| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318565
Identifier: 158318565
GI number: 158318565
Start: 8327623
End: 8327988
Strand: Reverse
Name: 158318565
Synonym: Franean1_6833
Alternate gene names: NA
Gene position: 8327988-8327623 (Counterclockwise)
Preceding gene: 158318569
Following gene: 158318564
Centisome position: 92.72
GC content: 73.77
Gene sequence:
>366_bases TTGCTCGTCGAACACTGCCCGGCCTGCGGGTCCGACTCCTTCCCGCCGTACGGGGCCTGCCGGGTGTGCCGGAGCCGTCC GGTCGAGTTCGTGGAGATCACCGAGCGCGGCCGGGTGTACAGCTTCACGGTCAACCACCAGCGCTGGATGCCCGGTCTCG AGGTGCCCTACGCGATCGTCCTCGTCGAGTTCCCGGGCCATCCGGGCGTGCGGGTGGCCGGCCGGCTGCGCGGCTGCCCC CCGGAGGCCGTGGAGATCGGGATGGCGGTCGAGGTCGGCTTCGAGCCGGGGCCCGGCGACTTCGCCGTCCCGAGCTTCGT CGCCGTCGACCGCGCCTCCGAGAGCGGTGCCGGGGCGACCGCGTGA
Upstream 100 bases:
>100_bases TAGGGAAGCAAGGGGGAGAGGCTTGACCGCGATCGTGGGTATACCCCCGGCCGTGACCGAGGAGACCGAGCCGTTCTGGA CGGCGGCTCGCGAAGGCCGG
Downstream 100 bases:
>100_bases CGGGCACCGAGCACTTCGAGAAGCGGGTCGTGCTCTCCGGCGTCGGCCAGTCGGCCGTCGGGCGGCGCATCGACCGCTCC GGGTTCCAGCTGACCCTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MLVEHCPACGSDSFPPYGACRVCRSRPVEFVEITERGRVYSFTVNHQRWMPGLEVPYAIVLVEFPGHPGVRVAGRLRGCP PEAVEIGMAVEVGFEPGPGDFAVPSFVAVDRASESGAGATA
Sequences:
>Translated_121_residues MLVEHCPACGSDSFPPYGACRVCRSRPVEFVEITERGRVYSFTVNHQRWMPGLEVPYAIVLVEFPGHPGVRVAGRLRGCP PEAVEIGMAVEVGFEPGPGDFAVPSFVAVDRASESGAGATA >Mature_121_residues MLVEHCPACGSDSFPPYGACRVCRSRPVEFVEITERGRVYSFTVNHQRWMPGLEVPYAIVLVEFPGHPGVRVAGRLRGCP PEAVEIGMAVEVGFEPGPGDFAVPSFVAVDRASESGAGATA
Specific function: Unknown
COG id: COG1545
COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12919; Mature: 12919
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVEHCPACGSDSFPPYGACRVCRSRPVEFVEITERGRVYSFTVNHQRWMPGLEVPYAIV CCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEEE LVEFPGHPGVRVAGRLRGCPPEAVEIGMAVEVGFEPGPGDFAVPSFVAVDRASESGAGAT EEECCCCCCEEEEEECCCCCHHHEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCC A C >Mature Secondary Structure MLVEHCPACGSDSFPPYGACRVCRSRPVEFVEITERGRVYSFTVNHQRWMPGLEVPYAIV CCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEEE LVEFPGHPGVRVAGRLRGCPPEAVEIGMAVEVGFEPGPGDFAVPSFVAVDRASESGAGAT EEECCCCCCEEEEEECCCCCHHHEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA