| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cutS [H]
Identifier: 158318853
GI number: 158318853
Start: 8714670
End: 8715791
Strand: Direct
Name: cutS [H]
Synonym: Franean1_7134
Alternate gene names: 158318853
Gene position: 8714670-8715791 (Clockwise)
Preceding gene: 158318852
Following gene: 158318858
Centisome position: 97.02
GC content: 63.99
Gene sequence:
>1122_bases GTGGATAGGGCGCCCGGTTTGAGCGTTCGCCTCAAACTCACCCTCAGCTACGCCGGCTTCCTCATGCTTGCGGGTGTCTT GCTGCTCGCGGTCGTGTGGGTGTTCCTGCTGCGTTACGTACCCGAGACGATCTACACAGCACCTCCCGAAACGGGATCGC GACCCGGCCCCTTTATGTTCATACCCGACCGCTCCGACCTGCTTCAAGCCTTCGTCCCGAAGGCAGCCGCAATGCTGGCG TTCCTGCTGATGTTCAGCCTGCTGGGAGGATGGATCCTCGCCGGCAGCATGCTCGCGCCCCTGACCCGCATCACCAACGC GACCCGCCTGACCGCGAACGGATCGCTCTCCCACCGGATCCAGCTGGAAGGCCGCAAGGATGAATTCCGCGAACTCGCCG ACGCCTTCGACGCCATGCTCGCGCGGCTCGAAGCACACGACGCCGAACAGCAGAGGTTCGCAGCCAATGCCTCCCACGAA CTGCGCACCCCGCTGGCGATCACGCAGACCCTGCTCGACGTGGCCCGCAAAGATCTGAACCGCGACGCCGGCGAACTTGT CGACCGCCTCCATTTGGTCAACACCCGAGCGATCGACCTCACCGAAGCACTGCTTCTGCTCAGCCGTGCCAACCAGCGAT CCTTCACGCGAGAACGCGTCGATCTGTCCCTGGCGGCGGAAGAAGCGACTGAAACGCTTCTCCCCCTCGCAGAAAAACAT GGCGTCACCATCGAGACCTCCGGCGACATGGCCGCCACCATCGGCTCACATGCGCTCCTGCTGCAGATGACCACGAACCT TGCGCACAACGCGATCGTCCACAATCTGCCTGAACAGGGCACCGTGTGGGTCACGACGAGCGTTCACTCGATGACGGTTG TGCTCACTGTCGAGAACACCGGCCAGAAGCTCGCCCCACAAGTGGCTTCCACGCTTGTCGAGCCGTTTCAACGCGGCACT GGACGCACTCGCACCGACCACGCAGGTGCCGGCCTCGGCCTGGCAATCGTCAAGAGCATCGCCCAGGCACACGACGGAAC CATCACCCTCACCCCCCGGGATGCTGGGGGGCTCTGCGTCACGGTGCGACTACCCGTCGCGCCACTGCGCGCTGGCAGAT AA
Upstream 100 bases:
>100_bases CTGCGCAAACGCCTCGGCGAACCCTGGATCATCGCCACCGTGCCCAGCGTTGGGTACCGCATCGACACAGCACCCGGCAC CGGGCGTGAGGGAGGGGACC
Downstream 100 bases:
>100_bases CGATCAGTCGAGGTCTGCCGTGGGTGCGTGGTCGGCCGTGGTCCTCATGAGGCGAACCCCCGTTGCTCGGCGACCGCGGT GAGCACGTGCCGGGCCAGGA
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MDRAPGLSVRLKLTLSYAGFLMLAGVLLLAVVWVFLLRYVPETIYTAPPETGSRPGPFMFIPDRSDLLQAFVPKAAAMLA FLLMFSLLGGWILAGSMLAPLTRITNATRLTANGSLSHRIQLEGRKDEFRELADAFDAMLARLEAHDAEQQRFAANASHE LRTPLAITQTLLDVARKDLNRDAGELVDRLHLVNTRAIDLTEALLLLSRANQRSFTRERVDLSLAAEEATETLLPLAEKH GVTIETSGDMAATIGSHALLLQMTTNLAHNAIVHNLPEQGTVWVTTSVHSMTVVLTVENTGQKLAPQVASTLVEPFQRGT GRTRTDHAGAGLGLAIVKSIAQAHDGTITLTPRDAGGLCVTVRLPVAPLRAGR
Sequences:
>Translated_373_residues MDRAPGLSVRLKLTLSYAGFLMLAGVLLLAVVWVFLLRYVPETIYTAPPETGSRPGPFMFIPDRSDLLQAFVPKAAAMLA FLLMFSLLGGWILAGSMLAPLTRITNATRLTANGSLSHRIQLEGRKDEFRELADAFDAMLARLEAHDAEQQRFAANASHE LRTPLAITQTLLDVARKDLNRDAGELVDRLHLVNTRAIDLTEALLLLSRANQRSFTRERVDLSLAAEEATETLLPLAEKH GVTIETSGDMAATIGSHALLLQMTTNLAHNAIVHNLPEQGTVWVTTSVHSMTVVLTVENTGQKLAPQVASTLVEPFQRGT GRTRTDHAGAGLGLAIVKSIAQAHDGTITLTPRDAGGLCVTVRLPVAPLRAGR >Mature_373_residues MDRAPGLSVRLKLTLSYAGFLMLAGVLLLAVVWVFLLRYVPETIYTAPPETGSRPGPFMFIPDRSDLLQAFVPKAAAMLA FLLMFSLLGGWILAGSMLAPLTRITNATRLTANGSLSHRIQLEGRKDEFRELADAFDAMLARLEAHDAEQQRFAANASHE LRTPLAITQTLLDVARKDLNRDAGELVDRLHLVNTRAIDLTEALLLLSRANQRSFTRERVDLSLAAEEATETLLPLAEKH GVTIETSGDMAATIGSHALLLQMTTNLAHNAIVHNLPEQGTVWVTTSVHSMTVVLTVENTGQKLAPQVASTLVEPFQRGT GRTRTDHAGAGLGLAIVKSIAQAHDGTITLTPRDAGGLCVTVRLPVAPLRAGR
Specific function: Member of the two-component regulatory system CutS/CutR, involved in the regulation of copper metabolism [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1786783, Length=309, Percent_Identity=29.126213592233, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1788393, Length=273, Percent_Identity=27.8388278388278, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1790346, Length=272, Percent_Identity=27.2058823529412, Blast_Score=85, Evalue=8e-18, Organism=Escherichia coli, GI87082128, Length=300, Percent_Identity=26, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1790861, Length=243, Percent_Identity=28.8065843621399, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI1789808, Length=309, Percent_Identity=26.8608414239482, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1787894, Length=332, Percent_Identity=25.3012048192771, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1789403, Length=283, Percent_Identity=27.5618374558304, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1786912, Length=233, Percent_Identity=29.6137339055794, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI1790551, Length=245, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1786600, Length=230, Percent_Identity=27.8260869565217, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 40336; Mature: 40336
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRAPGLSVRLKLTLSYAGFLMLAGVLLLAVVWVFLLRYVPETIYTAPPETGSRPGPFMF CCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCEEE IPDRSDLLQAFVPKAAAMLAFLLMFSLLGGWILAGSMLAPLTRITNATRLTANGSLSHRI ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEE QLEGRKDEFRELADAFDAMLARLEAHDAEQQRFAANASHELRTPLAITQTLLDVARKDLN EECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHCC RDAGELVDRLHLVNTRAIDLTEALLLLSRANQRSFTRERVDLSLAAEEATETLLPLAEKH CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GVTIETSGDMAATIGSHALLLQMTTNLAHNAIVHNLPEQGTVWVTTSVHSMTVVLTVENT CEEEEECCCCHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEEECCC GQKLAPQVASTLVEPFQRGTGRTRTDHAGAGLGLAIVKSIAQAHDGTITLTPRDAGGLCV CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEE TVRLPVAPLRAGR EEECCCCCCCCCC >Mature Secondary Structure MDRAPGLSVRLKLTLSYAGFLMLAGVLLLAVVWVFLLRYVPETIYTAPPETGSRPGPFMF CCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCEEE IPDRSDLLQAFVPKAAAMLAFLLMFSLLGGWILAGSMLAPLTRITNATRLTANGSLSHRI ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEE QLEGRKDEFRELADAFDAMLARLEAHDAEQQRFAANASHELRTPLAITQTLLDVARKDLN EECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHCC RDAGELVDRLHLVNTRAIDLTEALLLLSRANQRSFTRERVDLSLAAEEATETLLPLAEKH CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GVTIETSGDMAATIGSHALLLQMTTNLAHNAIVHNLPEQGTVWVTTSVHSMTVVLTVENT CEEEEECCCCHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEEECCC GQKLAPQVASTLVEPFQRGTGRTRTDHAGAGLGLAIVKSIAQAHDGTITLTPRDAGGLCV CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEE TVRLPVAPLRAGR EEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]