| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318808
Identifier: 158318808
GI number: 158318808
Start: 8643259
End: 8643729
Strand: Direct
Name: 158318808
Synonym: Franean1_7080
Alternate gene names: NA
Gene position: 8643259-8643729 (Clockwise)
Preceding gene: 158318806
Following gene: 158318812
Centisome position: 96.23
GC content: 70.91
Gene sequence:
>471_bases ATGGCACTGTGCCTGTTCTTCGGGGAGAGCCACGAGGAGATGATGCGGATCCTGGTGGACGGCCGTCGGTCGATGAGCTC GTGGTCGAAGGGCTGTCACGTGCCGACGACCAGCGCGATCAGCCAGGCCCCGCTCGGCTGGGACCCGAGCGGGGCGGGTA CTCACCCGCCGGCTGCCGGGCACGCCTCCGGAGACAACGTGCGCGGTCGGGTCGCGGTTGCCGCGGCGCTGTCCCGCCTG CATGGGCAAGACGTGCCGCACCGCGGCATCAAACCGGCCAACATCCTGTCCGACGCCGCCGGGCTGCTCAAGATCATGGA CTTCGGGATCGCGCCCAGCAGCGCGATGGCCGGGGTGGGATCGGCGATGAGCCCGCGTAGCTGGCTGGCCCAGGGTAGCC GTGGCCGGGTGCCCTCGGACACCAGCCGGCGCACGTGTTCGTCGGGGTCTCGGGCCCACGTTTGCAGGTAG
Upstream 100 bases:
>100_bases GCGATGATCCCCCTGCCGGAAGTTCACCCATAACGATCAGCGGCGTCCGACGGCTCGCGCCCACGAGGCCAGGAATGGCG CGCGGACGGTGGCCTGGGAG
Downstream 100 bases:
>100_bases GCGAAGGTGAGTTCGGGGTGGTGTTCGATGAAGGGCCGGATCGGGCCCTCGCTGGACCACCGGGGGACAGCCGGGCCAGC ACCGGCAGGGCCACGCACGG
Product: serine/threonine protein kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MALCLFFGESHEEMMRILVDGRRSMSSWSKGCHVPTTSAISQAPLGWDPSGAGTHPPAAGHASGDNVRGRVAVAAALSRL HGQDVPHRGIKPANILSDAAGLLKIMDFGIAPSSAMAGVGSAMSPRSWLAQGSRGRVPSDTSRRTCSSGSRAHVCR
Sequences:
>Translated_156_residues MALCLFFGESHEEMMRILVDGRRSMSSWSKGCHVPTTSAISQAPLGWDPSGAGTHPPAAGHASGDNVRGRVAVAAALSRL HGQDVPHRGIKPANILSDAAGLLKIMDFGIAPSSAMAGVGSAMSPRSWLAQGSRGRVPSDTSRRTCSSGSRAHVCR >Mature_155_residues ALCLFFGESHEEMMRILVDGRRSMSSWSKGCHVPTTSAISQAPLGWDPSGAGTHPPAAGHASGDNVRGRVAVAAALSRLH GQDVPHRGIKPANILSDAAGLLKIMDFGIAPSSAMAGVGSAMSPRSWLAQGSRGRVPSDTSRRTCSSGSRAHVCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16230; Mature: 16098
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALCLFFGESHEEMMRILVDGRRSMSSWSKGCHVPTTSAISQAPLGWDPSGAGTHPPAAG CEEEEEECCCHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC HASGDNVRGRVAVAAALSRLHGQDVPHRGIKPANILSDAAGLLKIMDFGIAPSSAMAGVG CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCC SAMSPRSWLAQGSRGRVPSDTSRRTCSSGSRAHVCR CCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCC >Mature Secondary Structure ALCLFFGESHEEMMRILVDGRRSMSSWSKGCHVPTTSAISQAPLGWDPSGAGTHPPAAG EEEEEECCCHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC HASGDNVRGRVAVAAALSRLHGQDVPHRGIKPANILSDAAGLLKIMDFGIAPSSAMAGVG CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCC SAMSPRSWLAQGSRGRVPSDTSRRTCSSGSRAHVCR CCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA