSTSSASTGS
CCCCCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
TDKYGPWGIIAGGSDGVGAAFAHEMATRGLNVVLVARRVPVLEAFAEEIRAKHGVEVRT
CCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEHHCHHHHHHHHHHHHHCCCEEEE
VALDLSVPGALASLADATSDLEIGLFVYNAGGDDTSALFLDKDLDTHLKLIHRNCDSVLE
EEEECCCCHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
AAYRFGGPMVARRRGGLVLVTSGAAWAGGATLATYGATKAFDLLLAEALWAEWHTSGVDV
HHHHHCCCEEEECCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCHHH
LALVLGRTDTPSMRRVFDAKNEPYGDAADPADVAKQALDHLADGPTWIFGSPNPTGGSPF
HHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
GATSRRDAVLMMSQGSSTSSASTGS
CCCCCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA