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The map label for this gene is frc [H]

Identifier: 158318560

GI number: 158318560

Start: 8322571

End: 8323815

Strand: Direct

Name: frc [H]

Synonym: Franean1_6828

Alternate gene names: 158318560

Gene position: 8322571-8323815 (Clockwise)

Preceding gene: 158318559

Following gene: 158318561

Centisome position: 92.66

GC content: 72.13

Gene sequence:

>1245_bases
ATGACTCGGCGGCCGCTTGCGGGACTGCAGGTCGTGGAGTGTGCGAGCTTCGTCGCCGGGCCCACCGGCGGGATGACGCT
CGCGCAGCTCGGGGCCGACGTGATCCGGGTCGACCCGATCGGCGGCGGCAGCGACTACCAGCGCTGGCCGGTGGCACCCA
CCGGCGAGAGCTACTACTGGACGTCCCTCAACAAGGGGAAGCGGTCCGTCGCGGTCGACCTGCGTTCCGGCGCAGGCAAG
GAGCTGGTCACAGCTTTGATCACCGCGCCGGGGCCGGATCGCGGTGTCCTCGTCGACAACGTCGTCGGGCGGCGCTGGAT
GTCCTACGACGCCCTGACCGCCCGCCGGCCGGACCTGATCCACATTCGCGTCCAGGGATATCCGGACGGGCGGCCCGCCG
TCGACTACACGGTCAACGCCGAGGTCGGCCTGCCGGGTATCACCGGGCGGGAGGAGGGCGGCGCTCCGGTCAACCACGTG
CTGCCGGCCTGGGATTTCATCACCGGGCTGACCGTGTCGACGGCGGTTCTCGCCGCGTTGCGCGACCGCGACCGCACCGG
GGCCGGCGCGTTCGTCGAGCTGGCGCTGGCAGACGTCGCGCTCAGCGGTGTGGCGAATCTCGGCTGGCTGTCGGAGGCCG
CGGCCCGCGGGACCGAGCGGCCCAGGCACGGCAACCACGTCTACGGCAGTTTCGGCGTCGATTTCACCTGCAGCGACGGC
AACCGGGTGATGGTGGTGGCGCTCACCGAGGGCCAGTGGGCGGCGCTGTGCTCGGTGACCAAGACCGGCGAGGTGTTCGC
CGCCCTCGAGACGGCACTGGACGCCGACCTGGCCCACGAGGCCGACCGGTACCGGCTGCGCGAGACCATCGCCGCGGTGC
TGCGTCCTTGGTTCGCCGCCCGCGACTACCAGCAGGTCAGCAACGAGCTCGACGCCGCCCGCGTGCTGTGGGGCCGGTAC
CGGGGCATGTCCGACGTCGTCGCAGCGCACGCCGCGGACCCGATTCCGCTGCTCGCGGAGGTCCAGTTGCCGGCTCACGG
GCCGTCCTCGGGAACCGTCACGGCGATCACGGCGCGCTCGCCGATGCGCTGGGACGGCGAGTACGGCGCGCCCGGTGAGG
CACCGCGCCTCGGCCAGGACACCGCGCCCGTCCTGGGCGAGATACTCGGCCTGACGGATGCCGAGATCGGCCGGCTGATC
GACACCGGCGTGATCGCGAGTGAGACGACGGGACGGACAGGATGA

Upstream 100 bases:

>100_bases
CATGGGCACGCTTCGGTGGCGGGCGCTGTCTCGCCCCGGAACTCGGGCGGTGCACCCTGGTGTTCGGACGGCTCACCCCG
GCCCTTATACGGGCGGCGTC

Downstream 100 bases:

>100_bases
CGATCGGATCGGTCGCCGAGGGGCCGTACTTCGACGAGCTGGCCGTCGGGCAGCGGTTCCGCTCCGCGCCGGGGGTCACG
CTGACCGCCGGCCTCGCGGA

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MTRRPLAGLQVVECASFVAGPTGGMTLAQLGADVIRVDPIGGGSDYQRWPVAPTGESYYWTSLNKGKRSVAVDLRSGAGK
ELVTALITAPGPDRGVLVDNVVGRRWMSYDALTARRPDLIHIRVQGYPDGRPAVDYTVNAEVGLPGITGREEGGAPVNHV
LPAWDFITGLTVSTAVLAALRDRDRTGAGAFVELALADVALSGVANLGWLSEAAARGTERPRHGNHVYGSFGVDFTCSDG
NRVMVVALTEGQWAALCSVTKTGEVFAALETALDADLAHEADRYRLRETIAAVLRPWFAARDYQQVSNELDAARVLWGRY
RGMSDVVAAHAADPIPLLAEVQLPAHGPSSGTVTAITARSPMRWDGEYGAPGEAPRLGQDTAPVLGEILGLTDAEIGRLI
DTGVIASETTGRTG

Sequences:

>Translated_414_residues
MTRRPLAGLQVVECASFVAGPTGGMTLAQLGADVIRVDPIGGGSDYQRWPVAPTGESYYWTSLNKGKRSVAVDLRSGAGK
ELVTALITAPGPDRGVLVDNVVGRRWMSYDALTARRPDLIHIRVQGYPDGRPAVDYTVNAEVGLPGITGREEGGAPVNHV
LPAWDFITGLTVSTAVLAALRDRDRTGAGAFVELALADVALSGVANLGWLSEAAARGTERPRHGNHVYGSFGVDFTCSDG
NRVMVVALTEGQWAALCSVTKTGEVFAALETALDADLAHEADRYRLRETIAAVLRPWFAARDYQQVSNELDAARVLWGRY
RGMSDVVAAHAADPIPLLAEVQLPAHGPSSGTVTAITARSPMRWDGEYGAPGEAPRLGQDTAPVLGEILGLTDAEIGRLI
DTGVIASETTGRTG
>Mature_413_residues
TRRPLAGLQVVECASFVAGPTGGMTLAQLGADVIRVDPIGGGSDYQRWPVAPTGESYYWTSLNKGKRSVAVDLRSGAGKE
LVTALITAPGPDRGVLVDNVVGRRWMSYDALTARRPDLIHIRVQGYPDGRPAVDYTVNAEVGLPGITGREEGGAPVNHVL
PAWDFITGLTVSTAVLAALRDRDRTGAGAFVELALADVALSGVANLGWLSEAAARGTERPRHGNHVYGSFGVDFTCSDGN
RVMVVALTEGQWAALCSVTKTGEVFAALETALDADLAHEADRYRLRETIAAVLRPWFAARDYQQVSNELDAARVLWGRYR
GMSDVVAAHAADPIPLLAEVQLPAHGPSSGTVTAITARSPMRWDGEYGAPGEAPRLGQDTAPVLGEILGLTDAEIGRLID
TGVIASETTGRTG

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=419, Percent_Identity=26.7303102625298, Blast_Score=112, Evalue=7e-25,
Organism=Homo sapiens, GI300863124, Length=440, Percent_Identity=25.6818181818182, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI13376042, Length=431, Percent_Identity=24.8259860788863, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI300863126, Length=417, Percent_Identity=23.7410071942446, Blast_Score=77, Evalue=3e-14,
Organism=Escherichia coli, GI87082093, Length=274, Percent_Identity=26.2773722627737, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI1788717, Length=444, Percent_Identity=24.3243243243243, Blast_Score=72, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24648431, Length=424, Percent_Identity=27.3584905660377, Blast_Score=102, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 43774; Mature: 43643

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRPLAGLQVVECASFVAGPTGGMTLAQLGADVIRVDPIGGGSDYQRWPVAPTGESYYW
CCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCEEE
TSLNKGKRSVAVDLRSGAGKELVTALITAPGPDRGVLVDNVVGRRWMSYDALTARRPDLI
ECCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCHHHCCCCCEE
HIRVQGYPDGRPAVDYTVNAEVGLPGITGREEGGAPVNHVLPAWDFITGLTVSTAVLAAL
EEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHH
RDRDRTGAGAFVELALADVALSGVANLGWLSEAAARGTERPRHGNHVYGSFGVDFTCSDG
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEECCC
NRVMVVALTEGQWAALCSVTKTGEVFAALETALDADLAHEADRYRLRETIAAVLRPWFAA
CEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDYQQVSNELDAARVLWGRYRGMSDVVAAHAADPIPLLAEVQLPAHGPSSGTVTAITARS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEECC
PMRWDGEYGAPGEAPRLGQDTAPVLGEILGLTDAEIGRLIDTGVIASETTGRTG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCCCC
>Mature Secondary Structure 
TRRPLAGLQVVECASFVAGPTGGMTLAQLGADVIRVDPIGGGSDYQRWPVAPTGESYYW
CCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCEEE
TSLNKGKRSVAVDLRSGAGKELVTALITAPGPDRGVLVDNVVGRRWMSYDALTARRPDLI
ECCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCHHHCCCCCEE
HIRVQGYPDGRPAVDYTVNAEVGLPGITGREEGGAPVNHVLPAWDFITGLTVSTAVLAAL
EEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHH
RDRDRTGAGAFVELALADVALSGVANLGWLSEAAARGTERPRHGNHVYGSFGVDFTCSDG
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEECCC
NRVMVVALTEGQWAALCSVTKTGEVFAALETALDADLAHEADRYRLRETIAAVLRPWFAA
CEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDYQQVSNELDAARVLWGRYRGMSDVVAAHAADPIPLLAEVQLPAHGPSSGTVTAITARS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEECC
PMRWDGEYGAPGEAPRLGQDTAPVLGEILGLTDAEIGRLIDTGVIASETTGRTG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA