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The map label for this gene is glcD [H]

Identifier: 158318699

GI number: 158318699

Start: 8493073

End: 8493345

Strand: Reverse

Name: glcD [H]

Synonym: Franean1_6967

Alternate gene names: 158318699

Gene position: 8493345-8493073 (Counterclockwise)

Preceding gene: 158318700

Following gene: 158318696

Centisome position: 94.56

GC content: 72.89

Gene sequence:

>273_bases
GTGATCGCGCACGCCGGCGACGGCAACACGCACCCGCTGATCATCGCCGACCGCACCGACCCCGAGCAGACGGCTCGGGC
CGAGACGGCCTACGGCGAGGTCATGGACCTGGCCATCGCGCTCGGCGGCACCATCACCGGCGAGCACGGGGCGGGCCGCC
TGAAGAAGCCGTGGCTGCCCGGCTACCTCGGCCCGGACGTCCTGCGGCTGAACCAGCGCATCAAGGACGCCCTCGACCCG
CTCGGCATCCTCAACCCGGGCGCGGTGCTCTGA

Upstream 100 bases:

>100_bases
GTGAAGTACGGGGTCACCACGGACTACGTGCTGGCGCTGACCGTCGTGCTCGCCGACGGGACGGTCGTCCAGCGCCGACC
AGCGGCAGGTCGAGATCGCG

Downstream 100 bases:

>100_bases
GCTCCGCACCGTCGGGTTGCCTCTACTGGCAGTCCGTGATGCCCAGCGCGGCCACGAGGGCCGCGGTCAGGGGGGCGCGC
AGCTCGTCGACCGACACCGC

Product: putative oxidoreductase

Products: 2-oxo acid; H2O2

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MIAHAGDGNTHPLIIADRTDPEQTARAETAYGEVMDLAIALGGTITGEHGAGRLKKPWLPGYLGPDVLRLNQRIKDALDP
LGILNPGAVL

Sequences:

>Translated_90_residues
MIAHAGDGNTHPLIIADRTDPEQTARAETAYGEVMDLAIALGGTITGEHGAGRLKKPWLPGYLGPDVLRLNQRIKDALDP
LGILNPGAVL
>Mature_90_residues
MIAHAGDGNTHPLIIADRTDPEQTARAETAYGEVMDLAIALGGTITGEHGAGRLKKPWLPGYLGPDVLRLNQRIKDALDP
LGILNPGAVL

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI37595754, Length=90, Percent_Identity=36.6666666666667, Blast_Score=64, Evalue=3e-11,
Organism=Homo sapiens, GI37595756, Length=90, Percent_Identity=36.6666666666667, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1789351, Length=86, Percent_Identity=44.1860465116279, Blast_Score=81, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71992381, Length=90, Percent_Identity=38.8888888888889, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71992392, Length=90, Percent_Identity=38.8888888888889, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71992373, Length=90, Percent_Identity=38.8888888888889, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: 1.1.3.15

Molecular weight: Translated: 9491; Mature: 9491

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAHAGDGNTHPLIIADRTDPEQTARAETAYGEVMDLAIALGGTITGEHGAGRLKKPWLP
CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GYLGPDVLRLNQRIKDALDPLGILNPGAVL
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIAHAGDGNTHPLIIADRTDPEQTARAETAYGEVMDLAIALGGTITGEHGAGRLKKPWLP
CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GYLGPDVLRLNQRIKDALDPLGILNPGAVL
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: (S)-2-hydroxy acid; O2

Specific reaction: (S)-2-hydroxy acid + O2 = 2-oxo acid + H2O2

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]