Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318661

Identifier: 158318661

GI number: 158318661

Start: 8440729

End: 8440872

Strand: Direct

Name: 158318661

Synonym: Franean1_6929

Alternate gene names: NA

Gene position: 8440729-8440872 (Clockwise)

Preceding gene: 158318654

Following gene: 158318662

Centisome position: 93.97

GC content: 70.14

Gene sequence:

>144_bases
GTGATCACCGGGTGTAGCCGCGCGGAGGACGTCCGGCACGTGTTCGCCTCCTCCGACCGGGCCGGTGACGTCCTCGGTTT
CCGGGCCGCCGTCGACTTCGACAAGGGCGTCGTCGACTTCGCCCACGCACCGCTGCGCATCTGA

Upstream 100 bases:

>100_bases
CGAGCAGCGCGCCGGCCGCCGCCGCCGTCCAGGTGGTCGGGAGCGCGCCATCGGTGACCTGGCGCATGCCCTCTCGCGGG
CCCACGGCGCGGCCGAGCCG

Downstream 100 bases:

>100_bases
CCAGCGCCGGGAAGGACGTTCGACCCGCCGGCACCGGGCCGAAGAGCGCTTCCCGCCCGACCCCGTGGTGAAGAAAGTTG
CGGGGTGGAAATCCGACGAT

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 47; Mature: 47

Protein sequence:

>47_residues
MITGCSRAEDVRHVFASSDRAGDVLGFRAAVDFDKGVVDFAHAPLRI

Sequences:

>Translated_47_residues
MITGCSRAEDVRHVFASSDRAGDVLGFRAAVDFDKGVVDFAHAPLRI
>Mature_47_residues
MITGCSRAEDVRHVFASSDRAGDVLGFRAAVDFDKGVVDFAHAPLRI

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5077; Mature: 5077

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITGCSRAEDVRHVFASSDRAGDVLGFRAAVDFDKGVVDFAHAPLRI
CCCCCCCHHHHHHHHHCCCCCCCEEECEEECCCCCCCEECCCCCCCC
>Mature Secondary Structure
MITGCSRAEDVRHVFASSDRAGDVLGFRAAVDFDKGVVDFAHAPLRI
CCCCCCCHHHHHHHHHCCCCCCCEEECEEECCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA