| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318810
Identifier: 158318810
GI number: 158318810
Start: 8645498
End: 8646679
Strand: Reverse
Name: 158318810
Synonym: Franean1_7082
Alternate gene names: NA
Gene position: 8646679-8645498 (Counterclockwise)
Preceding gene: 158318811
Following gene: 158318809
Centisome position: 96.27
GC content: 68.7
Gene sequence:
>1182_bases ATGTCCACGTACCAGTACTACGAGTTCCTGGCCGTCGACCGGCCTCTGGACGCACGGCAGCAGGCTGAGGTCCGTGCGCT GTCCACTCGGGCCAGGATCACCGCCACCAGTTTCACCAATGAATACCACTGGGGTGACTTCCGTGGTGATCCTCGGAAGA TGGTGGAGCGGTTCTACGACGCCCATCTCTATCTTGCCAGCTGGGGCACCCACCGGGTGATGCTCCGTCTGCCCCGTGCC CTTCTCGATCTCAAGGTCGCCGAGCAGTACTGTGTCGATCCGCATGTGACCGCCTGGACCACCAGAGAGCATCTCGTCCT CGATCTGAGTAGCGAGGACGAGGGCGGGGACTGGGTGGAGGGCGCCGAGGACTCGTTGTCGGCGATCGTCGGTGTCCGTG CCGAACTCGCCGCCGGTGATCTGCGGCCCCTTTACCTGGCCTGGCTGGCGGTCTACGGGGTGTGGGAACGCGACGAGGAG GCCTTCGACGACGAGGCCGAGGACGATCTCGAGCCGCCGGTGCCCGCCGGGCTGGGTTCCCTGACCGCACCGCAGCGGGC CCTGGCGGACTTCCTCCGTCTCGACGCCGATCTGCTTGCCAGCGCGGCCCAGGCGAGTCCGCCTGCGGCCCAGGCCAGAG ACGATCCCCGTGCACTGGCCAGGTGGATCAAAGATCTTCCCGCCGGCGACAAGGAGAAGCTCCTGCTCCAGGTCACACAG GGCCACGGGGCCCGGGTCCAGATGGAAATGCTGCGACGCTTTCGTGGCGAGCCCGATCCCCGCCGGGATGGCCGTCCCCG CCGCACGGTCGCCCACCTGCTGGACGCCGCCGCGGACATCCGCCAGGAACACCGGCGGAACGCCGAGGCTGCTCGTGCCG AGCAGGACGCCCGCGATGCCCGGGAGCGTGCGCTGGCCCGGGAGAAACGGCTGGACGCTCTGGTCCGCGACGAGGACACG GCCTGGAGGCGCATCGACGCGCTGATCGACACCCGCAGGCAGAACGACTACGACGCGGCCATCGACCTCCTTGGGGATCT GCGGGCGCTGGCCTCACGTTCCGGCACCACGGCGGAGTTTGCCCGGCGGTTCACGCGCCTGCGTCAGGAGCATCTCCGGA AGCCCAGCCTGATCGCCCGTTTCGACCGCGCCGGCCTCGGTGCCGTCACGACCGGGAAGTGA
Upstream 100 bases:
>100_bases ATCTGTCACTGCCCGACCCTCCTCCGGGTGGGGCGGAATGGATCGAGGCCTACCGGCACTGGGCGCTCTGACGGCGAAGT GGCAAAAAATCAGGTAGAGG
Downstream 100 bases:
>100_bases CCCGCCTTCAGGTCTCCGCGGTGGATCTGCCGGCGGCCCGACGCTGATCCGAGTCGGGGTCGTCTGTCCGGTTCCCTATC CGCATGCCGGTCAACAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MSTYQYYEFLAVDRPLDARQQAEVRALSTRARITATSFTNEYHWGDFRGDPRKMVERFYDAHLYLASWGTHRVMLRLPRA LLDLKVAEQYCVDPHVTAWTTREHLVLDLSSEDEGGDWVEGAEDSLSAIVGVRAELAAGDLRPLYLAWLAVYGVWERDEE AFDDEAEDDLEPPVPAGLGSLTAPQRALADFLRLDADLLASAAQASPPAAQARDDPRALARWIKDLPAGDKEKLLLQVTQ GHGARVQMEMLRRFRGEPDPRRDGRPRRTVAHLLDAAADIRQEHRRNAEAARAEQDARDARERALAREKRLDALVRDEDT AWRRIDALIDTRRQNDYDAAIDLLGDLRALASRSGTTAEFARRFTRLRQEHLRKPSLIARFDRAGLGAVTTGK
Sequences:
>Translated_393_residues MSTYQYYEFLAVDRPLDARQQAEVRALSTRARITATSFTNEYHWGDFRGDPRKMVERFYDAHLYLASWGTHRVMLRLPRA LLDLKVAEQYCVDPHVTAWTTREHLVLDLSSEDEGGDWVEGAEDSLSAIVGVRAELAAGDLRPLYLAWLAVYGVWERDEE AFDDEAEDDLEPPVPAGLGSLTAPQRALADFLRLDADLLASAAQASPPAAQARDDPRALARWIKDLPAGDKEKLLLQVTQ GHGARVQMEMLRRFRGEPDPRRDGRPRRTVAHLLDAAADIRQEHRRNAEAARAEQDARDARERALAREKRLDALVRDEDT AWRRIDALIDTRRQNDYDAAIDLLGDLRALASRSGTTAEFARRFTRLRQEHLRKPSLIARFDRAGLGAVTTGK >Mature_392_residues STYQYYEFLAVDRPLDARQQAEVRALSTRARITATSFTNEYHWGDFRGDPRKMVERFYDAHLYLASWGTHRVMLRLPRAL LDLKVAEQYCVDPHVTAWTTREHLVLDLSSEDEGGDWVEGAEDSLSAIVGVRAELAAGDLRPLYLAWLAVYGVWERDEEA FDDEAEDDLEPPVPAGLGSLTAPQRALADFLRLDADLLASAAQASPPAAQARDDPRALARWIKDLPAGDKEKLLLQVTQG HGARVQMEMLRRFRGEPDPRRDGRPRRTVAHLLDAAADIRQEHRRNAEAARAEQDARDARERALAREKRLDALVRDEDTA WRRIDALIDTRRQNDYDAAIDLLGDLRALASRSGTTAEFARRFTRLRQEHLRKPSLIARFDRAGLGAVTTGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44468; Mature: 44337
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTYQYYEFLAVDRPLDARQQAEVRALSTRARITATSFTNEYHWGDFRGDPRKMVERFYD CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHH AHLYLASWGTHRVMLRLPRALLDLKVAEQYCVDPHVTAWTTREHLVLDLSSEDEGGDWVE HHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCCCCCCC GAEDSLSAIVGVRAELAAGDLRPLYLAWLAVYGVWERDEEAFDDEAEDDLEPPVPAGLGS CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCC LTAPQRALADFLRLDADLLASAAQASPPAAQARDDPRALARWIKDLPAGDKEKLLLQVTQ CCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEC GHGARVQMEMLRRFRGEPDPRRDGRPRRTVAHLLDAAADIRQEHRRNAEAARAEQDARDA CCCCEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH RERALAREKRLDALVRDEDTAWRRIDALIDTRRQNDYDAAIDLLGDLRALASRSGTTAEF HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHH ARRFTRLRQEHLRKPSLIARFDRAGLGAVTTGK HHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure STYQYYEFLAVDRPLDARQQAEVRALSTRARITATSFTNEYHWGDFRGDPRKMVERFYD CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHH AHLYLASWGTHRVMLRLPRALLDLKVAEQYCVDPHVTAWTTREHLVLDLSSEDEGGDWVE HHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCCCCCCC GAEDSLSAIVGVRAELAAGDLRPLYLAWLAVYGVWERDEEAFDDEAEDDLEPPVPAGLGS CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCC LTAPQRALADFLRLDADLLASAAQASPPAAQARDDPRALARWIKDLPAGDKEKLLLQVTQ CCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEC GHGARVQMEMLRRFRGEPDPRRDGRPRRTVAHLLDAAADIRQEHRRNAEAARAEQDARDA CCCCEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH RERALAREKRLDALVRDEDTAWRRIDALIDTRRQNDYDAAIDLLGDLRALASRSGTTAEF HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHH ARRFTRLRQEHLRKPSLIARFDRAGLGAVTTGK HHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA