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The map label for this gene is 158318785

Identifier: 158318785

GI number: 158318785

Start: 8610227

End: 8610535

Strand: Reverse

Name: 158318785

Synonym: Franean1_7056

Alternate gene names: NA

Gene position: 8610535-8610227 (Counterclockwise)

Preceding gene: 158318788

Following gene: 158318784

Centisome position: 95.86

GC content: 71.2

Gene sequence:

>309_bases
ATGTGTACCGAGCTTGGCGTGTCCCGTTCGGGCTACTACGCTTGGCGTGGTGGCGCGCCCAGCCGCCGGTCCCTCGACGA
CACCACCTACACCACTCTGATCAGAAAGATCTGCGCCGAGGGGCGCGGCAACCCCGGCGTGCGCCGCGTCCGCGCCGGCC
TGGCCGCGTCCGGTCACCAGCTGTCCCACAAGCGGGTCTGGCGTCTCATGCGGGCCGGCCGGCCTGCAAGGACGCCACCC
CAAGGCCTGGAAACGCACCACGATCGGCGGCGACCGGCCTGTACCGGCACCCGACCTGATCGGCCGTGA

Upstream 100 bases:

>100_bases
GAGGCGGACGACATTGTCACCGCGCTCACGGCCATGACAGCTCGCCAAGTTCGCTGCTATCGCGGACTGGGCTGCCTCCG
ACGAGTTCCCCGTCGCGTTC

Downstream 100 bases:

>100_bases
CTTCACGGCCCCGGCACCCGACACCCGCTGGTGCGGCGACGTCACCTACGTCAGGACCTGGGACGGATGGGCCTACGTCG
CGACCGTGATCGACCTGTAC

Product: integrase catalytic subunit

Products: NA

Alternate protein names: Integrase Catalytic Region

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MCTELGVSRSGYYAWRGGAPSRRSLDDTTYTTLIRKICAEGRGNPGVRRVRAGLAASGHQLSHKRVWRLMRAGRPARTPP
QGLETHHDRRRPACTGTRPDRP

Sequences:

>Translated_102_residues
MCTELGVSRSGYYAWRGGAPSRRSLDDTTYTTLIRKICAEGRGNPGVRRVRAGLAASGHQLSHKRVWRLMRAGRPARTPP
QGLETHHDRRRPACTGTRPDRP
>Mature_102_residues
MCTELGVSRSGYYAWRGGAPSRRSLDDTTYTTLIRKICAEGRGNPGVRRVRAGLAASGHQLSHKRVWRLMRAGRPARTPP
QGLETHHDRRRPACTGTRPDRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11391; Mature: 11391

Theoretical pI: Translated: 12.07; Mature: 12.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCTELGVSRSGYYAWRGGAPSRRSLDDTTYTTLIRKICAEGRGNPGVRRVRAGLAASGHQ
CCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC
LSHKRVWRLMRAGRPARTPPQGLETHHDRRRPACTGTRPDRP
HHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MCTELGVSRSGYYAWRGGAPSRRSLDDTTYTTLIRKICAEGRGNPGVRRVRAGLAASGHQ
CCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC
LSHKRVWRLMRAGRPARTPPQGLETHHDRRRPACTGTRPDRP
HHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA