| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318615
Identifier: 158318615
GI number: 158318615
Start: 8388659
End: 8389255
Strand: Direct
Name: 158318615
Synonym: Franean1_6883
Alternate gene names: NA
Gene position: 8388659-8389255 (Clockwise)
Preceding gene: 158318614
Following gene: 158318616
Centisome position: 93.39
GC content: 67.17
Gene sequence:
>597_bases ATGGCACTGGGTACAGAAAGTTCCGGTTCGAATACGGCTCCGGATAGCACACGCGCGCCTTCGGCGGGGCTCGGTATCGC CGTCGCGTTGTTGACCGGAGTGGCGGTCACACTGGCGCTGGCGGTCTACTCGAAGACCCACGACCCCGCCCGTCGGCCGC TGTTCACCCTGGGTTTCTCCGGCATGCTGCCGATGAAGGCCTGGCTCACCACGGCCGCGGCCATCCTCCTGTTCGTCCAG CTCACGACCGCCCTGTGGATGTGGGGGCGGCTGCCCGGAGCCGGCCGGGCACCCGGCTGGACGGCGCCCGTACACCGCTG GAGCGGCACGGTCGCGTTCGTGCTGACGCTGCCCGTCGCGTTCCACTGCATCTGGGCCCTCGGATTCGCCAGCAGCGATT CTCGCGTGCTCGTGCACAGCCTCGCGGGATGTGTCTTCTACGGCGCCTACGCGGCGAAAATGCTCGGCCTGCGGACGCGA AAACTCCCGGGATGGGCACTGCCGGTACTGGGATCGGCGGTTCTCCTCTCCCTCGTCGTGCTCTGGCTGAGCGCGTCGCT GTGGTTTTTCACCCGTACCGACATCCCGAAATTCTGA
Upstream 100 bases:
>100_bases CGTTCCGTCGGCGGGCTGTCAGCCGAGCGACGAAGCTAGACCGCACCCCCCTTTTTGCTGCATAGTGCGCCGAGCGGGAA TGTTGGCGAACGGGGGGCGG
Downstream 100 bases:
>100_bases GGAAGGCCGGCATGACGCAGGAAGCTCCGACCCGGCGCGTGGTCGTACCCGGCCTCATCGTGACCGCGGCGGGTGCCGCC GCCGGCTATGTGGTGGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MALGTESSGSNTAPDSTRAPSAGLGIAVALLTGVAVTLALAVYSKTHDPARRPLFTLGFSGMLPMKAWLTTAAAILLFVQ LTTALWMWGRLPGAGRAPGWTAPVHRWSGTVAFVLTLPVAFHCIWALGFASSDSRVLVHSLAGCVFYGAYAAKMLGLRTR KLPGWALPVLGSAVLLSLVVLWLSASLWFFTRTDIPKF
Sequences:
>Translated_198_residues MALGTESSGSNTAPDSTRAPSAGLGIAVALLTGVAVTLALAVYSKTHDPARRPLFTLGFSGMLPMKAWLTTAAAILLFVQ LTTALWMWGRLPGAGRAPGWTAPVHRWSGTVAFVLTLPVAFHCIWALGFASSDSRVLVHSLAGCVFYGAYAAKMLGLRTR KLPGWALPVLGSAVLLSLVVLWLSASLWFFTRTDIPKF >Mature_197_residues ALGTESSGSNTAPDSTRAPSAGLGIAVALLTGVAVTLALAVYSKTHDPARRPLFTLGFSGMLPMKAWLTTAAAILLFVQL TTALWMWGRLPGAGRAPGWTAPVHRWSGTVAFVLTLPVAFHCIWALGFASSDSRVLVHSLAGCVFYGAYAAKMLGLRTRK LPGWALPVLGSAVLLSLVVLWLSASLWFFTRTDIPKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21013; Mature: 20882
Theoretical pI: Translated: 11.24; Mature: 11.24
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALGTESSGSNTAPDSTRAPSAGLGIAVALLTGVAVTLALAVYSKTHDPARRPLFTLGFS CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCC GMLPMKAWLTTAAAILLFVQLTTALWMWGRLPGAGRAPGWTAPVHRWSGTVAFVLTLPVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHH FHCIWALGFASSDSRVLVHSLAGCVFYGAYAAKMLGLRTRKLPGWALPVLGSAVLLSLVV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LWLSASLWFFTRTDIPKF HHHHHHHHEEECCCCCCC >Mature Secondary Structure ALGTESSGSNTAPDSTRAPSAGLGIAVALLTGVAVTLALAVYSKTHDPARRPLFTLGFS CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCC GMLPMKAWLTTAAAILLFVQLTTALWMWGRLPGAGRAPGWTAPVHRWSGTVAFVLTLPVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHH FHCIWALGFASSDSRVLVHSLAGCVFYGAYAAKMLGLRTRKLPGWALPVLGSAVLLSLVV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LWLSASLWFFTRTDIPKF HHHHHHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA