| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318730
Identifier: 158318730
GI number: 158318730
Start: 8531462
End: 8534125
Strand: Direct
Name: 158318730
Synonym: Franean1_7001
Alternate gene names: NA
Gene position: 8531462-8534125 (Clockwise)
Preceding gene: 158318729
Following gene: 158318731
Centisome position: 94.98
GC content: 73.01
Gene sequence:
>2664_bases ATGGTGTTGAAGCAGCTGTACTACACGTCGTGCGAGGTCGGCCTTTCGGGATACCCCGGATTCCAGTTCAATGCGGCGAG CCGCGGGGTCGCTCCGGAGGTGATGCGGCGGGTCGAGTCCTTCACCGCCTACGACCCGCCGGGCTCGCTGCCCTACAACG CGGATGCCGCGGCGCTCGCGGCCTGCCCGGTGAATCTCTGCTTCGAGCCGGCGGAGGACACCGGCGTGCTGGCGAACGTC GTCTTCGTGGGCACGGACTACTCGAACCGGTTCGGGAACTACTTCGCGCACGCGTTGGTCAGCGAGGACGTCGCCACCGA TCTCGGGGAGGCGTTGCCCATCGAGCTGTGGGGCGCCCCGATCTGGACGGCCAGCCCGAAGACCGACGGCGCGGAACTGC CGGAGCTGGCCGGGCCGCCGCCACGGGGAAGGCTCGACCGCCGGCACGTCGCCGCCTTCCTGCGTACGCATCCCGGCCGC GCCGCACTGCCCGCCCTGGTGTCCGCGGCGGCCAGGGTGATCACCGGCGAACGGCGAACGATCGTGCTGATCGAGCGGGA CAGCGGGGCCGCCGCGAACTGGATCGGCGCCGTCTCCTACCTGCTGCCGCCGGCGCTGGCCCGCCGGATGTCCTTCGCCA CCTACCACCACCGGCCCGCCTACAGCGACCTGCACCTGGTCGCGACAGTGCCCGACGCCGACGTCGACCGCGGTGACGGC GCGTTCGCGAGCTTCCTCCAGTTCGACATTCCGGCCAACCGGAGCAGCCAGGTGCCGGTCGAGCCGTGGGCCGCCCTGCT GGCCGAGACCGGCGTGGAGAACGCGGCCGAGCTGTGGGCCGCCGCGGCCGAGCTCGGCGGCGGCCTGCCCGTCCGCTCGG GAGAGTGGCATCCGCTGCTGGCCGCGGCGCTGTTCCGGCACGGTCACCAGGCCTCCGGCGCCGGGCCGGCGGTGACGGCC GCCGCCGCGACCGCCGCGCGCTGGCTGGGGCGCCAGGCACCCTCGCTGGACGCGCGAACTATCGAACTGATCGGCGTCGG GGCCCTGGGGGTCCTCGCCGGGAGCCGGCCGCCCGGCACCGGCGCCGCACTCACCGCCCTCGCGGCGGCCGCGGCGGAGG CCGGCGCCGCGCCGCTGGCCACCGAGATCGAGAAGCTGGCGGTGGACATCGAGGTGGACGGGCTGCTGGCGCACGAGCCC GTCAAGGGTGCCGGTGGCGCCGAAGCGGTGCCGCTCAGGTCGCCTGCCGGTCGCGCCCACGCCACCGACCGCTGCACGCG AGCCCTGCGCAGATGCACCGCCGAGGTGGCGGTCGATCTGCTCCTCCTGGCTGCCCGGGAGCGGCTCGACCTGGACAGCG CCCTGCTGCGGACGGCCGGAGAACGCGTCGTCGGCCCCCGGCTGCTGGCCGAGCCGACCGAGGCGACGGCACGGCTGGCA CGTGGCTGGCCCCAGCTGCGGGCGGGGGTGGTGCATCACCTCGCCGCGGTCGCGGCACGCGAGCCGGACCGTCTCGTCGA GGCGCTCACGCACGGCCTCGGTGAGGCGCTGGACGACGACGACACGCGTGCTGCCCCGGCTCTGCACGAAGCCCGGCTGA TCGCCGCGTCCCGCCGCGACCCGCGGCTGCGGATCGACATGCTGGCGGAGATCGCGATGCTGCGGGCAAGCGGTCCGGAA TCGACGGGCACACCGGCCGTGGACGCGGACCTGTTGCGGCGCGTCTGGCCGCACGGAAGCTGGACGCCGGGCGAGGCACT GCGCGCACTTGAGGTGCTCGACGAAGCCAGCCTGAATGCTCCCGCCACCGTGGCCTGGCTGAACGCCGTCCTCACCCGCG AGTGGCCGGCGACGGCCGCAGCGGACGGCGACCATCTCGAGGACCTCGAAGCCCTCTGCCACGCGTTCGAGGGGAGGCCA GCCGCGTCCCGGCTCAGTGACCCCGCACGCGCGACGATCACCCGGATGACCACGGTCAGACGCAGGCTGGCCGCTGCCAC CGGCCCTGGCCGCCAGGCCGCCGTCCTGACCGCCGGGCTCGACCGGATGCCCGAGACGCAGCGGGCACACCACCTCAGCA AACTGACCGACCTGCTGAACAAGGCACCGGCCGGGGACCTCCCCGAGATCTTCGCGTCGTGCCCCGCGGAGGCCGTGGAG CACTACCTGCTCGACGTCGACACCTATCTCAGGGCCGACCGTGCCCAGACGGACATCGCCGGCCGTCTCTTCTACGCGGT GGTCATCCTGCGGCGCAATCCGTCCCGCAAGGTCCGCGTCGTCGCCACGGTCATCGAGGACCGCCTGCTGGACAGGCTGA TCACATGGCACTGGCAGGACCTGCGCGCCCTGCATGTCTGGATCAGGAAGCTCGATCCCGCGGTGGCCACGGATTTCGCC AACTGGCGGGACCTCAACGCCGCCGGATGGCTGCGCCGGACCCTGACGCGGCGTCGGCTGGAGAAGGAGGCCGACGCGCC ACGGAGGGCGGCGGAGAAGAAGGCCCGGGCCGAGCGGAAGGCCGCGGCGGAGAAGAAGGCCGCCGCCGCACAGAAGGCCG CCGACAAGAAACGCTCGGGAAGCGGAGGGAAGAACGGTAAGAACGGGAAATCTGGGACGGAAGCCCAAGGGAAGGCTGCG GCGAAAAAACGGAACCCTCGTTAG
Upstream 100 bases:
>100_bases GGGTGGTCCAGCCCTACCGGGTGGCCGACCCGTTCCTCTGGCTGCTGAGCGAATTCGGCGCCATTCCCAGAACAAAAGGC TGACGGCGGAAGAGGCCGAG
Downstream 100 bases:
>100_bases CCGACCGTCACTGTTTTCCAGTTCTGCGATTCGGGGACGCATCCATGAACCACAGCTCGCGGGCGGGGAGGTGAGGCGAG GATGGGCTCACTGATCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 887; Mature: 887
Protein sequence:
>887_residues MVLKQLYYTSCEVGLSGYPGFQFNAASRGVAPEVMRRVESFTAYDPPGSLPYNADAAALAACPVNLCFEPAEDTGVLANV VFVGTDYSNRFGNYFAHALVSEDVATDLGEALPIELWGAPIWTASPKTDGAELPELAGPPPRGRLDRRHVAAFLRTHPGR AALPALVSAAARVITGERRTIVLIERDSGAAANWIGAVSYLLPPALARRMSFATYHHRPAYSDLHLVATVPDADVDRGDG AFASFLQFDIPANRSSQVPVEPWAALLAETGVENAAELWAAAAELGGGLPVRSGEWHPLLAAALFRHGHQASGAGPAVTA AAATAARWLGRQAPSLDARTIELIGVGALGVLAGSRPPGTGAALTALAAAAAEAGAAPLATEIEKLAVDIEVDGLLAHEP VKGAGGAEAVPLRSPAGRAHATDRCTRALRRCTAEVAVDLLLLAARERLDLDSALLRTAGERVVGPRLLAEPTEATARLA RGWPQLRAGVVHHLAAVAAREPDRLVEALTHGLGEALDDDDTRAAPALHEARLIAASRRDPRLRIDMLAEIAMLRASGPE STGTPAVDADLLRRVWPHGSWTPGEALRALEVLDEASLNAPATVAWLNAVLTREWPATAAADGDHLEDLEALCHAFEGRP AASRLSDPARATITRMTTVRRRLAAATGPGRQAAVLTAGLDRMPETQRAHHLSKLTDLLNKAPAGDLPEIFASCPAEAVE HYLLDVDTYLRADRAQTDIAGRLFYAVVILRRNPSRKVRVVATVIEDRLLDRLITWHWQDLRALHVWIRKLDPAVATDFA NWRDLNAAGWLRRTLTRRRLEKEADAPRRAAEKKARAERKAAAEKKAAAAQKAADKKRSGSGGKNGKNGKSGTEAQGKAA AKKRNPR
Sequences:
>Translated_887_residues MVLKQLYYTSCEVGLSGYPGFQFNAASRGVAPEVMRRVESFTAYDPPGSLPYNADAAALAACPVNLCFEPAEDTGVLANV VFVGTDYSNRFGNYFAHALVSEDVATDLGEALPIELWGAPIWTASPKTDGAELPELAGPPPRGRLDRRHVAAFLRTHPGR AALPALVSAAARVITGERRTIVLIERDSGAAANWIGAVSYLLPPALARRMSFATYHHRPAYSDLHLVATVPDADVDRGDG AFASFLQFDIPANRSSQVPVEPWAALLAETGVENAAELWAAAAELGGGLPVRSGEWHPLLAAALFRHGHQASGAGPAVTA AAATAARWLGRQAPSLDARTIELIGVGALGVLAGSRPPGTGAALTALAAAAAEAGAAPLATEIEKLAVDIEVDGLLAHEP VKGAGGAEAVPLRSPAGRAHATDRCTRALRRCTAEVAVDLLLLAARERLDLDSALLRTAGERVVGPRLLAEPTEATARLA RGWPQLRAGVVHHLAAVAAREPDRLVEALTHGLGEALDDDDTRAAPALHEARLIAASRRDPRLRIDMLAEIAMLRASGPE STGTPAVDADLLRRVWPHGSWTPGEALRALEVLDEASLNAPATVAWLNAVLTREWPATAAADGDHLEDLEALCHAFEGRP AASRLSDPARATITRMTTVRRRLAAATGPGRQAAVLTAGLDRMPETQRAHHLSKLTDLLNKAPAGDLPEIFASCPAEAVE HYLLDVDTYLRADRAQTDIAGRLFYAVVILRRNPSRKVRVVATVIEDRLLDRLITWHWQDLRALHVWIRKLDPAVATDFA NWRDLNAAGWLRRTLTRRRLEKEADAPRRAAEKKARAERKAAAEKKAAAAQKAADKKRSGSGGKNGKNGKSGTEAQGKAA AKKRNPR >Mature_887_residues MVLKQLYYTSCEVGLSGYPGFQFNAASRGVAPEVMRRVESFTAYDPPGSLPYNADAAALAACPVNLCFEPAEDTGVLANV VFVGTDYSNRFGNYFAHALVSEDVATDLGEALPIELWGAPIWTASPKTDGAELPELAGPPPRGRLDRRHVAAFLRTHPGR AALPALVSAAARVITGERRTIVLIERDSGAAANWIGAVSYLLPPALARRMSFATYHHRPAYSDLHLVATVPDADVDRGDG AFASFLQFDIPANRSSQVPVEPWAALLAETGVENAAELWAAAAELGGGLPVRSGEWHPLLAAALFRHGHQASGAGPAVTA AAATAARWLGRQAPSLDARTIELIGVGALGVLAGSRPPGTGAALTALAAAAAEAGAAPLATEIEKLAVDIEVDGLLAHEP VKGAGGAEAVPLRSPAGRAHATDRCTRALRRCTAEVAVDLLLLAARERLDLDSALLRTAGERVVGPRLLAEPTEATARLA RGWPQLRAGVVHHLAAVAAREPDRLVEALTHGLGEALDDDDTRAAPALHEARLIAASRRDPRLRIDMLAEIAMLRASGPE STGTPAVDADLLRRVWPHGSWTPGEALRALEVLDEASLNAPATVAWLNAVLTREWPATAAADGDHLEDLEALCHAFEGRP AASRLSDPARATITRMTTVRRRLAAATGPGRQAAVLTAGLDRMPETQRAHHLSKLTDLLNKAPAGDLPEIFASCPAEAVE HYLLDVDTYLRADRAQTDIAGRLFYAVVILRRNPSRKVRVVATVIEDRLLDRLITWHWQDLRALHVWIRKLDPAVATDFA NWRDLNAAGWLRRTLTRRRLEKEADAPRRAAEKKARAERKAAAEKKAAAAQKAADKKRSGSGGKNGKNGKSGTEAQGKAA AKKRNPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94530; Mature: 94530
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLKQLYYTSCEVGLSGYPGFQFNAASRGVAPEVMRRVESFTAYDPPGSLPYNADAAALA CCHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHH ACPVNLCFEPAEDTGVLANVVFVGTDYSNRFGNYFAHALVSEDVATDLGEALPIELWGAP HCCHHHCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC IWTASPKTDGAELPELAGPPPRGRLDRRHVAAFLRTHPGRAALPALVSAAARVITGERRT EECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEE IVLIERDSGAAANWIGAVSYLLPPALARRMSFATYHHRPAYSDLHLVATVPDADVDRGDG EEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCC AFASFLQFDIPANRSSQVPVEPWAALLAETGVENAAELWAAAAELGGGLPVRSGEWHPLL HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHH AAALFRHGHQASGAGPAVTAAAATAARWLGRQAPSLDARTIELIGVGALGVLAGSRPPGT HHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHCCCCCCCC GAALTALAAAAAEAGAAPLATEIEKLAVDIEVDGLLAHEPVKGAGGAEAVPLRSPAGRAH HHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCH ATDRCTRALRRCTAEVAVDLLLLAARERLDLDSALLRTAGERVVGPRLLAEPTEATARLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHCCCHHHCCCHHHHHHHH RGWPQLRAGVVHHLAAVAAREPDRLVEALTHGLGEALDDDDTRAAPALHEARLIAASRRD HCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC PRLRIDMLAEIAMLRASGPESTGTPAVDADLLRRVWPHGSWTPGEALRALEVLDEASLNA CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC PATVAWLNAVLTREWPATAAADGDHLEDLEALCHAFEGRPAASRLSDPARATITRMTTVR CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHH RRLAAATGPGRQAAVLTAGLDRMPETQRAHHLSKLTDLLNKAPAGDLPEIFASCPAEAVE HHHHHCCCCCCCEEHEECCHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHH HYLLDVDTYLRADRAQTDIAGRLFYAVVILRRNPSRKVRVVATVIEDRLLDRLITWHWQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LRALHVWIRKLDPAVATDFANWRDLNAAGWLRRTLTRRRLEKEADAPRRAAEKKARAERK HHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AAAEKKAAAAQKAADKKRSGSGGKNGKNGKSGTEAQGKAAAKKRNPR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure MVLKQLYYTSCEVGLSGYPGFQFNAASRGVAPEVMRRVESFTAYDPPGSLPYNADAAALA CCHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHH ACPVNLCFEPAEDTGVLANVVFVGTDYSNRFGNYFAHALVSEDVATDLGEALPIELWGAP HCCHHHCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC IWTASPKTDGAELPELAGPPPRGRLDRRHVAAFLRTHPGRAALPALVSAAARVITGERRT EECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEE IVLIERDSGAAANWIGAVSYLLPPALARRMSFATYHHRPAYSDLHLVATVPDADVDRGDG EEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCC AFASFLQFDIPANRSSQVPVEPWAALLAETGVENAAELWAAAAELGGGLPVRSGEWHPLL HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHH AAALFRHGHQASGAGPAVTAAAATAARWLGRQAPSLDARTIELIGVGALGVLAGSRPPGT HHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHCCCCCCCC GAALTALAAAAAEAGAAPLATEIEKLAVDIEVDGLLAHEPVKGAGGAEAVPLRSPAGRAH HHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCH ATDRCTRALRRCTAEVAVDLLLLAARERLDLDSALLRTAGERVVGPRLLAEPTEATARLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHCCCHHHCCCHHHHHHHH RGWPQLRAGVVHHLAAVAAREPDRLVEALTHGLGEALDDDDTRAAPALHEARLIAASRRD HCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC PRLRIDMLAEIAMLRASGPESTGTPAVDADLLRRVWPHGSWTPGEALRALEVLDEASLNA CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC PATVAWLNAVLTREWPATAAADGDHLEDLEALCHAFEGRPAASRLSDPARATITRMTTVR CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHH RRLAAATGPGRQAAVLTAGLDRMPETQRAHHLSKLTDLLNKAPAGDLPEIFASCPAEAVE HHHHHCCCCCCCEEHEECCHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHH HYLLDVDTYLRADRAQTDIAGRLFYAVVILRRNPSRKVRVVATVIEDRLLDRLITWHWQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LRALHVWIRKLDPAVATDFANWRDLNAAGWLRRTLTRRRLEKEADAPRRAAEKKARAERK HHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AAAEKKAAAAQKAADKKRSGSGGKNGKNGKSGTEAQGKAAAKKRNPR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA