| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is dmfA2 [H]
Identifier: 158318788
GI number: 158318788
Start: 8614358
End: 8616631
Strand: Reverse
Name: dmfA2 [H]
Synonym: Franean1_7060
Alternate gene names: 158318788
Gene position: 8616631-8614358 (Counterclockwise)
Preceding gene: 158318789
Following gene: 158318785
Centisome position: 95.93
GC content: 67.72
Gene sequence:
>2274_bases GTGAGCGCGGAAGGCTGTTCTGTAACGTCGCCGGTCTGGGTTCTCGGATACTCTGACGAAATCATCGTGCGGCCCGGGCA GGACCTGACCTTCCGGGTCGGCGGGCAGGGGGTCGACACGTTTCACGCCCACCTTGTCCGGTTGCGCCACGGCGACACCA CTCCGGGTGGCCCGGGATTTCGCGAGACTGAGCTCGACTCCGAGGTCAACGGAGTTTATCCGCTATTGGACCAACCAGCG CATGTCGGGTCGTTCGGCCGGATTCCCGGCGCCCGCGACATCCTGCGCTCGCCGGACGGTTCACTGACCCTTTTCGCCTT CGTTCAGCCCACCGCCGACGGCGCCCGGCAGCCGGTGCTCTCCGGCTGGGACGACGCGACCTCGACGGGCGTCGCGCTGG TTCTGACCGATGGGTTGCGTCCCGCTCTCGTGTTCGGCGCGGGCCAGGATTCCGCCTGCCTCACCGCGCCCACCGGCCTG CAGGCCGGCACCTGGTACGCGCTGGCGGCAAGCTGGGACGGCGCGACCGGTCAGGCCAGCGTGACCGCGGTGCCGGTGGT GAACGCGTACAACAGCCGGTTCGGACGGGTGGTGGCCAACCCCATGGTGGAGATCACCGGCGCCCTTGCTGGCCCACCCG AGATCCCGGCCGTCGACCTGCTCCTCGGCGCTCTGGACACGACCGACGGCACTGTCGTGCGGGGGGCATACAACGGCAAG ATCGCGCTTCCAGCGGTCTACCGACGGCCTTTGACCGGCGACGAGGTGCGCCAGTTGGCCGGCAGCGGTAAAGCACCGGC GGTGATCGAAGGGCTCGGAGCCTGGTGGGACCTGTCCACCGGAATCGAGGGCACCGAGATCGCGCCCGGCGACCGCGGTG AAGGTGAACGTGTCGCCGGCAGTCTGGTGAACATGCCCACTCGCGCCGTGACCGCCCACAACTGGGACGGTTCCTCATAC AACTGGACGGCCCATCCCGAGTTGTACGGCGCGGTGCACTTTCACACCGACGACGTCGACGACACCGGCTGGGCGCCGAC CTGCACGCTGTCGGTGGGCGCCGACCTGCCATCGGGCGTATACGCACTGCGGCTACGGGCGGGCGGCTTCGAGGACCATG TGCCGTTCCTGGTCGGCGCCGCTCAGGGCGAGGAGAAATCGATCGCCCTGCTGCTGCCGACCGCGAGTTACCAGGCCTAC GCCAACGAGCATCTGGGCAGCGGTTCACCGATCGGGCAGGCGGTCGGCGGGCACACGCCCCTGGTGCAGCCGCTGGACGT GCTCAAGCTCGAACACGGCGAGTTCGGACGCTCGACCTACGACCTGCATGTCGACGGCAGCGGCGTCGCCTACACCTCGC GGCGCCGGCCGATCCTGAACATGCGCCCGCGGTACCGGTTCACGCATCTGGGCACCTGGCAGTTCCCCGCGGACCTTTAT CTCGTCGACTGGCTGACCGAGAAGGGATACGAGTTCGACGTCCTCTGTGACGAGGATGTCCACCGACGTGGCGTGGACGC GATGCGGCCCTATCGGGTGGTCATGACCGGCACCCATCCCGAATACACCTCAGAACGGATGCTCGATTCCTTCGAGGACT ACGTCGTCGATGGCGGGCGCGTGATGTACATGGGCGGCAACGGGTTCTACTGGGTCGTGTCCTTCCATCCGGAGAAGCCC TGGGTCATGGAGGTCCGCAAGGGTGAGGCTGGTTCGCGGGCCTGGCAGGCCGCGCCCGGGGAGACCCTCCACTCCACCAC CGGCGAGAAGGGCGGCCTGTGGCGAAACCGTGGCCGCGCTCCGCAGAAGGTCTTCGGCACCGGGTTCACAGCGGAGGGGT TCAACGGGTCCTCGTACTACCGGCGGATGCCGGACAGCGCCGAGGCAGCGGTGTCCTGGGTCTTCTCCGGTGTCGGCGAG GAGGAACTGATCGGTGACTTCGGCCTGGAGGGCGCCGGCGCCGCCGGCCAGGAACTGGACCGCGCCGACGTCCGGCTGGG CACCCCACCGGGCACCTACCTGCTCGCCTCCTCGGAGTACCACGACGACTCCTACCTGCTGGTGGTAGAAGAGATCGGTT TCATGTACCCGGGGCTCGGCGGCAGCGAGCACCGAGACGTCCGCGCGGACATGACCCTGTTCGAGACCGAATCAGGCGGC GCTGTCTTTTCGACCTCGTCGATTGCCTGGGCGGGAAGCCTCTCTCACAACGACTACGACAACAACGTCGCGCGCATCAC CGCCAACGTTCTCGATCGCTTCTCGACGTTGTGA
Upstream 100 bases:
>100_bases GTCTGCGCACCGAACGTGTCGCCGGTCCCCACCCGACCGTGGGCGCGGCGGTGCATGCGGTTTTCCTGAGCAGGGTTCGG CTGGTGTTCGGTGTGGCTGC
Downstream 100 bases:
>100_bases TCCAGACGACACTCCTGGCGTCGAAGCATGCAGCCGCCAACCGAGACGGCGGGGTGGGACGACGCCGCGATCCGCGCCGT GCACAGACCGATGACAGCGA
Product: large subunit of N,N-dimethylformamidase
Products: NA
Alternate protein names: N,N-dimethylformamidase heavy chain [H]
Number of amino acids: Translated: 757; Mature: 756
Protein sequence:
>757_residues MSAEGCSVTSPVWVLGYSDEIIVRPGQDLTFRVGGQGVDTFHAHLVRLRHGDTTPGGPGFRETELDSEVNGVYPLLDQPA HVGSFGRIPGARDILRSPDGSLTLFAFVQPTADGARQPVLSGWDDATSTGVALVLTDGLRPALVFGAGQDSACLTAPTGL QAGTWYALAASWDGATGQASVTAVPVVNAYNSRFGRVVANPMVEITGALAGPPEIPAVDLLLGALDTTDGTVVRGAYNGK IALPAVYRRPLTGDEVRQLAGSGKAPAVIEGLGAWWDLSTGIEGTEIAPGDRGEGERVAGSLVNMPTRAVTAHNWDGSSY NWTAHPELYGAVHFHTDDVDDTGWAPTCTLSVGADLPSGVYALRLRAGGFEDHVPFLVGAAQGEEKSIALLLPTASYQAY ANEHLGSGSPIGQAVGGHTPLVQPLDVLKLEHGEFGRSTYDLHVDGSGVAYTSRRRPILNMRPRYRFTHLGTWQFPADLY LVDWLTEKGYEFDVLCDEDVHRRGVDAMRPYRVVMTGTHPEYTSERMLDSFEDYVVDGGRVMYMGGNGFYWVVSFHPEKP WVMEVRKGEAGSRAWQAAPGETLHSTTGEKGGLWRNRGRAPQKVFGTGFTAEGFNGSSYYRRMPDSAEAAVSWVFSGVGE EELIGDFGLEGAGAAGQELDRADVRLGTPPGTYLLASSEYHDDSYLLVVEEIGFMYPGLGGSEHRDVRADMTLFETESGG AVFSTSSIAWAGSLSHNDYDNNVARITANVLDRFSTL
Sequences:
>Translated_757_residues MSAEGCSVTSPVWVLGYSDEIIVRPGQDLTFRVGGQGVDTFHAHLVRLRHGDTTPGGPGFRETELDSEVNGVYPLLDQPA HVGSFGRIPGARDILRSPDGSLTLFAFVQPTADGARQPVLSGWDDATSTGVALVLTDGLRPALVFGAGQDSACLTAPTGL QAGTWYALAASWDGATGQASVTAVPVVNAYNSRFGRVVANPMVEITGALAGPPEIPAVDLLLGALDTTDGTVVRGAYNGK IALPAVYRRPLTGDEVRQLAGSGKAPAVIEGLGAWWDLSTGIEGTEIAPGDRGEGERVAGSLVNMPTRAVTAHNWDGSSY NWTAHPELYGAVHFHTDDVDDTGWAPTCTLSVGADLPSGVYALRLRAGGFEDHVPFLVGAAQGEEKSIALLLPTASYQAY ANEHLGSGSPIGQAVGGHTPLVQPLDVLKLEHGEFGRSTYDLHVDGSGVAYTSRRRPILNMRPRYRFTHLGTWQFPADLY LVDWLTEKGYEFDVLCDEDVHRRGVDAMRPYRVVMTGTHPEYTSERMLDSFEDYVVDGGRVMYMGGNGFYWVVSFHPEKP WVMEVRKGEAGSRAWQAAPGETLHSTTGEKGGLWRNRGRAPQKVFGTGFTAEGFNGSSYYRRMPDSAEAAVSWVFSGVGE EELIGDFGLEGAGAAGQELDRADVRLGTPPGTYLLASSEYHDDSYLLVVEEIGFMYPGLGGSEHRDVRADMTLFETESGG AVFSTSSIAWAGSLSHNDYDNNVARITANVLDRFSTL >Mature_756_residues SAEGCSVTSPVWVLGYSDEIIVRPGQDLTFRVGGQGVDTFHAHLVRLRHGDTTPGGPGFRETELDSEVNGVYPLLDQPAH VGSFGRIPGARDILRSPDGSLTLFAFVQPTADGARQPVLSGWDDATSTGVALVLTDGLRPALVFGAGQDSACLTAPTGLQ AGTWYALAASWDGATGQASVTAVPVVNAYNSRFGRVVANPMVEITGALAGPPEIPAVDLLLGALDTTDGTVVRGAYNGKI ALPAVYRRPLTGDEVRQLAGSGKAPAVIEGLGAWWDLSTGIEGTEIAPGDRGEGERVAGSLVNMPTRAVTAHNWDGSSYN WTAHPELYGAVHFHTDDVDDTGWAPTCTLSVGADLPSGVYALRLRAGGFEDHVPFLVGAAQGEEKSIALLLPTASYQAYA NEHLGSGSPIGQAVGGHTPLVQPLDVLKLEHGEFGRSTYDLHVDGSGVAYTSRRRPILNMRPRYRFTHLGTWQFPADLYL VDWLTEKGYEFDVLCDEDVHRRGVDAMRPYRVVMTGTHPEYTSERMLDSFEDYVVDGGRVMYMGGNGFYWVVSFHPEKPW VMEVRKGEAGSRAWQAAPGETLHSTTGEKGGLWRNRGRAPQKVFGTGFTAEGFNGSSYYRRMPDSAEAAVSWVFSGVGEE ELIGDFGLEGAGAAGQELDRADVRLGTPPGTYLLASSEYHDDSYLLVVEEIGFMYPGLGGSEHRDVRADMTLFETESGGA VFSTSSIAWAGSLSHNDYDNNVARITANVLDRFSTL
Specific function: Hydrolyzes N,N-dimethylformamide, and to a lesser extent N,N-dimethylacetamide and N,N-diethylacetamide. Has no activity against the substituted amides N-methylformamide, N- ethylformamide, N-ethylformamide and N-methylacetamide or the unsubstituted amide
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 [H]
Pfam domain/function: NA
EC number: =3.5.1.56 [H]
Molecular weight: Translated: 81131; Mature: 81000
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEGCSVTSPVWVLGYSDEIIVRPGQDLTFRVGGQGVDTFHAHLVRLRHGDTTPGGPGF CCCCCCCCCCCEEEEECCCCEEEECCCCEEEEECCCCCHHHHEEEEEEECCCCCCCCCCC RETELDSEVNGVYPLLDQPAHVGSFGRIPGARDILRSPDGSLTLFAFVQPTADGARQPVL CCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCC SGWDDATSTGVALVLTDGLRPALVFGAGQDSACLTAPTGLQAGTWYALAASWDGATGQAS CCCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCE VTAVPVVNAYNSRFGRVVANPMVEITGALAGPPEIPAVDLLLGALDTTDGTVVRGAYNGK EEEEEEEECCCCCCCHHHHCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCE IALPAVYRRPLTGDEVRQLAGSGKAPAVIEGLGAWWDLSTGIEGTEIAPGDRGEGERVAG EEEHHHHCCCCCHHHHHHHHCCCCCCHHHHCCCCEEECCCCCCCCEECCCCCCCCHHHHH SLVNMPTRAVTAHNWDGSSYNWTAHPELYGAVHFHTDDVDDTGWAPTCTLSVGADLPSGV HHHCCCCCEEEEECCCCCCCEEEECCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCE YALRLRAGGFEDHVPFLVGAAQGEEKSIALLLPTASYQAYANEHLGSGSPIGQAVGGHTP EEEEEECCCCCCCCCEEEECCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCHHHCCCCCC LVQPLDVLKLEHGEFGRSTYDLHVDGSGVAYTSRRRPILNMRPRYRFTHLGTWQFPADLY CCCCCHHEEECCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCEE LVDWLTEKGYEFDVLCDEDVHRRGVDAMRPYRVVMTGTHPEYTSERMLDSFEDYVVDGGR EEEEHHCCCCEEEEEECCHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHEECCCE VMYMGGNGFYWVVSFHPEKPWVMEVRKGEAGSRAWQAAPGETLHSTTGEKGGLWRNRGRA EEEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC PQKVFGTGFTAEGFNGSSYYRRMPDSAEAAVSWVFSGVGEEELIGDFGLEGAGAAGQELD CHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCC RADVRLGTPPGTYLLASSEYHDDSYLLVVEEIGFMYPGLGGSEHRDVRADMTLFETESGG CCCEEECCCCCCEEEEECCCCCCCEEEEEECCCHHCCCCCCCCCCCEEECEEEEEECCCC AVFSTSSIAWAGSLSHNDYDNNVARITANVLDRFSTL EEEECCCEEEEECCCCCCCCCCCEEEEHHHHHHHHCC >Mature Secondary Structure SAEGCSVTSPVWVLGYSDEIIVRPGQDLTFRVGGQGVDTFHAHLVRLRHGDTTPGGPGF CCCCCCCCCCEEEEECCCCEEEECCCCEEEEECCCCCHHHHEEEEEEECCCCCCCCCCC RETELDSEVNGVYPLLDQPAHVGSFGRIPGARDILRSPDGSLTLFAFVQPTADGARQPVL CCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCC SGWDDATSTGVALVLTDGLRPALVFGAGQDSACLTAPTGLQAGTWYALAASWDGATGQAS CCCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCE VTAVPVVNAYNSRFGRVVANPMVEITGALAGPPEIPAVDLLLGALDTTDGTVVRGAYNGK EEEEEEEECCCCCCCHHHHCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCE IALPAVYRRPLTGDEVRQLAGSGKAPAVIEGLGAWWDLSTGIEGTEIAPGDRGEGERVAG EEEHHHHCCCCCHHHHHHHHCCCCCCHHHHCCCCEEECCCCCCCCEECCCCCCCCHHHHH SLVNMPTRAVTAHNWDGSSYNWTAHPELYGAVHFHTDDVDDTGWAPTCTLSVGADLPSGV HHHCCCCCEEEEECCCCCCCEEEECCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCE YALRLRAGGFEDHVPFLVGAAQGEEKSIALLLPTASYQAYANEHLGSGSPIGQAVGGHTP EEEEEECCCCCCCCCEEEECCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCHHHCCCCCC LVQPLDVLKLEHGEFGRSTYDLHVDGSGVAYTSRRRPILNMRPRYRFTHLGTWQFPADLY CCCCCHHEEECCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCEE LVDWLTEKGYEFDVLCDEDVHRRGVDAMRPYRVVMTGTHPEYTSERMLDSFEDYVVDGGR EEEEHHCCCCEEEEEECCHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHEECCCE VMYMGGNGFYWVVSFHPEKPWVMEVRKGEAGSRAWQAAPGETLHSTTGEKGGLWRNRGRA EEEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC PQKVFGTGFTAEGFNGSSYYRRMPDSAEAAVSWVFSGVGEEELIGDFGLEGAGAAGQELD CHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCC RADVRLGTPPGTYLLASSEYHDDSYLLVVEEIGFMYPGLGGSEHRDVRADMTLFETESGG CCCEEECCCCCCEEEEECCCCCCCEEEEEECCCHHCCCCCCCCCCCEEECEEEEEECCCC AVFSTSSIAWAGSLSHNDYDNNVARITANVLDRFSTL EEEECCCEEEEECCCCCCCCCCCEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA