Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318530

Identifier: 158318530

GI number: 158318530

Start: 8288606

End: 8289751

Strand: Direct

Name: 158318530

Synonym: Franean1_6798

Alternate gene names: NA

Gene position: 8288606-8289751 (Clockwise)

Preceding gene: 158318523

Following gene: 158318533

Centisome position: 92.28

GC content: 71.73

Gene sequence:

>1146_bases
ATGACCAGTGAACGCTTAGTGGATTCGGCGCCGCCTCTGCCCGGCCCGCCGGTCGCCGGACAGGGTTGGTGGGTGGCGGT
CGCGGGGCAACGGCCGCTGCCGGGACCCGGAGGACACCGAGGTAGTGGCGCGCGGCATGGACGCGGAAGGCCCGGATCCC
CGGGCGCGGAGGCTATACACAGATCGTCGACAGCCCGGTGGTGCGCTCGGGCCTCGCAACTCCCGTCAGGTCCCATCAGG
AAAGGCCGACGAGCGTGTCTCAGCCCACTGTCGTCCTCGTCCACGGCGCCTTCGCCGACGCGTCCAGCTTCGCCAGGGTT
GTTCCCGAACTGCTCGCCGACGGGGTCAGGGTGCTGGCACCCGCCGTCGGCGAACCGCTCACTCCTCGGCGACGCCGGGT
ACATCGGGTCGGTGCTCGCGGCCGTCGACGGTCCCTTTGTGCTCGTCGGCCACTCGTATGGCTGCGCGGTGAGCCAGCAT
GATCGAGTGACGGATCGAGATCGTCAGCTGTCGGTTCGCACGGACCCGTGGACCACGGGCTCAACACTGGCTCCAGCCAT
GCGACGCGGCCACACAACACGTGGGCCGCACCGTGGGGACATGTCAGCATCACAGGCCCAACGGATTCGTCCCGAGCGTC
CGCGCCACGACCCGCGTCCTGCCCACGGACGAGGTCCGGTCATCGTCCGGTCCGACCCGCCCGCGAAGGTCGACGGGTCG
CCGCAGCCGACAGAGGCGGTCGCCGCACCGGCCACCCCCGTCGTCGGCTGGCGGCGGCTGTGGGCCGCGGCGCTGCTCGC
AGGGTTCGTGACCGTCGCGGCGATCCAGCCGCCCCGCGAGGCACGACCACCGACACAACCGCCGTGGGTGGACGTCGTCA
GCGCCGGCGCCCTCGTCCTCCTGGCAGCCGCGTTCGTCGCCCTGCTGGCCGACCACCGATGGGGCTTCACCCTCGCCGTG
TACGGCAGCGCCGGCTTCCTCCTCGTCTCAGCTGTGTGCCCGGCGTGGAACCACCACCAGGCGGGAACGTCGTGGATCGG
TCAGACCGGAGTCGCCACAGCGATGCTCCTCGGCTCGCTGGTCGGGCGGGAGCGGACCGGCTCGGCCGGCCGAGCCGGTC
CGCTCAGATCGGCAGGGATCCGGTGA

Upstream 100 bases:

>100_bases
ATGGTGAGACCTCGCCTTCAGCGCCATGGCTGGACAAACCAACAACAGCCGTGCCCGACCGCATGCACCTGCCTCTGATC
ACACTAGGTCGACTCTCTTG

Downstream 100 bases:

>100_bases
ACGGCGGCCGGGCGCCTGCGGTCAGGTGCAGCGGTCCGCCAGCATCCGGGCGGTGGTCCTCACCTCCGTCAGCAGAGCGG
GGTCGTAGGTCCCGGAATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MTSERLVDSAPPLPGPPVAGQGWWVAVAGQRPLPGPGGHRGSGARHGRGRPGSPGAEAIHRSSTARWCARASQLPSGPIR
KGRRACLSPLSSSSTAPSPTRPASPGLFPNCSPTGSGCWHPPSANRSLLGDAGYIGSVLAAVDGPFVLVGHSYGCAVSQH
DRVTDRDRQLSVRTDPWTTGSTLAPAMRRGHTTRGPHRGDMSASQAQRIRPERPRHDPRPAHGRGPVIVRSDPPAKVDGS
PQPTEAVAAPATPVVGWRRLWAAALLAGFVTVAAIQPPREARPPTQPPWVDVVSAGALVLLAAAFVALLADHRWGFTLAV
YGSAGFLLVSAVCPAWNHHQAGTSWIGQTGVATAMLLGSLVGRERTGSAGRAGPLRSAGIR

Sequences:

>Translated_381_residues
MTSERLVDSAPPLPGPPVAGQGWWVAVAGQRPLPGPGGHRGSGARHGRGRPGSPGAEAIHRSSTARWCARASQLPSGPIR
KGRRACLSPLSSSSTAPSPTRPASPGLFPNCSPTGSGCWHPPSANRSLLGDAGYIGSVLAAVDGPFVLVGHSYGCAVSQH
DRVTDRDRQLSVRTDPWTTGSTLAPAMRRGHTTRGPHRGDMSASQAQRIRPERPRHDPRPAHGRGPVIVRSDPPAKVDGS
PQPTEAVAAPATPVVGWRRLWAAALLAGFVTVAAIQPPREARPPTQPPWVDVVSAGALVLLAAAFVALLADHRWGFTLAV
YGSAGFLLVSAVCPAWNHHQAGTSWIGQTGVATAMLLGSLVGRERTGSAGRAGPLRSAGIR
>Mature_380_residues
TSERLVDSAPPLPGPPVAGQGWWVAVAGQRPLPGPGGHRGSGARHGRGRPGSPGAEAIHRSSTARWCARASQLPSGPIRK
GRRACLSPLSSSSTAPSPTRPASPGLFPNCSPTGSGCWHPPSANRSLLGDAGYIGSVLAAVDGPFVLVGHSYGCAVSQHD
RVTDRDRQLSVRTDPWTTGSTLAPAMRRGHTTRGPHRGDMSASQAQRIRPERPRHDPRPAHGRGPVIVRSDPPAKVDGSP
QPTEAVAAPATPVVGWRRLWAAALLAGFVTVAAIQPPREARPPTQPPWVDVVSAGALVLLAAAFVALLADHRWGFTLAVY
GSAGFLLVSAVCPAWNHHQAGTSWIGQTGVATAMLLGSLVGRERTGSAGRAGPLRSAGIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39577; Mature: 39446

Theoretical pI: Translated: 12.05; Mature: 12.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSERLVDSAPPLPGPPVAGQGWWVAVAGQRPLPGPGGHRGSGARHGRGRPGSPGAEAIH
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
RSSTARWCARASQLPSGPIRKGRRACLSPLSSSSTAPSPTRPASPGLFPNCSPTGSGCWH
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPSANRSLLGDAGYIGSVLAAVDGPFVLVGHSYGCAVSQHDRVTDRDRQLSVRTDPWTTG
CCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCC
STLAPAMRRGHTTRGPHRGDMSASQAQRIRPERPRHDPRPAHGRGPVIVRSDPPAKVDGS
CHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
PQPTEAVAAPATPVVGWRRLWAAALLAGFVTVAAIQPPREARPPTQPPWVDVVSAGALVL
CCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHH
LAAAFVALLADHRWGFTLAVYGSAGFLLVSAVCPAWNHHQAGTSWIGQTGVATAMLLGSL
HHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VGRERTGSAGRAGPLRSAGIR
HCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure 
TSERLVDSAPPLPGPPVAGQGWWVAVAGQRPLPGPGGHRGSGARHGRGRPGSPGAEAIH
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
RSSTARWCARASQLPSGPIRKGRRACLSPLSSSSTAPSPTRPASPGLFPNCSPTGSGCWH
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPSANRSLLGDAGYIGSVLAAVDGPFVLVGHSYGCAVSQHDRVTDRDRQLSVRTDPWTTG
CCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCC
STLAPAMRRGHTTRGPHRGDMSASQAQRIRPERPRHDPRPAHGRGPVIVRSDPPAKVDGS
CHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
PQPTEAVAAPATPVVGWRRLWAAALLAGFVTVAAIQPPREARPPTQPPWVDVVSAGALVL
CCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHH
LAAAFVALLADHRWGFTLAVYGSAGFLLVSAVCPAWNHHQAGTSWIGQTGVATAMLLGSL
HHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VGRERTGSAGRAGPLRSAGIR
HCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA