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The map label for this gene is mmgC [H]

Identifier: 158318580

GI number: 158318580

Start: 8348551

End: 8349756

Strand: Reverse

Name: mmgC [H]

Synonym: Franean1_6848

Alternate gene names: 158318580

Gene position: 8349756-8348551 (Counterclockwise)

Preceding gene: 158318581

Following gene: 158318579

Centisome position: 92.96

GC content: 73.88

Gene sequence:

>1206_bases
ATGAACACGTCCACCGAGGACCTGGCGGAGTTCCGCGCCGAGGTCCGCCGCTGGTGCCGGGAGCATGTGCCGGCCGACTG
GCGGCGCGCGCAGACGGTCGCCGGCGACGCCGAGTTCGTGGCCTTCCAGCAGGCCTGGTTCCAGGAGCTGCGCACGGGCG
GCTACGCCGTCCCGCACTGGCCCGCCGAGTGGGGCGGCGGCATGCCGGCCGCCCAGCAGGTGGTGCTGTACCAGGAGCTG
GCGGCCCACGACGCGCCGCGACTGGTGCTCGGCTTCGTCTCCATCCACCATGCCGCCTCGACGCTGCTCGCCGCGGGCAC
CGACGAGCAGCGGGCGCGGCACCTGCCCGCGATCCTCGACGGCGAGATCTGGGTGCAGGGCTTCTCCGAGCCCGAGGCCG
GATCCGACCTGGCCGGCCTGCGCACCACCGCGCGTCGCGAGGGCGACGGCTTCGTCGTCGACGGGCAGAAGCTGTGGGCC
AGCGGCGCCGCGCACGCCGACTGGTGCCTGCTGCTGGCCCGCACCGATCCCGCCGCGCCCAAACGGCGCGGGATCTCCTA
CTTCCTGATGGACATGCGCTCACCCGGGCTGGACGTCCGTCCGGTGCGCAACGCGGCCGGCGAGTCGCACTTCTGCGAGA
TCTTCCTCAACGGGGTGGTGATCCCGGCCGAGAACCTGGTCGGCCCGGTGAACCAGGGCTGGCAGGTGGCCCAGGCGACG
CTCAGCGCCGAGCGGGGGATGACGATGCTCGAACTGGCCGAACGGCTGGGCAACGCCGGGTTCCGCTGGCTGGTCGAGGC
GTGCCGGGGGCCGGCACCCGGCGGGGGGCGGCTCGTCGACGATCCCCGGGTGCAGGACCGCCTGGCCGAGCTGGAGACCG
AGATCGCCGGCCTGCGGGCGCTGTGCCTGGGGCTGGTCGAGCGGCACGAGGCCGGCACCGCCGGCCCGGCCGACGCCTCG
GTCGTCAAGCTCTACTACAGCGAGCTGCTCCAGCGGACGATGGACTTCGCGGTCGAGGTCGCCGGGCTGCCGGCGCACAC
CGAGCTGCGCAAGCCGGCGTCCAGCGGCTGGGAGTCGGGGGCCTGGGTGCTGGACTTCATCGGTTCCTGGGAGTGGACGA
TCCCCGGCGGCACGAGCGAGATCCAGCGCACGATCATCGGTGAGCGCGGGCTCGGCCTGCCCCGTGAGCCGGTGGTGCCG
GCATGA

Upstream 100 bases:

>100_bases
GCCTGTCCGGTCCGTTCGCCGGGCCCGCGGGAGCCGCGGGAGCCGCCGCCCGTGCCGGCACGGGCGGCGGCACGGGTTCC
GGTGAGGAGGGGCAGCCGCG

Downstream 100 bases:

>100_bases
GCGCCGGTCCGGGCACCGCGGGCGCGCCGCAGGACGCGAGCACGCCGCAGGATGTGGACGACCTGCGCGAGCTGCACCGC
GAGCTGCGTGACGTGGCGCG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MNTSTEDLAEFRAEVRRWCREHVPADWRRAQTVAGDAEFVAFQQAWFQELRTGGYAVPHWPAEWGGGMPAAQQVVLYQEL
AAHDAPRLVLGFVSIHHAASTLLAAGTDEQRARHLPAILDGEIWVQGFSEPEAGSDLAGLRTTARREGDGFVVDGQKLWA
SGAAHADWCLLLARTDPAAPKRRGISYFLMDMRSPGLDVRPVRNAAGESHFCEIFLNGVVIPAENLVGPVNQGWQVAQAT
LSAERGMTMLELAERLGNAGFRWLVEACRGPAPGGGRLVDDPRVQDRLAELETEIAGLRALCLGLVERHEAGTAGPADAS
VVKLYYSELLQRTMDFAVEVAGLPAHTELRKPASSGWESGAWVLDFIGSWEWTIPGGTSEIQRTIIGERGLGLPREPVVP
A

Sequences:

>Translated_401_residues
MNTSTEDLAEFRAEVRRWCREHVPADWRRAQTVAGDAEFVAFQQAWFQELRTGGYAVPHWPAEWGGGMPAAQQVVLYQEL
AAHDAPRLVLGFVSIHHAASTLLAAGTDEQRARHLPAILDGEIWVQGFSEPEAGSDLAGLRTTARREGDGFVVDGQKLWA
SGAAHADWCLLLARTDPAAPKRRGISYFLMDMRSPGLDVRPVRNAAGESHFCEIFLNGVVIPAENLVGPVNQGWQVAQAT
LSAERGMTMLELAERLGNAGFRWLVEACRGPAPGGGRLVDDPRVQDRLAELETEIAGLRALCLGLVERHEAGTAGPADAS
VVKLYYSELLQRTMDFAVEVAGLPAHTELRKPASSGWESGAWVLDFIGSWEWTIPGGTSEIQRTIIGERGLGLPREPVVP
A
>Mature_401_residues
MNTSTEDLAEFRAEVRRWCREHVPADWRRAQTVAGDAEFVAFQQAWFQELRTGGYAVPHWPAEWGGGMPAAQQVVLYQEL
AAHDAPRLVLGFVSIHHAASTLLAAGTDEQRARHLPAILDGEIWVQGFSEPEAGSDLAGLRTTARREGDGFVVDGQKLWA
SGAAHADWCLLLARTDPAAPKRRGISYFLMDMRSPGLDVRPVRNAAGESHFCEIFLNGVVIPAENLVGPVNQGWQVAQAT
LSAERGMTMLELAERLGNAGFRWLVEACRGPAPGGGRLVDDPRVQDRLAELETEIAGLRALCLGLVERHEAGTAGPADAS
VVKLYYSELLQRTMDFAVEVAGLPAHTELRKPASSGWESGAWVLDFIGSWEWTIPGGTSEIQRTIIGERGLGLPREPVVP
A

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=354, Percent_Identity=27.9661016949153, Blast_Score=125, Evalue=8e-29,
Organism=Homo sapiens, GI226958412, Length=397, Percent_Identity=25.1889168765743, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI226958414, Length=355, Percent_Identity=25.6338028169014, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI187960098, Length=397, Percent_Identity=24.9370277078086, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI4557231, Length=397, Percent_Identity=24.9370277078086, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI4501857, Length=343, Percent_Identity=26.530612244898, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI76496475, Length=198, Percent_Identity=31.3131313131313, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI4557235, Length=198, Percent_Identity=31.3131313131313, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI211971008, Length=254, Percent_Identity=26.3779527559055, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI48976061, Length=254, Percent_Identity=26.3779527559055, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI7656849, Length=185, Percent_Identity=27.027027027027, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI21361497, Length=209, Percent_Identity=26.7942583732057, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI4557233, Length=331, Percent_Identity=25.9818731117825, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI38505218, Length=254, Percent_Identity=26.7716535433071, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI87081958, Length=351, Percent_Identity=21.0826210826211, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1786223, Length=279, Percent_Identity=23.2974910394265, Blast_Score=74, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17506239, Length=341, Percent_Identity=27.2727272727273, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17508101, Length=285, Percent_Identity=28.7719298245614, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17570075, Length=398, Percent_Identity=25.8793969849246, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI17538396, Length=340, Percent_Identity=26.4705882352941, Blast_Score=104, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI17569725, Length=349, Percent_Identity=24.6418338108883, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17534899, Length=344, Percent_Identity=25.5813953488372, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI32563615, Length=244, Percent_Identity=28.2786885245902, Blast_Score=98, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI71990804, Length=275, Percent_Identity=25.4545454545455, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17551932, Length=306, Percent_Identity=26.1437908496732, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71982178, Length=230, Percent_Identity=27.8260869565217, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71985184, Length=212, Percent_Identity=29.2452830188679, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71985192, Length=212, Percent_Identity=29.2452830188679, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17533517, Length=253, Percent_Identity=24.901185770751, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17505929, Length=212, Percent_Identity=25, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24666513, Length=275, Percent_Identity=29.0909090909091, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI21355753, Length=302, Percent_Identity=27.4834437086093, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24660351, Length=395, Percent_Identity=24.8101265822785, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24646207, Length=330, Percent_Identity=26.0606060606061, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281363737, Length=303, Percent_Identity=25.0825082508251, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI21356377, Length=336, Percent_Identity=25, Blast_Score=79, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43636; Mature: 43636

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSTEDLAEFRAEVRRWCREHVPADWRRAQTVAGDAEFVAFQQAWFQELRTGGYAVPHW
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
PAEWGGGMPAAQQVVLYQELAAHDAPRLVLGFVSIHHAASTLLAAGTDEQRARHLPAILD
CHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEC
GEIWVQGFSEPEAGSDLAGLRTTARREGDGFVVDGQKLWASGAAHADWCLLLARTDPAAP
CCEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECHHHHHCCCCCCCEEEEEECCCCCCH
KRRGISYFLMDMRSPGLDVRPVRNAAGESHFCEIFLNGVVIPAENLVGPVNQGWQVAQAT
HHCCCEEEEEECCCCCCCCCCCHHHCCCHHEEHHEECCEEEEHHHHCCCCCCCHHHHHHH
LSAERGMTMLELAERLGNAGFRWLVEACRGPAPGGGRLVDDPRVQDRLAELETEIAGLRA
HHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LCLGLVERHEAGTAGPADASVVKLYYSELLQRTMDFAVEVAGLPAHTELRKPASSGWESG
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCC
AWVLDFIGSWEWTIPGGTSEIQRTIIGERGLGLPREPVVPA
CCCEEHHCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNTSTEDLAEFRAEVRRWCREHVPADWRRAQTVAGDAEFVAFQQAWFQELRTGGYAVPHW
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
PAEWGGGMPAAQQVVLYQELAAHDAPRLVLGFVSIHHAASTLLAAGTDEQRARHLPAILD
CHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEC
GEIWVQGFSEPEAGSDLAGLRTTARREGDGFVVDGQKLWASGAAHADWCLLLARTDPAAP
CCEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECHHHHHCCCCCCCEEEEEECCCCCCH
KRRGISYFLMDMRSPGLDVRPVRNAAGESHFCEIFLNGVVIPAENLVGPVNQGWQVAQAT
HHCCCEEEEEECCCCCCCCCCCHHHCCCHHEEHHEECCEEEEHHHHCCCCCCCHHHHHHH
LSAERGMTMLELAERLGNAGFRWLVEACRGPAPGGGRLVDDPRVQDRLAELETEIAGLRA
HHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LCLGLVERHEAGTAGPADASVVKLYYSELLQRTMDFAVEVAGLPAHTELRKPASSGWESG
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCC
AWVLDFIGSWEWTIPGGTSEIQRTIIGERGLGLPREPVVPA
CCCEEHHCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]