| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318561
Identifier: 158318561
GI number: 158318561
Start: 8323812
End: 8324843
Strand: Direct
Name: 158318561
Synonym: Franean1_6829
Alternate gene names: NA
Gene position: 8323812-8324843 (Clockwise)
Preceding gene: 158318560
Following gene: 158318566
Centisome position: 92.67
GC content: 75.19
Gene sequence:
>1032_bases ATGACGATCGGATCGGTCGCCGAGGGGCCGTACTTCGACGAGCTGGCCGTCGGGCAGCGGTTCCGCTCCGCGCCGGGGGT CACGCTGACCGCCGGCCTCGCGGACGTCCACCGCTCGATCGTCGGCGGCCGGCTCGCCCTGGCCCTCGACACCGCGCTGT GCGCCGAGGTGACCGGCGCCGCGGCGCTCGCCCCGCCGAACGTCGTCTGGGACGTCGCCATCGGGCAGTCCACGGTGGTC ACCCATCACGTGAAGGCCAACCTGTTCTACCGCGGGCTGGTCTTCCGCCGGGCGCCCGAGATCGGGGACACGCTGCGGAC GTCCACCGAGGTCGTCGCGCTGCGGCAGAACAACGTCCGGGCCGGGCGCCGGCCGACCGGGCTGGCGGTGCTGCGCATCA CCACCGTCGACCAGCGGGACCGGCCCGTCCTGGACTTCTGGCGGTGCGCGATGCTCCCGCTGCGCGACCCCGACCGGGCC ACCGGGCACCGGGACGACATCGAGGCCATCGGGACCGTCGAGACGGCCGGGACGGCGGAGCTCGGGGCCGTCGTCGAGGG CTGGGACCTCGAGCGCTTCGCGGCCGCGACCGAGGGCGCGGGCTTCGCCGATCTCAAGGTCGGGCAGAGCTGGCGGGTCG GCGGCGGCGACGTCGTGTCCAGCGCGCCCGAGCTGGCCCGGCTCACCCTGAACATCGCCCAGGTGCACCACGACACCCGG GCCGGCGGCGGGCGGCGGCTGGTCTACGGCGGCCACACCATCGGCCTCGCGTTCGCGCAGGTCACGCGGGCGCTGCCACG GCTGGTCACCGTCGCGGGCTGGCACGGGTGCGACCATGTCGGCCCGGTGTACGAGGGCGACACCCTGCGCAGCGACATCA CGGTGGAGGACCTCACACCGCTCGCCACGGGTGGAGGCCTCGTCAGCCTGCGTTCGCGGGTACGCGCCGACGGCGGACCC GGCGACGGCGAGCCCGGCCAGGAACCCGACCGGGACGTCCTCGACTGGCGCTTCGTCGCGGTCCTGCCCTGA
Upstream 100 bases:
>100_bases CCGCGCCCGTCCTGGGCGAGATACTCGGCCTGACGGATGCCGAGATCGGCCGGCTGATCGACACCGGCGTGATCGCGAGT GAGACGACGGGACGGACAGG
Downstream 100 bases:
>100_bases TCGACGCGTCGGTGCGGTCATGAGGGCCCGCCGGGCGCAGCGGCGGCTGTCTCGACCGAGCAGACATTCAGAGCGATCGC GCAGTAGGTGCCACGGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Dehydratase; MaoC Domain Protein Dehydratase; MaoC-Like Dehydratase; Acyl Dehydratase-Like Protein; MaoC Domain-Containing Protein Dehydratase; MaoC Domain Protein; Dehydrogenase; P40 Protein; MaoC Domain-Containing Protein; MaoC Like Domain Protein; Thiol Ester Dehydrase/Isomerase; MaoC-Like Domain-Containing Protein
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MTIGSVAEGPYFDELAVGQRFRSAPGVTLTAGLADVHRSIVGGRLALALDTALCAEVTGAAALAPPNVVWDVAIGQSTVV THHVKANLFYRGLVFRRAPEIGDTLRTSTEVVALRQNNVRAGRRPTGLAVLRITTVDQRDRPVLDFWRCAMLPLRDPDRA TGHRDDIEAIGTVETAGTAELGAVVEGWDLERFAAATEGAGFADLKVGQSWRVGGGDVVSSAPELARLTLNIAQVHHDTR AGGGRRLVYGGHTIGLAFAQVTRALPRLVTVAGWHGCDHVGPVYEGDTLRSDITVEDLTPLATGGGLVSLRSRVRADGGP GDGEPGQEPDRDVLDWRFVAVLP
Sequences:
>Translated_343_residues MTIGSVAEGPYFDELAVGQRFRSAPGVTLTAGLADVHRSIVGGRLALALDTALCAEVTGAAALAPPNVVWDVAIGQSTVV THHVKANLFYRGLVFRRAPEIGDTLRTSTEVVALRQNNVRAGRRPTGLAVLRITTVDQRDRPVLDFWRCAMLPLRDPDRA TGHRDDIEAIGTVETAGTAELGAVVEGWDLERFAAATEGAGFADLKVGQSWRVGGGDVVSSAPELARLTLNIAQVHHDTR AGGGRRLVYGGHTIGLAFAQVTRALPRLVTVAGWHGCDHVGPVYEGDTLRSDITVEDLTPLATGGGLVSLRSRVRADGGP GDGEPGQEPDRDVLDWRFVAVLP >Mature_342_residues TIGSVAEGPYFDELAVGQRFRSAPGVTLTAGLADVHRSIVGGRLALALDTALCAEVTGAAALAPPNVVWDVAIGQSTVVT HHVKANLFYRGLVFRRAPEIGDTLRTSTEVVALRQNNVRAGRRPTGLAVLRITTVDQRDRPVLDFWRCAMLPLRDPDRAT GHRDDIEAIGTVETAGTAELGAVVEGWDLERFAAATEGAGFADLKVGQSWRVGGGDVVSSAPELARLTLNIAQVHHDTRA GGGRRLVYGGHTIGLAFAQVTRALPRLVTVAGWHGCDHVGPVYEGDTLRSDITVEDLTPLATGGGLVSLRSRVRADGGPG DGEPGQEPDRDVLDWRFVAVLP
Specific function: Unknown
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36363; Mature: 36231
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIGSVAEGPYFDELAVGQRFRSAPGVTLTAGLADVHRSIVGGRLALALDTALCAEVTGA CCCCCCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCEEEEHHHHHHHHHHCCC AALAPPNVVWDVAIGQSTVVTHHVKANLFYRGLVFRRAPEIGDTLRTSTEVVALRQNNVR CCCCCCCEEEEEECCCCEEEEEEHHHHHEEEHHHHHCCCCCCHHHHCCCEEEEEECCCCC AGRRPTGLAVLRITTVDQRDRPVLDFWRCAMLPLRDPDRATGHRDDIEAIGTVETAGTAE CCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCHH LGAVVEGWDLERFAAATEGAGFADLKVGQSWRVGGGDVVSSAPELARLTLNIAQVHHDTR HCCEEECCCHHHHHHHCCCCCEEEEECCCCEECCCCHHHCCCHHHHHHHHHHHHHHHHCC AGGGRRLVYGGHTIGLAFAQVTRALPRLVTVAGWHGCDHVGPVYEGDTLRSDITVEDLTP CCCCCEEEECCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCC LATGGGLVSLRSRVRADGGPGDGEPGQEPDRDVLDWRFVAVLP CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure TIGSVAEGPYFDELAVGQRFRSAPGVTLTAGLADVHRSIVGGRLALALDTALCAEVTGA CCCCCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCEEEEHHHHHHHHHHCCC AALAPPNVVWDVAIGQSTVVTHHVKANLFYRGLVFRRAPEIGDTLRTSTEVVALRQNNVR CCCCCCCEEEEEECCCCEEEEEEHHHHHEEEHHHHHCCCCCCHHHHCCCEEEEEECCCCC AGRRPTGLAVLRITTVDQRDRPVLDFWRCAMLPLRDPDRATGHRDDIEAIGTVETAGTAE CCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCHH LGAVVEGWDLERFAAATEGAGFADLKVGQSWRVGGGDVVSSAPELARLTLNIAQVHHDTR HCCEEECCCHHHHHHHCCCCCEEEEECCCCEECCCCHHHCCCHHHHHHHHHHHHHHHHCC AGGGRRLVYGGHTIGLAFAQVTRALPRLVTVAGWHGCDHVGPVYEGDTLRSDITVEDLTP CCCCCEEEECCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCC LATGGGLVSLRSRVRADGGPGDGEPGQEPDRDVLDWRFVAVLP CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA