| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318783
Identifier: 158318783
GI number: 158318783
Start: 8608574
End: 8609617
Strand: Direct
Name: 158318783
Synonym: Franean1_7054
Alternate gene names: NA
Gene position: 8608574-8609617 (Clockwise)
Preceding gene: 158318782
Following gene: 158318786
Centisome position: 95.84
GC content: 69.35
Gene sequence:
>1044_bases ATGCTGCGACTCCCGGACGTCTGGACATGGGACTTCTGGTTCGCCGACGACGGCGTGCACTACCATATGTTCTTCCTCAA GGCATCCCGCGCTCTCGGCGATCCCGACCAGCGCCACTGGAAGGCCGTCGTCGGGCATGCCGTCTCGTCCGACCTCACCA GGTGGGACGAGGTCGCGGACGCGGTCGCGCCCAGCGACCCGGTGGCCTTCGACGACATCGCCACCTGGACCGGATCGGTC GTCCGGGACGACGACGGAACCTGGATGATGTTCTACACCGGTGCCAGTTCCGGCGAGCGGGGGCTCAAACAGCGGATCGG CCTCGCCACCTCCACAGACCTCCACACCTGGGAGAAACATCCGGCAGCGCCGGTGCTGGAGAGTGATCCGCACTGGTACG AGCAGCTGGTCGACGCACAGTGGCCCGACGAGGCATGGCGCGACCCGTGGGTGTTGCGTGACCCGGCCGGCGATGGCTGG CACATGCTGGTCACCGCGCGCGCCGCGACCGGGCCCGGTGACCAACGGGGCGTGATCGGACACGCCCGTTCCCACGACCT GGTGCACTGGTCGGCCCAGCCACCCCTGAGCCTGCCGCAGACGGGTTTCGGACATCTCGAGGTCCCCCAGGTCGAGGTCG TCGACGGTCGTCCCGTGTTGGTGTTCTCGTGCCTGCGGGGTGAGCTCTCCCGGGAACGCCGTGAGCGCGGCGTACACGGC GGAACGTGGTGCGTTCCCGTCGAGACGCTTCTGGGTCCCTACGATGTCACGCGCGCGGTGCAGGTGACCGACGAGTCCCT CTACAGCGGACGCCTGGTCCGGGACCGGTCCGGGCGCTGGGTGATGCTCGCCTTCCACAACGTGGTGGACGGCGGTCGGT TCGTCGGGGAGATCAGTGATCCGATGTACGTCTCGTGGGCGCAGGACGGCACCAGGCTGGTGCTCAGCGGGACGGCGCGA GACGACCCGGGGCGCGCCTCGGACGACGCCACCGCCAGCCACGACGACCCGGGGCTCAACCCGGTCTCTCGGCCGGGGGT GTGA
Upstream 100 bases:
>100_bases GCCCGCTCGTTCGACGCGCTTCCGTCAGCCCGCCACCCCACCGGGTCTCCCGGGTCTCCGGCTGACCGGGCCCACAACCA CCGCACAGGAAGGGCACGTG
Downstream 100 bases:
>100_bases AGAGTAGCCCCGGAAGAACAGCAGGGGGACGCACCGAGCTTGCCGAGCACCCCGAGCGCGGCGTGGAGTGTTTCCGCTTT TTTGGACGCCCTCTTAGGCT
Product: glycosyl hydrolase family 32 protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Glycosyl Hydrolases Family
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MLRLPDVWTWDFWFADDGVHYHMFFLKASRALGDPDQRHWKAVVGHAVSSDLTRWDEVADAVAPSDPVAFDDIATWTGSV VRDDDGTWMMFYTGASSGERGLKQRIGLATSTDLHTWEKHPAAPVLESDPHWYEQLVDAQWPDEAWRDPWVLRDPAGDGW HMLVTARAATGPGDQRGVIGHARSHDLVHWSAQPPLSLPQTGFGHLEVPQVEVVDGRPVLVFSCLRGELSRERRERGVHG GTWCVPVETLLGPYDVTRAVQVTDESLYSGRLVRDRSGRWVMLAFHNVVDGGRFVGEISDPMYVSWAQDGTRLVLSGTAR DDPGRASDDATASHDDPGLNPVSRPGV
Sequences:
>Translated_347_residues MLRLPDVWTWDFWFADDGVHYHMFFLKASRALGDPDQRHWKAVVGHAVSSDLTRWDEVADAVAPSDPVAFDDIATWTGSV VRDDDGTWMMFYTGASSGERGLKQRIGLATSTDLHTWEKHPAAPVLESDPHWYEQLVDAQWPDEAWRDPWVLRDPAGDGW HMLVTARAATGPGDQRGVIGHARSHDLVHWSAQPPLSLPQTGFGHLEVPQVEVVDGRPVLVFSCLRGELSRERRERGVHG GTWCVPVETLLGPYDVTRAVQVTDESLYSGRLVRDRSGRWVMLAFHNVVDGGRFVGEISDPMYVSWAQDGTRLVLSGTAR DDPGRASDDATASHDDPGLNPVSRPGV >Mature_347_residues MLRLPDVWTWDFWFADDGVHYHMFFLKASRALGDPDQRHWKAVVGHAVSSDLTRWDEVADAVAPSDPVAFDDIATWTGSV VRDDDGTWMMFYTGASSGERGLKQRIGLATSTDLHTWEKHPAAPVLESDPHWYEQLVDAQWPDEAWRDPWVLRDPAGDGW HMLVTARAATGPGDQRGVIGHARSHDLVHWSAQPPLSLPQTGFGHLEVPQVEVVDGRPVLVFSCLRGELSRERRERGVHG GTWCVPVETLLGPYDVTRAVQVTDESLYSGRLVRDRSGRWVMLAFHNVVDGGRFVGEISDPMYVSWAQDGTRLVLSGTAR DDPGRASDDATASHDDPGLNPVSRPGV
Specific function: Unknown
COG id: COG1621
COG function: function code G; Beta-fructosidases (levanase/invertase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38555; Mature: 38555
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLPDVWTWDFWFADDGVHYHMFFLKASRALGDPDQRHWKAVVGHAVSSDLTRWDEVAD CCCCCCCEEEEEEEECCCCEEEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AVAPSDPVAFDDIATWTGSVVRDDDGTWMMFYTGASSGERGLKQRIGLATSTDLHTWEKH HCCCCCCCCHHHHHHCCCCEEECCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCC PAAPVLESDPHWYEQLVDAQWPDEAWRDPWVLRDPAGDGWHMLVTARAATGPGDQRGVIG CCCCCCCCCCHHHHHHHCCCCCHHHHCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCEE HARSHDLVHWSAQPPLSLPQTGFGHLEVPQVEVVDGRPVLVFSCLRGELSRERRERGVHG CCCCCCEEEECCCCCCCCCCCCCCCEECCEEEEECCCCEEEHHHHHHHHHHHHHHCCCCC GTWCVPVETLLGPYDVTRAVQVTDESLYSGRLVRDRSGRWVMLAFHNVVDGGRFVGEISD CEEEEEHHHHCCCHHHCEEEEECCHHHHCCEEEEECCCCEEEEEEECCCCCCEEEEECCC PMYVSWAQDGTRLVLSGTARDDPGRASDDATASHDDPGLNPVSRPGV CEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLRLPDVWTWDFWFADDGVHYHMFFLKASRALGDPDQRHWKAVVGHAVSSDLTRWDEVAD CCCCCCCEEEEEEEECCCCEEEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AVAPSDPVAFDDIATWTGSVVRDDDGTWMMFYTGASSGERGLKQRIGLATSTDLHTWEKH HCCCCCCCCHHHHHHCCCCEEECCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCC PAAPVLESDPHWYEQLVDAQWPDEAWRDPWVLRDPAGDGWHMLVTARAATGPGDQRGVIG CCCCCCCCCCHHHHHHHCCCCCHHHHCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCEE HARSHDLVHWSAQPPLSLPQTGFGHLEVPQVEVVDGRPVLVFSCLRGELSRERRERGVHG CCCCCCEEEECCCCCCCCCCCCCCCEECCEEEEECCCCEEEHHHHHHHHHHHHHHCCCCC GTWCVPVETLLGPYDVTRAVQVTDESLYSGRLVRDRSGRWVMLAFHNVVDGGRFVGEISD CEEEEEHHHHCCCHHHCEEEEECCHHHHCCEEEEECCCCEEEEEEECCCCCCEEEEECCC PMYVSWAQDGTRLVLSGTARDDPGRASDDATASHDDPGLNPVSRPGV CEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA