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The map label for this gene is 158318809

Identifier: 158318809

GI number: 158318809

Start: 8644125

End: 8645129

Strand: Reverse

Name: 158318809

Synonym: Franean1_7081

Alternate gene names: NA

Gene position: 8645129-8644125 (Counterclockwise)

Preceding gene: 158318810

Following gene: 158318807

Centisome position: 96.25

GC content: 72.54

Gene sequence:

>1005_bases
TTGAAGTCTGCGAGGGAACGTATGGACGTGATTTCGGCCTACCGGGAGGTGGGCTCGTATCGAGGGGCCGCGGCGATGTG
CGGCACGACCCCGAAGACGGTCCGCCGGATCATCGAACGGCATGAGAACGGTGGTGGCCGTCCGGTTCGGGGGCGCCGGG
CCCGTAACTACGACTCGGTCGCGGAGCTGGTCGCCGGGCGGGTGAAGGCTACCAGCGGAAGGATCTCGGCGAAACGGCTG
CTGCCGGTGGCGCGGGCGGCGGGGTACGACGGGTCACCGCGGAACTTCCGCCGGCTGGTCGCGGAGGCGAGGGCGGACTG
GCGGGTGGGGCATCACCGGGGCCGCCGGCCGGCGGTCTGGGCACCGGGTGAGGCCCTGGCGATCGACTGGGGTGTGCTCG
GCGGGTTGCACGTTGTTCTGCGCGGTGCTGGCCTGGTCACGGGTCCGGTTCGTCCGGTTCGCCGTGGACGAGCGGGCGGG
CACGACGTTCGCGTTGCTGGGTACCGGCTGCTGTGCGAGGAGGTGCGGATCAGCTGCACCTACGGGATGTTGCTGTGCCT
GTCCTGGCCGGTCCGGGCGGCTTACCTTCTCGGCGACGTGCTCGGTGCCCCGGATACTGCCGGCGCCGCGATCTGTGAGA
TCACGCCGGCGGCGTTCCGGCAGCGGGTGTCGCGGGCGCGACGCACGATCCGCCAGGTGATCGACAACCGGTGCGGCCTG
GTCAACCCGGCCAACCCGTGCCGCTGCGGCCGGCAGATCGAGGGCGGGCTGGCCGCAGGCATCCTCGACCGGGACAACCT
GACCTTCGCCCGCCACCCCCGCGAACTAGCAGCCACGCCGGCCGTCGGGTGGCTGGAGCCGGCGGCGGCGCAGCTCGACC
TCGCCGTCGCGATCGGCGAGCTGTACCGCGCCGACCGCTTCGCCGCCCCCGGCGACATGTGGGCGCAGGTCCAACAAGCC
TGCCCCGACCTGCTCGCCGCACCGAACGGAGCGGCCGGTGGCTGA

Upstream 100 bases:

>100_bases
TCCCGGTTCCTCGTGGGATGTCGTGTCTGCCGGGAGCGTGAGGTCTGGGCGGTGACGGTGGCGGTGTCGAGCCAGTCACC
GCACCGCCCAGGAGCTCCTA

Downstream 100 bases:

>100_bases
CGTCAAGGACGAGTTCTCACCGGCCCTGGTCGCCGCGCTCGCGGCCGAACTCGCGCATGCCTGGCCGGCCTTCCCGGCCG
GCCGGTTCAGCGCCGACGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase; RNA Polymerase Sigma Factor ECF Subfamily; Integrase Catalytic Subunit; RNA Polymerase Sigma-24 Subunit ECF Subfamily; RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma Factor Sigma-70 Family; ECF Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKSARERMDVISAYREVGSYRGAAAMCGTTPKTVRRIIERHENGGGRPVRGRRARNYDSVAELVAGRVKATSGRISAKRL
LPVARAAGYDGSPRNFRRLVAEARADWRVGHHRGRRPAVWAPGEALAIDWGVLGGLHVVLRGAGLVTGPVRPVRRGRAGG
HDVRVAGYRLLCEEVRISCTYGMLLCLSWPVRAAYLLGDVLGAPDTAGAAICEITPAAFRQRVSRARRTIRQVIDNRCGL
VNPANPCRCGRQIEGGLAAGILDRDNLTFARHPRELAATPAVGWLEPAAAQLDLAVAIGELYRADRFAAPGDMWAQVQQA
CPDLLAAPNGAAGG

Sequences:

>Translated_334_residues
MKSARERMDVISAYREVGSYRGAAAMCGTTPKTVRRIIERHENGGGRPVRGRRARNYDSVAELVAGRVKATSGRISAKRL
LPVARAAGYDGSPRNFRRLVAEARADWRVGHHRGRRPAVWAPGEALAIDWGVLGGLHVVLRGAGLVTGPVRPVRRGRAGG
HDVRVAGYRLLCEEVRISCTYGMLLCLSWPVRAAYLLGDVLGAPDTAGAAICEITPAAFRQRVSRARRTIRQVIDNRCGL
VNPANPCRCGRQIEGGLAAGILDRDNLTFARHPRELAATPAVGWLEPAAAQLDLAVAIGELYRADRFAAPGDMWAQVQQA
CPDLLAAPNGAAGG
>Mature_334_residues
MKSARERMDVISAYREVGSYRGAAAMCGTTPKTVRRIIERHENGGGRPVRGRRARNYDSVAELVAGRVKATSGRISAKRL
LPVARAAGYDGSPRNFRRLVAEARADWRVGHHRGRRPAVWAPGEALAIDWGVLGGLHVVLRGAGLVTGPVRPVRRGRAGG
HDVRVAGYRLLCEEVRISCTYGMLLCLSWPVRAAYLLGDVLGAPDTAGAAICEITPAAFRQRVSRARRTIRQVIDNRCGL
VNPANPCRCGRQIEGGLAAGILDRDNLTFARHPRELAATPAVGWLEPAAAQLDLAVAIGELYRADRFAAPGDMWAQVQQA
CPDLLAAPNGAAGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35870; Mature: 35870

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSARERMDVISAYREVGSYRGAAAMCGTTPKTVRRIIERHENGGGRPVRGRRARNYDSV
CCHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
AELVAGRVKATSGRISAKRLLPVARAAGYDGSPRNFRRLVAEARADWRVGHHRGRRPAVW
HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEE
APGEALAIDWGVLGGLHVVLRGAGLVTGPVRPVRRGRAGGHDVRVAGYRLLCEEVRISCT
CCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHH
YGMLLCLSWPVRAAYLLGDVLGAPDTAGAAICEITPAAFRQRVSRARRTIRQVIDNRCGL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEECHHHHHHHHHHHHHHHHHHHHCCCCC
VNPANPCRCGRQIEGGLAAGILDRDNLTFARHPRELAATPAVGWLEPAAAQLDLAVAIGE
CCCCCHHHCCCHHCCCHHCCEECCCCCCHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHH
LYRADRFAAPGDMWAQVQQACPDLLAAPNGAAGG
HHHHHCCCCCHHHHHHHHHHCHHHHCCCCCCCCC
>Mature Secondary Structure
MKSARERMDVISAYREVGSYRGAAAMCGTTPKTVRRIIERHENGGGRPVRGRRARNYDSV
CCHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
AELVAGRVKATSGRISAKRLLPVARAAGYDGSPRNFRRLVAEARADWRVGHHRGRRPAVW
HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEE
APGEALAIDWGVLGGLHVVLRGAGLVTGPVRPVRRGRAGGHDVRVAGYRLLCEEVRISCT
CCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHH
YGMLLCLSWPVRAAYLLGDVLGAPDTAGAAICEITPAAFRQRVSRARRTIRQVIDNRCGL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEECHHHHHHHHHHHHHHHHHHHHCCCCC
VNPANPCRCGRQIEGGLAAGILDRDNLTFARHPRELAATPAVGWLEPAAAQLDLAVAIGE
CCCCCHHHCCCHHCCCHHCCEECCCCCCHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHH
LYRADRFAAPGDMWAQVQQACPDLLAAPNGAAGG
HHHHHCCCCCHHHHHHHHHHCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA