| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318731
Identifier: 158318731
GI number: 158318731
Start: 8534207
End: 8535751
Strand: Direct
Name: 158318731
Synonym: Franean1_7002
Alternate gene names: NA
Gene position: 8534207-8535751 (Clockwise)
Preceding gene: 158318730
Following gene: 158318732
Centisome position: 95.01
GC content: 69.19
Gene sequence:
>1545_bases ATGGGCTCACTGATCCTGCTGATCATCGCAATCTGGCTGGCCTTCTTTTTCTTCACCGTGCCCGGGCCGTTCATCGCCGG CGCCGCGGCCCTGTACGTCGCCGGGGCACTGGTCGTCGCCTATTTCCAGGAATTCGGCCGGGCGATGGGGCTGGGTCCGA ACCCCGCCGCCGCCGCACCGGAACAACCGCCGCCGCGGCGCACCGAGGACGGGAAGGAACCGGCCTACCGGCAGTACCTG TTCGGACAGGCCCGTCACGATCTACGGCATGCGCACGGTCTCGTCTGGCCGCGGCTGGCCGCGCTCGGCCGGAATCACCG GCGGTGGGTGAAGAACACCTTCTTCGGCTACGGGGCGATGGACTGGCACTGGCCGGTGGGCGTCGTCCTGATGGTCGGCC TGTTCGCCGGGACGATCCTGGGCCTTGCCGTCATCTCGCTGGTGGCGACGGCCCAGGGCGTGGTGCTGCTGGCCGTCTTT CTGCTGGCGTTCCTCGGGATCTACCTGCTGCGCGGCATCGACACCGTCCTGCTGTGGATCCGCGGGGTGCGCATCACCTG CCCGTCTTGCTACCGGCGCGGCTTCTACCCGTCCTACGAGTGCCGGAACTGCACCGTCCGCCACCACGACGTGCGGCCGG GCAGGTACGGCGTCGTCCGGCGCGTCTGCGCGTGCGGGGAGCGCCTGCCGACCCTGCTGCTGTTGGGCAGCCACCGGATG AACGCCTTCTGCGCGCACTGCGAGGCTCCACTGGCCGAGAGCGTGGGCACCGCCGCTGAGGTGGTGCTCCCGGTGTTCGG CGCGGCCGGCGCCGGCAAGACCCGGCTGATGATCGTCATCATGATGGCGGTCGAGGCGATCGCCGGACGCAGCGGCGCCA CCCTCGCCCTGGCCGACGAGGACACCCGGAAATGGGACGCCCAGGCCCGCCGCGAGCTCATCAGGTCGGACAAGGTCGCG AAGACCGGAATCCGGCTTCCCCGCGCCTACTCGCTTTACGTCGAGCCGCGGCGGGGCGGCCGGCGGCTCGTCCACGTCTT CGACCCGGCCGGCGAGTACTTCAACGAATCCGACCGCCTGCAGGAGCTGCAGTTCCTCACCCTCGCGCGCACCTTCCTGT TCGTCGTCGACCCCCTGTCGGTAGACGCGCTGTGGGCCCGGCTCGACCGCGCCGACCAGAACCGGTACAGCGGCGTCCGG GCCAGGCGCGAACCCGAGTTCGTCTTCGCGCAGACGGTCCAGAACCTCGAGGCGATGGGCGTGCGGACGAAGAAGGCCCG GCTGGTCGTGGTCGTGAGCAAACGCGACCTCGTCAGTCGGATCCTGATCGAGGACGGCGTGGAGGACGGCGAGGAGGCCC TCGTGCGCTGGCTCGACGAGAACCTGCACCAGGGAAACATGCTGCGGTCCATGCGGCACGCGTTCGGCGAGGTTCAGTTC TTTCTCACCACCTCCATCATTTCTGACGACAGCCGGGTCGACGACAGCATCGAGAAACTGACGTCCTGGACGCTCGCGCG GCAGGGCCTGCGGCTTTCGGGGTGA
Upstream 100 bases:
>100_bases AAAACGGAACCCTCGTTAGCCGACCGTCACTGTTTTCCAGTTCTGCGATTCGGGGACGCATCCATGAACCACAGCTCGCG GGCGGGGAGGTGAGGCGAGG
Downstream 100 bases:
>100_bases TATCTCGATGAACACGAGAATGGCAACACCGGACGTCTCCGCGGAGCGGGGCCGGTGAGCTCCATGGAGATACAGCCGTA CCGCCGCTGGCGGCAGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MGSLILLIIAIWLAFFFFTVPGPFIAGAAALYVAGALVVAYFQEFGRAMGLGPNPAAAAPEQPPPRRTEDGKEPAYRQYL FGQARHDLRHAHGLVWPRLAALGRNHRRWVKNTFFGYGAMDWHWPVGVVLMVGLFAGTILGLAVISLVATAQGVVLLAVF LLAFLGIYLLRGIDTVLLWIRGVRITCPSCYRRGFYPSYECRNCTVRHHDVRPGRYGVVRRVCACGERLPTLLLLGSHRM NAFCAHCEAPLAESVGTAAEVVLPVFGAAGAGKTRLMIVIMMAVEAIAGRSGATLALADEDTRKWDAQARRELIRSDKVA KTGIRLPRAYSLYVEPRRGGRRLVHVFDPAGEYFNESDRLQELQFLTLARTFLFVVDPLSVDALWARLDRADQNRYSGVR ARREPEFVFAQTVQNLEAMGVRTKKARLVVVVSKRDLVSRILIEDGVEDGEEALVRWLDENLHQGNMLRSMRHAFGEVQF FLTTSIISDDSRVDDSIEKLTSWTLARQGLRLSG
Sequences:
>Translated_514_residues MGSLILLIIAIWLAFFFFTVPGPFIAGAAALYVAGALVVAYFQEFGRAMGLGPNPAAAAPEQPPPRRTEDGKEPAYRQYL FGQARHDLRHAHGLVWPRLAALGRNHRRWVKNTFFGYGAMDWHWPVGVVLMVGLFAGTILGLAVISLVATAQGVVLLAVF LLAFLGIYLLRGIDTVLLWIRGVRITCPSCYRRGFYPSYECRNCTVRHHDVRPGRYGVVRRVCACGERLPTLLLLGSHRM NAFCAHCEAPLAESVGTAAEVVLPVFGAAGAGKTRLMIVIMMAVEAIAGRSGATLALADEDTRKWDAQARRELIRSDKVA KTGIRLPRAYSLYVEPRRGGRRLVHVFDPAGEYFNESDRLQELQFLTLARTFLFVVDPLSVDALWARLDRADQNRYSGVR ARREPEFVFAQTVQNLEAMGVRTKKARLVVVVSKRDLVSRILIEDGVEDGEEALVRWLDENLHQGNMLRSMRHAFGEVQF FLTTSIISDDSRVDDSIEKLTSWTLARQGLRLSG >Mature_513_residues GSLILLIIAIWLAFFFFTVPGPFIAGAAALYVAGALVVAYFQEFGRAMGLGPNPAAAAPEQPPPRRTEDGKEPAYRQYLF GQARHDLRHAHGLVWPRLAALGRNHRRWVKNTFFGYGAMDWHWPVGVVLMVGLFAGTILGLAVISLVATAQGVVLLAVFL LAFLGIYLLRGIDTVLLWIRGVRITCPSCYRRGFYPSYECRNCTVRHHDVRPGRYGVVRRVCACGERLPTLLLLGSHRMN AFCAHCEAPLAESVGTAAEVVLPVFGAAGAGKTRLMIVIMMAVEAIAGRSGATLALADEDTRKWDAQARRELIRSDKVAK TGIRLPRAYSLYVEPRRGGRRLVHVFDPAGEYFNESDRLQELQFLTLARTFLFVVDPLSVDALWARLDRADQNRYSGVRA RREPEFVFAQTVQNLEAMGVRTKKARLVVVVSKRDLVSRILIEDGVEDGEEALVRWLDENLHQGNMLRSMRHAFGEVQFF LTTSIISDDSRVDDSIEKLTSWTLARQGLRLSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57264; Mature: 57133
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSLILLIIAIWLAFFFFTVPGPFIAGAAALYVAGALVVAYFQEFGRAMGLGPNPAAAAP CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC EQPPPRRTEDGKEPAYRQYLFGQARHDLRHAHGLVWPRLAALGRNHRRWVKNTFFGYGAM CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCC DWHWPVGVVLMVGLFAGTILGLAVISLVATAQGVVLLAVFLLAFLGIYLLRGIDTVLLWI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGVRITCPSCYRRGFYPSYECRNCTVRHHDVRPGRYGVVRRVCACGERLPTLLLLGSHRM HCCCEECHHHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCHH NAFCAHCEAPLAESVGTAAEVVLPVFGAAGAGKTRLMIVIMMAVEAIAGRSGATLALADE HHHHHHCCCCHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC DTRKWDAQARRELIRSDKVAKTGIRLPRAYSLYVEPRRGGRRLVHVFDPAGEYFNESDRL HHHHHHHHHHHHHHHHCHHHHHCCCCCCEEEEEEECCCCCCEEEEEECCCCHHCCCHHHH QELQFLTLARTFLFVVDPLSVDALWARLDRADQNRYSGVRARREPEFVFAQTVQNLEAMG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC VRTKKARLVVVVSKRDLVSRILIEDGVEDGEEALVRWLDENLHQGNMLRSMRHAFGEVQF CEECCCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FLTTSIISDDSRVDDSIEKLTSWTLARQGLRLSG EEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GSLILLIIAIWLAFFFFTVPGPFIAGAAALYVAGALVVAYFQEFGRAMGLGPNPAAAAP CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC EQPPPRRTEDGKEPAYRQYLFGQARHDLRHAHGLVWPRLAALGRNHRRWVKNTFFGYGAM CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCC DWHWPVGVVLMVGLFAGTILGLAVISLVATAQGVVLLAVFLLAFLGIYLLRGIDTVLLWI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGVRITCPSCYRRGFYPSYECRNCTVRHHDVRPGRYGVVRRVCACGERLPTLLLLGSHRM HCCCEECHHHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCHH NAFCAHCEAPLAESVGTAAEVVLPVFGAAGAGKTRLMIVIMMAVEAIAGRSGATLALADE HHHHHHCCCCHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC DTRKWDAQARRELIRSDKVAKTGIRLPRAYSLYVEPRRGGRRLVHVFDPAGEYFNESDRL HHHHHHHHHHHHHHHHCHHHHHCCCCCCEEEEEEECCCCCCEEEEEECCCCHHCCCHHHH QELQFLTLARTFLFVVDPLSVDALWARLDRADQNRYSGVRARREPEFVFAQTVQNLEAMG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC VRTKKARLVVVVSKRDLVSRILIEDGVEDGEEALVRWLDENLHQGNMLRSMRHAFGEVQF CEECCCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FLTTSIISDDSRVDDSIEKLTSWTLARQGLRLSG EEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA