| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318507
Identifier: 158318507
GI number: 158318507
Start: 8246955
End: 8247359
Strand: Reverse
Name: 158318507
Synonym: Franean1_6775
Alternate gene names: NA
Gene position: 8247359-8246955 (Counterclockwise)
Preceding gene: 158318509
Following gene: 158318503
Centisome position: 91.82
GC content: 64.44
Gene sequence:
>405_bases ATGTGCCGAACTACAAGTTGGCGCGACGGGGGTCCGCCTCTTTCGTTGCCAGCGCCGTGTCCCTCCCCGCCCTCGATGCG TGAGGCGTACGCCAACACCGGGAGCGAGGTCCGACGGGCCTCGGGGGTGGCCGGCTCACTCGGTGACGTTGAGCTACGCC GGGTGAGCCAGCCGAGCGAGCGGAGGAGAAGCCCGATGCCGGGCTACATACGGCTTGCCGTCAACATCAACACGGAGAGC GCGGCGGCGTTGAAGGAGATCACTCAACGGCGTACCGCGTCTTACACGGAGACGCTCCGCAGAGCCGTCTCACTTCTCAA GCTGATCGAGGACGAGACCCAGAAGGGTCACAATGTCCAAGTCAATGAGGGCAAGCGCGTTCGCAACATCGTGCTCTCGC CGTGA
Upstream 100 bases:
>100_bases GGCACCATGACAGGCTAGGAGTGCTCGACGTGCAGGTCGAGAGTGCCAACTGGCGCGCTCGACGCCGTCTGGCGCGTGGT CGGCTACTTAAGGTTGCGCG
Downstream 100 bases:
>100_bases ACTCTGGTGTCGCCGTGGGGCAGTCGGGTCGAGGCAGCTCCAGGTGGCGCGGCGCACGTGGTCTGGCGCCAGGGCCTGAT CTCCCTCCGAGGCGTCCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MCRTTSWRDGGPPLSLPAPCPSPPSMREAYANTGSEVRRASGVAGSLGDVELRRVSQPSERRRSPMPGYIRLAVNINTES AAALKEITQRRTASYTETLRRAVSLLKLIEDETQKGHNVQVNEGKRVRNIVLSP
Sequences:
>Translated_134_residues MCRTTSWRDGGPPLSLPAPCPSPPSMREAYANTGSEVRRASGVAGSLGDVELRRVSQPSERRRSPMPGYIRLAVNINTES AAALKEITQRRTASYTETLRRAVSLLKLIEDETQKGHNVQVNEGKRVRNIVLSP >Mature_134_residues MCRTTSWRDGGPPLSLPAPCPSPPSMREAYANTGSEVRRASGVAGSLGDVELRRVSQPSERRRSPMPGYIRLAVNINTES AAALKEITQRRTASYTETLRRAVSLLKLIEDETQKGHNVQVNEGKRVRNIVLSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14727; Mature: 14727
Theoretical pI: Translated: 10.84; Mature: 10.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRTTSWRDGGPPLSLPAPCPSPPSMREAYANTGSEVRRASGVAGSLGDVELRRVSQPSE CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHCCCCHH RRRSPMPGYIRLAVNINTESAAALKEITQRRTASYTETLRRAVSLLKLIEDETQKGHNVQ HHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE VNEGKRVRNIVLSP ECCCCCCHHCCCCC >Mature Secondary Structure MCRTTSWRDGGPPLSLPAPCPSPPSMREAYANTGSEVRRASGVAGSLGDVELRRVSQPSE CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHCCCCHH RRRSPMPGYIRLAVNINTESAAALKEITQRRTASYTETLRRAVSLLKLIEDETQKGHNVQ HHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE VNEGKRVRNIVLSP ECCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA