| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is efeU [H]
Identifier: 158318738
GI number: 158318738
Start: 8547188
End: 8548063
Strand: Reverse
Name: efeU [H]
Synonym: Franean1_7009
Alternate gene names: 158318738
Gene position: 8548063-8547188 (Counterclockwise)
Preceding gene: 158318741
Following gene: 158318737
Centisome position: 95.17
GC content: 68.38
Gene sequence:
>876_bases GTGTTCGCCAACTACCTGATCGGCCTGCGTGAAGGCCTCGAGGCCGCGCTGGTCGTGAGCATCCTGATCGCCTACCTGGT CAAGGTTGGCCGACGGGACCGGCTGGTGGTCGTCGCCGGTGGGGTGGCCCTGGCGGTCGCTGTCAGCGTCGCGTTCGGGG CGCTGCTGACGTACACGTCGACGAGCCTGCTCGCGGACTTCAGGAGCCAGGAGATCTTCGGCGGCACGATGTCCGCGATC GCGGTGGTGTTCGTCACCGGGATGGTCTTCTGGATGCGTCGCACCGCCCGCAGTATGCGCGCGGAGCTGGACGGACGGCT CTCCTCAGCACTGGAGCTGGGCACCTTCGCCGTCGTCCTCACGGCCTTCCTCTCGGTGGCCCGCGAGGGCCTGGAGACCG CCTTGTTCTTCTGGTCGGCGGTGCAGGCCGCGGGAAGCACGATGGAGCCGGTGATCGGTTTCTCGCTGGGCATTGCGACC GCGGTGGTGCTCGCCTGGCTGCTGTACCGGCGGTCGGTCCGGCTGAACCTCGCCCGGTTCTTCACCTGGACGGGCGCCGG CCTGATCGTGATCGCGGCCGGGGTGCTGGCCTACGCGATCCACGACCTGCAGGAAGGCGGCGTCATCGGCGGGCTGAACA CCCTCGCCTTCGACGTCAGCGAGCAGATCTCACCAGGGTCGTGGTACGGGTCCCTACTCAAGGGCGTCTTCAACTTCACC CCGCAGACGACCGTCGCCCAGGCGATCGCCTGGGTCGCCTACATCGTCCCGGTCATGGCCTTGTTTTTCCTCGGTCATCG GATCCGGTCCGGCCAGCCGAGCGAGCCGAGCGAGCCGAGCGAGCCGCCGCCCGTCCCGTCGGGATCGACCAGTTGA
Upstream 100 bases:
>100_bases TGTCGGGCGGAAAGTTGGCTTGCGTTTTCGGTAACTATTAGGTATGCCTAACCTTCAACAACTATCGCCAGATAGTTGTT GATCTGGAGGATCAAGTGTC
Downstream 100 bases:
>100_bases CGGCCACCGCGGCGGCGGGTGCCGTCATCCACGCCTGATCCATCTGTCGCATCGCCAGAAACCTTCGAGGAGAACCGGTG AAATCGCCTGTCGGCCGCGT
Product: iron permease FTR1
Products: NA
Alternate protein names: Fe(2+) ion permease efeU; Ferrous iron uptake protein [H]
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MFANYLIGLREGLEAALVVSILIAYLVKVGRRDRLVVVAGGVALAVAVSVAFGALLTYTSTSLLADFRSQEIFGGTMSAI AVVFVTGMVFWMRRTARSMRAELDGRLSSALELGTFAVVLTAFLSVAREGLETALFFWSAVQAAGSTMEPVIGFSLGIAT AVVLAWLLYRRSVRLNLARFFTWTGAGLIVIAAGVLAYAIHDLQEGGVIGGLNTLAFDVSEQISPGSWYGSLLKGVFNFT PQTTVAQAIAWVAYIVPVMALFFLGHRIRSGQPSEPSEPSEPPPVPSGSTS
Sequences:
>Translated_291_residues MFANYLIGLREGLEAALVVSILIAYLVKVGRRDRLVVVAGGVALAVAVSVAFGALLTYTSTSLLADFRSQEIFGGTMSAI AVVFVTGMVFWMRRTARSMRAELDGRLSSALELGTFAVVLTAFLSVAREGLETALFFWSAVQAAGSTMEPVIGFSLGIAT AVVLAWLLYRRSVRLNLARFFTWTGAGLIVIAAGVLAYAIHDLQEGGVIGGLNTLAFDVSEQISPGSWYGSLLKGVFNFT PQTTVAQAIAWVAYIVPVMALFFLGHRIRSGQPSEPSEPSEPPPVPSGSTS >Mature_291_residues MFANYLIGLREGLEAALVVSILIAYLVKVGRRDRLVVVAGGVALAVAVSVAFGALLTYTSTSLLADFRSQEIFGGTMSAI AVVFVTGMVFWMRRTARSMRAELDGRLSSALELGTFAVVLTAFLSVAREGLETALFFWSAVQAAGSTMEPVIGFSLGIAT AVVLAWLLYRRSVRLNLARFFTWTGAGLIVIAAGVLAYAIHDLQEGGVIGGLNTLAFDVSEQISPGSWYGSLLKGVFNFT PQTTVAQAIAWVAYIVPVMALFFLGHRIRSGQPSEPSEPSEPPPVPSGSTS
Specific function: Functions only as an uptake system for Fe(2+) ion acquisition [H]
COG id: COG0672
COG function: function code P; High-affinity Fe2+/Pb2+ permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005217 - InterPro: IPR004923 [H]
Pfam domain/function: PF03239 FTR1 [H]
EC number: NA
Molecular weight: Translated: 30931; Mature: 30931
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFANYLIGLREGLEAALVVSILIAYLVKVGRRDRLVVVAGGVALAVAVSVAFGALLTYTS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH TSLLADFRSQEIFGGTMSAIAVVFVTGMVFWMRRTARSMRAELDGRLSSALELGTFAVVL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAFLSVAREGLETALFFWSAVQAAGSTMEPVIGFSLGIATAVVLAWLLYRRSVRLNLARF HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTWTGAGLIVIAAGVLAYAIHDLQEGGVIGGLNTLAFDVSEQISPGSWYGSLLKGVFNFT HHHCCCHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHCCC PQTTVAQAIAWVAYIVPVMALFFLGHRIRSGQPSEPSEPSEPPPVPSGSTS CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFANYLIGLREGLEAALVVSILIAYLVKVGRRDRLVVVAGGVALAVAVSVAFGALLTYTS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH TSLLADFRSQEIFGGTMSAIAVVFVTGMVFWMRRTARSMRAELDGRLSSALELGTFAVVL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAFLSVAREGLETALFFWSAVQAAGSTMEPVIGFSLGIATAVVLAWLLYRRSVRLNLARF HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTWTGAGLIVIAAGVLAYAIHDLQEGGVIGGLNTLAFDVSEQISPGSWYGSLLKGVFNFT HHHCCCHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHCCC PQTTVAQAIAWVAYIVPVMALFFLGHRIRSGQPSEPSEPSEPPPVPSGSTS CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]