| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318848
Identifier: 158318848
GI number: 158318848
Start: 8707384
End: 8709717
Strand: Reverse
Name: 158318848
Synonym: Franean1_7129
Alternate gene names: NA
Gene position: 8709717-8707384 (Counterclockwise)
Preceding gene: 158318854
Following gene: 158318843
Centisome position: 96.97
GC content: 70.78
Gene sequence:
>2334_bases ATGGCGACCGTGGCGCGTGACCGGTTGGCGAGGATGTTGCGCGGCGACACGGAGACCGCGTTCAGCGTGGAGCTGACGGC GAGCACGGATGACCTGAGCCTCGAGGTCGAGGGCATCGGACCCGTCACGTTCCCGGTGCCGTACGCGCAGGCCCGCAAGC TCCTCGGCCTCGGTCAGCCTGCCCGGTTCGGTCGCGGTGAGGAGACGCTGATCGACCCGGGCGTCCGTGACACGTGGGAG ATCCCGAAGAACCTCGTTCATGCCACGTGGGACGACGACGCGTTGAACGTCATCCTGACAACGGCGAAAGATGAGCTGGG CCTGCCGATCGCCGCCGAGCTGACCGCCGATCTTCATTCCCTTCTGGTGTACGAGCCGGGCCAGTTCTTCCTCGCTCATC AGGACAGCGAGAAGGACGACTCGATGATCGGCACCCTGGTGGTGACGATGCCGTCCACCTACACCGGCGGCGAGCTGGTG GTCAGGCACAACGGCGAGCAGCGGGCCTGCCGGGGGTCGAAGACGGAGCTGTCGCTGGTCGCCTTCTACGCCGACTGCCG GCACGAGGTCGCCGAGGTGCGGTCGGGGTACCGGATCGCGCTCACCTACAACCTCCTGCTGCGTGGGGACACCTCCTTGC CGGAGGGCGACGAGGGAGCAGTCGCCGAACTGGCCGGTTTCCTTCGTGAGCATTTCGGCACACCGGTGCTCACCTACCGC CCCGGAGCCGCGTCCGGCCCGCCGAACCGGCTCGTCTACCTCCTCGACCATGAGTACACCCCGCGCGCGCTGGGCTGGGA TGGGCTGAAGGGCGCCGATGCCGCGTGCGTGTCCCTGCTGCGGGCCGCGGCCGAGCGGGAGGGGTACGAAACCGTCCTCG CGCTCGCCGACGTCAAGACGACGTACAGCGCGTACGAGGCGGACGACGACTACGGATACGGCGGAGGACGCTACGAGGAC GACGACGAAGACGAAGGCCCTGACGGCTCGGCCGACTACGAAGTCCAGGAACTGATCGACGTCGACATCACGCTCACACA CTGGACCGGTCCGGGCGGCGACCGGCTGGAGGCGACCTCGCTGTCCGTCGGCACCGACGAGGTCTGCGCGTCCACCGGGA CGGACGACCTTGAGCCCTATACCTCGGAGTACGAGGGCTACATGGGCAACTGGGGCAACACACTGGACCGCTGGTACCAC CGCGCGGCGGTTGTCGTATGGCCGCGCGAGCAGGCCTTCGCTAACCGTGCCGAGACCTCGCCCGCCTGGGCGCTCGACGC GCTCGCCGAGATGGCGCCGGCGAACGCGAAGGCCGCCGTGGCGACACTCGAGCCGTTCTGGGACGGCGTTCTGCGCGCAC GGTCGCCGCGGGACGAGGACAGGATCTCCGGGATTTTCGGCAAGGCGCTGCGAACGGCGGACGTCGTGGCGGACGCGGCG ACCGCGTCGATGCTGCTGCGCCCGTTCCGCGTCGAGAACCTGACTGTGGAGGACGCCGCGCCCTTCGCGAAGCTCGCCGG CCGGTACGGCCAGCAGTGGACCATGGAACTGCTGCGGACGTGGGCCGGCGCGGGACAGCCGACCTGGGCGATCGGCGGAC CGGAACGCAAGCGGTGGGTGGCGGGATCGCTTCCCGGTCTGTGCGCGGGGCTGCACGCCGCGCACGGCGCCGGCGCGGCG ACCGCACGGCTGCTTCTCGACCTGGCTTGGGAGTGGCTGCGTGAGGCCATCGGCATCGCCATCAGGTCGTCATCCCCCCG CCACCGCGACAGCGGCCTCGACGACCTGGGCGCACCGCTCGCCTCGGTGCTGACCGCCGCCGCGACCGGGGCGGCGAGTA CCCGGGACTCGGCGGCCGGGTACCTCCGGCGGCAGCCGGACACCGTCACCGCGCTTGTAATGCCCGCGCTACGCGCCGCG GCGGGCCTACCCGGCGACGGCCCCCGCGGCGAGGCGGGTTTCGGCGCCCTGGCCGCGGACTGCGCCGCGCGGCTGCGTGC CCGGCTGGCCCTCCCTCGGCGCGTGCCCACCGACTGGTCGATCGAGCTGCCCGCCGGCGGTTGCACCTGCGACCTGTGCG ACACCTTGCGCACGTTCCTGGCGGACCCGGACCGGCGCACCCTCGAATGGCCGCTCGCCGAGAAGCGCAGGCAGCATGTC CACTCCCGGATCGACATCGCCGAACTGCCCGTCAGTCACGTCACCCGGCGCCAGGGCCGCCCCTACACGCTCATCCTCCA CAAGACCGACGCGCTCTTCACCGAAGAGGCCAGGGCACGGGACCGGGACCAAGCCGATCTGGACTGGCTGGCTGCCGAAT GGCACCCGATGTGA
Upstream 100 bases:
>100_bases GGCCACCCAACGTGCGCCCCGGGTACCGAATCCCGTCGAGCGTGCGGGACCCTCTAGATTCGTGCTTGATAGCCGGGCCT CAGGGGCAAGGGGACAGGCA
Downstream 100 bases:
>100_bases TCATCTACTCCCGTGAGGCCGGGCTGGCCAAGCCGGCAGGCGTCCTCTTCCGCATTGATGTGTCGAGACGGTCGGGTTGG TGCTCGTGGTGCGGTACGAC
Product: 2OG-Fe(II) oxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 777; Mature: 776
Protein sequence:
>777_residues MATVARDRLARMLRGDTETAFSVELTASTDDLSLEVEGIGPVTFPVPYAQARKLLGLGQPARFGRGEETLIDPGVRDTWE IPKNLVHATWDDDALNVILTTAKDELGLPIAAELTADLHSLLVYEPGQFFLAHQDSEKDDSMIGTLVVTMPSTYTGGELV VRHNGEQRACRGSKTELSLVAFYADCRHEVAEVRSGYRIALTYNLLLRGDTSLPEGDEGAVAELAGFLREHFGTPVLTYR PGAASGPPNRLVYLLDHEYTPRALGWDGLKGADAACVSLLRAAAEREGYETVLALADVKTTYSAYEADDDYGYGGGRYED DDEDEGPDGSADYEVQELIDVDITLTHWTGPGGDRLEATSLSVGTDEVCASTGTDDLEPYTSEYEGYMGNWGNTLDRWYH RAAVVVWPREQAFANRAETSPAWALDALAEMAPANAKAAVATLEPFWDGVLRARSPRDEDRISGIFGKALRTADVVADAA TASMLLRPFRVENLTVEDAAPFAKLAGRYGQQWTMELLRTWAGAGQPTWAIGGPERKRWVAGSLPGLCAGLHAAHGAGAA TARLLLDLAWEWLREAIGIAIRSSSPRHRDSGLDDLGAPLASVLTAAATGAASTRDSAAGYLRRQPDTVTALVMPALRAA AGLPGDGPRGEAGFGALAADCAARLRARLALPRRVPTDWSIELPAGGCTCDLCDTLRTFLADPDRRTLEWPLAEKRRQHV HSRIDIAELPVSHVTRRQGRPYTLILHKTDALFTEEARARDRDQADLDWLAAEWHPM
Sequences:
>Translated_777_residues MATVARDRLARMLRGDTETAFSVELTASTDDLSLEVEGIGPVTFPVPYAQARKLLGLGQPARFGRGEETLIDPGVRDTWE IPKNLVHATWDDDALNVILTTAKDELGLPIAAELTADLHSLLVYEPGQFFLAHQDSEKDDSMIGTLVVTMPSTYTGGELV VRHNGEQRACRGSKTELSLVAFYADCRHEVAEVRSGYRIALTYNLLLRGDTSLPEGDEGAVAELAGFLREHFGTPVLTYR PGAASGPPNRLVYLLDHEYTPRALGWDGLKGADAACVSLLRAAAEREGYETVLALADVKTTYSAYEADDDYGYGGGRYED DDEDEGPDGSADYEVQELIDVDITLTHWTGPGGDRLEATSLSVGTDEVCASTGTDDLEPYTSEYEGYMGNWGNTLDRWYH RAAVVVWPREQAFANRAETSPAWALDALAEMAPANAKAAVATLEPFWDGVLRARSPRDEDRISGIFGKALRTADVVADAA TASMLLRPFRVENLTVEDAAPFAKLAGRYGQQWTMELLRTWAGAGQPTWAIGGPERKRWVAGSLPGLCAGLHAAHGAGAA TARLLLDLAWEWLREAIGIAIRSSSPRHRDSGLDDLGAPLASVLTAAATGAASTRDSAAGYLRRQPDTVTALVMPALRAA AGLPGDGPRGEAGFGALAADCAARLRARLALPRRVPTDWSIELPAGGCTCDLCDTLRTFLADPDRRTLEWPLAEKRRQHV HSRIDIAELPVSHVTRRQGRPYTLILHKTDALFTEEARARDRDQADLDWLAAEWHPM >Mature_776_residues ATVARDRLARMLRGDTETAFSVELTASTDDLSLEVEGIGPVTFPVPYAQARKLLGLGQPARFGRGEETLIDPGVRDTWEI PKNLVHATWDDDALNVILTTAKDELGLPIAAELTADLHSLLVYEPGQFFLAHQDSEKDDSMIGTLVVTMPSTYTGGELVV RHNGEQRACRGSKTELSLVAFYADCRHEVAEVRSGYRIALTYNLLLRGDTSLPEGDEGAVAELAGFLREHFGTPVLTYRP GAASGPPNRLVYLLDHEYTPRALGWDGLKGADAACVSLLRAAAEREGYETVLALADVKTTYSAYEADDDYGYGGGRYEDD DEDEGPDGSADYEVQELIDVDITLTHWTGPGGDRLEATSLSVGTDEVCASTGTDDLEPYTSEYEGYMGNWGNTLDRWYHR AAVVVWPREQAFANRAETSPAWALDALAEMAPANAKAAVATLEPFWDGVLRARSPRDEDRISGIFGKALRTADVVADAAT ASMLLRPFRVENLTVEDAAPFAKLAGRYGQQWTMELLRTWAGAGQPTWAIGGPERKRWVAGSLPGLCAGLHAAHGAGAAT ARLLLDLAWEWLREAIGIAIRSSSPRHRDSGLDDLGAPLASVLTAAATGAASTRDSAAGYLRRQPDTVTALVMPALRAAA GLPGDGPRGEAGFGALAADCAARLRARLALPRRVPTDWSIELPAGGCTCDLCDTLRTFLADPDRRTLEWPLAEKRRQHVH SRIDIAELPVSHVTRRQGRPYTLILHKTDALFTEEARARDRDQADLDWLAAEWHPM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84325; Mature: 84194
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVARDRLARMLRGDTETAFSVELTASTDDLSLEVEGIGPVTFPVPYAQARKLLGLGQP CCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCCEECCCCHHHHHHHHCCCCC ARFGRGEETLIDPGVRDTWEIPKNLVHATWDDDALNVILTTAKDELGLPIAAELTADLHS CCCCCCCCCEECCCCCCHHHCCHHHEECCCCCCCEEEEEEECCHHCCCCCHHHHHHHHHH LLVYEPGQFFLAHQDSEKDDSMIGTLVVTMPSTYTGGELVVRHNGEQRACRGSKTELSLV HEEECCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCHHHHCCCCCCEEEE AFYADCRHEVAEVRSGYRIALTYNLLLRGDTSLPEGDEGAVAELAGFLREHFGTPVLTYR HHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEC PGAASGPPNRLVYLLDHEYTPRALGWDGLKGADAACVSLLRAAAEREGYETVLALADVKT CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH TYSAYEADDDYGYGGGRYEDDDEDEGPDGSADYEVQELIDVDITLTHWTGPGGDRLEATS HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEEEEEEECCCCCCCEEEEE LSVGTDEVCASTGTDDLEPYTSEYEGYMGNWGNTLDRWYHRAAVVVWPREQAFANRAETS ECCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHCEEEEEECCHHHHHHHCCCC PAWALDALAEMAPANAKAAVATLEPFWDGVLRARSPRDEDRISGIFGKALRTADVVADAA CHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH TASMLLRPFRVENLTVEDAAPFAKLAGRYGQQWTMELLRTWAGAGQPTWAIGGPERKRWV HHHHHHCCHHCCCEEHHHCCCHHHHHHHCCHHHHHHHHHHHCCCCCCEEECCCCCCCCEE AGSLPGLCAGLHAAHGAGAATARLLLDLAWEWLREAIGIAIRSSSPRHRDSGLDDLGAPL CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCHHHHHHH ASVLTAAATGAASTRDSAAGYLRRQPDTVTALVMPALRAAAGLPGDGPRGEAGFGALAAD HHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH CAARLRARLALPRRVPTDWSIELPAGGCTCDLCDTLRTFLADPDRRTLEWPLAEKRRQHV HHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEECCHHHHHHHHH HSRIDIAELPVSHVTRRQGRPYTLILHKTDALFTEEARARDRDQADLDWLAAEWHPM HHHCCHHHCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCCCCHHHHHCCCCCC >Mature Secondary Structure ATVARDRLARMLRGDTETAFSVELTASTDDLSLEVEGIGPVTFPVPYAQARKLLGLGQP CCCHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCCEECCCCHHHHHHHHCCCCC ARFGRGEETLIDPGVRDTWEIPKNLVHATWDDDALNVILTTAKDELGLPIAAELTADLHS CCCCCCCCCEECCCCCCHHHCCHHHEECCCCCCCEEEEEEECCHHCCCCCHHHHHHHHHH LLVYEPGQFFLAHQDSEKDDSMIGTLVVTMPSTYTGGELVVRHNGEQRACRGSKTELSLV HEEECCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCHHHHCCCCCCEEEE AFYADCRHEVAEVRSGYRIALTYNLLLRGDTSLPEGDEGAVAELAGFLREHFGTPVLTYR HHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEC PGAASGPPNRLVYLLDHEYTPRALGWDGLKGADAACVSLLRAAAEREGYETVLALADVKT CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH TYSAYEADDDYGYGGGRYEDDDEDEGPDGSADYEVQELIDVDITLTHWTGPGGDRLEATS HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEEEEEEECCCCCCCEEEEE LSVGTDEVCASTGTDDLEPYTSEYEGYMGNWGNTLDRWYHRAAVVVWPREQAFANRAETS ECCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHCEEEEEECCHHHHHHHCCCC PAWALDALAEMAPANAKAAVATLEPFWDGVLRARSPRDEDRISGIFGKALRTADVVADAA CHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH TASMLLRPFRVENLTVEDAAPFAKLAGRYGQQWTMELLRTWAGAGQPTWAIGGPERKRWV HHHHHHCCHHCCCEEHHHCCCHHHHHHHCCHHHHHHHHHHHCCCCCCEEECCCCCCCCEE AGSLPGLCAGLHAAHGAGAATARLLLDLAWEWLREAIGIAIRSSSPRHRDSGLDDLGAPL CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCHHHHHHH ASVLTAAATGAASTRDSAAGYLRRQPDTVTALVMPALRAAAGLPGDGPRGEAGFGALAAD HHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH CAARLRARLALPRRVPTDWSIELPAGGCTCDLCDTLRTFLADPDRRTLEWPLAEKRRQHV HHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEECCHHHHHHHHH HSRIDIAELPVSHVTRRQGRPYTLILHKTDALFTEEARARDRDQADLDWLAAEWHPM HHHCCHHHCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA