| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318725
Identifier: 158318725
GI number: 158318725
Start: 8523354
End: 8524562
Strand: Direct
Name: 158318725
Synonym: Franean1_6996
Alternate gene names: NA
Gene position: 8523354-8524562 (Clockwise)
Preceding gene: 158318723
Following gene: 158318726
Centisome position: 94.89
GC content: 66.67
Gene sequence:
>1209_bases GTGTCGCTGACGATGCTCCCCCAGATCGCGCTCCGCCCGCGGCGGATCCACGTGGTTCTGAACTGGGTGAAAACCCCTAC CACACCCCAGCTCGACCTCATCCTCGTGCTCCCCGCGAACAATGCCGGGGCGGCGGGGTCCGCGCGCGCGATTCAGTTCG CCGATCCTACGGATCCCACCGACTCCAGCGCGGCGGTACGGCATCTGAGCAGGACGGACGCGGCGGTGTCCACCGACCGA GCCCAGGTCGACCTGAACGCCGTCCCCCCGCGGTACGACCAGATCCTGATGGCCCTGTCGGCCACGGGCGGCCGAGTGGT CGACGTGCCCGAAACACGGCTGCGCCTGATCGACGCGGAAGACAACACGGAGATACTCCGGATCGATCTCGCCCCGGGCC CGGCGGACCTCGTCCACATACCCGGCGAGCTGTACCGGCGTGCGGACGGCTGGTACTACCGGGCGGTCGGGTTCGGATTC ACGGACGGGCTGACCGGTCTGAGCTTCCGCTTCGCGGTCCCGATCAACGACATACTGCGGCGTCAGCAGGTTCCTGCCAC CGATGTGGCACCGGACGCGGCCGAGAGCAAGGAAGAGAGCGGGTCGGAGAAGGCCGAACGGCGCGCCTCCTCCGCTCGTG CGGTAACTCCACTCGGGGACGTGAAGCTGCTGCCCGGCGCGTCCGCGACCATCAAAAGGCCCCAGCACGAGATCACAGCG GAGCTGACCTGGCGACGCAAGGACAAGGACCTCGACCTCTACGCGCTCTACATCGACAGCGACGGTCGCGAGGGTGTCTG TTACTACCGTGACCAGGGCTCCCTCAAGCGGCCGCCGCACATCTGCCTGACGACCGGAGACCGTCATCGGGGCCGGGAGG CGATCGTGATCGCCCAGCCGAGCGCCTTCCGACACATCCTCATCTGCGCGTACTCGGCGGTCGAGAACGGCATCGGGTCG TTCCGTGGATTCCGGGCGGTCGTGGAGGTCGACGACCATGCCGGTTCGGTGATACAAACACCTCTGTACCACCGGAACAG CTTCTCCTACTGGGTTGCGATAGCGCGCATCGACCTCACCGCAGAGGAGGAGGCCGTCATCGAACACGTGGAGACATACT CGCGTCCCCGCAGCGAGCGACGACCGGTCCTCCGTGGTGACGGAACCTTCGTCATGGACGCAGGGCGAGTGGAGTTCAAG ACACGTTGA
Upstream 100 bases:
>100_bases GCTGTCACCATGGCGGTACCCGCGTAACCAGTTCGGCGGACCGGGCACACCCCGGACCGGTCCGGGGTTACCATCACAGC GACTCAGGAGAGTACTGCTC
Downstream 100 bases:
>100_bases GAGACGGCTGACAGGTTTCCCCCGGCACCGGTCAGCCCTGCGCCACAGGCTCGGCACCAGCTGTGCTTATAGTTGCTAGG ACATCGGGGGACGTCATGAT
Product: stress protein
Products: NA
Alternate protein names: Stress Protein; Bacterial Stress Protein; Resistance Protein; Stress Response Protein
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MSLTMLPQIALRPRRIHVVLNWVKTPTTPQLDLILVLPANNAGAAGSARAIQFADPTDPTDSSAAVRHLSRTDAAVSTDR AQVDLNAVPPRYDQILMALSATGGRVVDVPETRLRLIDAEDNTEILRIDLAPGPADLVHIPGELYRRADGWYYRAVGFGF TDGLTGLSFRFAVPINDILRRQQVPATDVAPDAAESKEESGSEKAERRASSARAVTPLGDVKLLPGASATIKRPQHEITA ELTWRRKDKDLDLYALYIDSDGREGVCYYRDQGSLKRPPHICLTTGDRHRGREAIVIAQPSAFRHILICAYSAVENGIGS FRGFRAVVEVDDHAGSVIQTPLYHRNSFSYWVAIARIDLTAEEEAVIEHVETYSRPRSERRPVLRGDGTFVMDAGRVEFK TR
Sequences:
>Translated_402_residues MSLTMLPQIALRPRRIHVVLNWVKTPTTPQLDLILVLPANNAGAAGSARAIQFADPTDPTDSSAAVRHLSRTDAAVSTDR AQVDLNAVPPRYDQILMALSATGGRVVDVPETRLRLIDAEDNTEILRIDLAPGPADLVHIPGELYRRADGWYYRAVGFGF TDGLTGLSFRFAVPINDILRRQQVPATDVAPDAAESKEESGSEKAERRASSARAVTPLGDVKLLPGASATIKRPQHEITA ELTWRRKDKDLDLYALYIDSDGREGVCYYRDQGSLKRPPHICLTTGDRHRGREAIVIAQPSAFRHILICAYSAVENGIGS FRGFRAVVEVDDHAGSVIQTPLYHRNSFSYWVAIARIDLTAEEEAVIEHVETYSRPRSERRPVLRGDGTFVMDAGRVEFK TR >Mature_401_residues SLTMLPQIALRPRRIHVVLNWVKTPTTPQLDLILVLPANNAGAAGSARAIQFADPTDPTDSSAAVRHLSRTDAAVSTDRA QVDLNAVPPRYDQILMALSATGGRVVDVPETRLRLIDAEDNTEILRIDLAPGPADLVHIPGELYRRADGWYYRAVGFGFT DGLTGLSFRFAVPINDILRRQQVPATDVAPDAAESKEESGSEKAERRASSARAVTPLGDVKLLPGASATIKRPQHEITAE LTWRRKDKDLDLYALYIDSDGREGVCYYRDQGSLKRPPHICLTTGDRHRGREAIVIAQPSAFRHILICAYSAVENGIGSF RGFRAVVEVDDHAGSVIQTPLYHRNSFSYWVAIARIDLTAEEEAVIEHVETYSRPRSERRPVLRGDGTFVMDAGRVEFKT R
Specific function: Unknown
COG id: COG2310
COG function: function code T; Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44425; Mature: 44294
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTMLPQIALRPRRIHVVLNWVKTPTTPQLDLILVLPANNAGAAGSARAIQFADPTDPT CCCCCCCHHHCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCC DSSAAVRHLSRTDAAVSTDRAQVDLNAVPPRYDQILMALSATGGRVVDVPETRLRLIDAE CCHHHHHHHHHCCCCEECCCEEEEECCCCCHHHHHHEEEECCCCEEEECCCCCEEEEECC DNTEILRIDLAPGPADLVHIPGELYRRADGWYYRAVGFGFTDGLTGLSFRFAVPINDILR CCCEEEEEEECCCCCCEEECCHHHHHCCCCEEEEEEECCCCCCCCCCEEEEECCHHHHHH RQQVPATDVAPDAAESKEESGSEKAERRASSARAVTPLGDVKLLPGASATIKRPQHEITA HCCCCCCCCCCCCHHCHHHCCHHHHHHHHHCCCEECCCCCEEECCCCCCCCCCCCCEEEE ELTWRRKDKDLDLYALYIDSDGREGVCYYRDQGSLKRPPHICLTTGDRHRGREAIVIAQP EEEEECCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCEEEEEECC SAFRHILICAYSAVENGIGSFRGFRAVVEVDDHAGSVIQTPLYHRNSFSYWVAIARIDLT CHHEEEEEEEHHHHHHCCHHHCCEEEEEEECCCCCCEEECCCEECCCCEEEEEEEEEECC AEEEAVIEHVETYSRPRSERRPVLRGDGTFVMDAGRVEFKTR CCHHHHHHHHHHHCCCHHHCCCEEECCCCEEEECCEEEEECC >Mature Secondary Structure SLTMLPQIALRPRRIHVVLNWVKTPTTPQLDLILVLPANNAGAAGSARAIQFADPTDPT CCCCCCHHHCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCC DSSAAVRHLSRTDAAVSTDRAQVDLNAVPPRYDQILMALSATGGRVVDVPETRLRLIDAE CCHHHHHHHHHCCCCEECCCEEEEECCCCCHHHHHHEEEECCCCEEEECCCCCEEEEECC DNTEILRIDLAPGPADLVHIPGELYRRADGWYYRAVGFGFTDGLTGLSFRFAVPINDILR CCCEEEEEEECCCCCCEEECCHHHHHCCCCEEEEEEECCCCCCCCCCEEEEECCHHHHHH RQQVPATDVAPDAAESKEESGSEKAERRASSARAVTPLGDVKLLPGASATIKRPQHEITA HCCCCCCCCCCCCHHCHHHCCHHHHHHHHHCCCEECCCCCEEECCCCCCCCCCCCCEEEE ELTWRRKDKDLDLYALYIDSDGREGVCYYRDQGSLKRPPHICLTTGDRHRGREAIVIAQP EEEEECCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCEEEEEECC SAFRHILICAYSAVENGIGSFRGFRAVVEVDDHAGSVIQTPLYHRNSFSYWVAIARIDLT CHHEEEEEEEHHHHHHCCHHHCCEEEEEEECCCCCCEEECCCEECCCCEEEEEEEEEECC AEEEAVIEHVETYSRPRSERRPVLRGDGTFVMDAGRVEFKTR CCHHHHHHHHHHHCCCHHHCCCEEECCCCEEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA