| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318490
Identifier: 158318490
GI number: 158318490
Start: 8220658
End: 8221122
Strand: Reverse
Name: 158318490
Synonym: Franean1_6758
Alternate gene names: NA
Gene position: 8221122-8220658 (Counterclockwise)
Preceding gene: 158318493
Following gene: 158318489
Centisome position: 91.53
GC content: 73.55
Gene sequence:
>465_bases GTGCACTCGCCCACGGAAGCTCCTGGCAGGTTCGCCGGCCGGACGCCCGCCGATGGCCGCCAGCCCGGCCCTGACCCGTC GTCGTCCACCGCCGTGCGGCGCTCTGGTGTCGGGTCGGCGGTGGTGGTCGGGATGGGGAGGGAGCCGGTCACACCGGCCG GTGATGACGCTCCCTCCCCACCCCTCCCGATCCGTGTCCCGCGTACGACCTGGCCGGCGGGGCGCCGCCGGCTGTCCAGC ACAGGGCGCGGCTATTACGTCCGGCCGCTCAGCGGCCCGGCCGGTGCCGCCGAGCAGAAGTGGACCGTGGTCGTGCTCGA CGCCGACGGTGACCCGAGGGAGACCGTCACCGGGTTCTCGTCGCTGGAGGCTGCGGACGCCTACGCCGAGCTCGACCCGG CCATCATCCGCTGGATATCTGTTCCGACCCGGCCCGCGATCCCTGAGCGGATTCCTGGCCTCTGA
Upstream 100 bases:
>100_bases GATGCTTCAGTCTGTACCGACGCTGGTGCGGAGTGTGTCATGGGTTGTGCGCGGCGGGAAACACGCCGGCCACTCTCCCG AACCAGTAGAGGAGCACATC
Downstream 100 bases:
>100_bases GAACGGAGCCGTCATCCCTCCCGGCGGTTCCTCACATGGCTACACCGCCTACCCCGCATATGTCAGGGGGTTGGGTGGGG TGGCCCCCGCTCGCTGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MHSPTEAPGRFAGRTPADGRQPGPDPSSSTAVRRSGVGSAVVVGMGREPVTPAGDDAPSPPLPIRVPRTTWPAGRRRLSS TGRGYYVRPLSGPAGAAEQKWTVVVLDADGDPRETVTGFSSLEAADAYAELDPAIIRWISVPTRPAIPERIPGL
Sequences:
>Translated_154_residues MHSPTEAPGRFAGRTPADGRQPGPDPSSSTAVRRSGVGSAVVVGMGREPVTPAGDDAPSPPLPIRVPRTTWPAGRRRLSS TGRGYYVRPLSGPAGAAEQKWTVVVLDADGDPRETVTGFSSLEAADAYAELDPAIIRWISVPTRPAIPERIPGL >Mature_154_residues MHSPTEAPGRFAGRTPADGRQPGPDPSSSTAVRRSGVGSAVVVGMGREPVTPAGDDAPSPPLPIRVPRTTWPAGRRRLSS TGRGYYVRPLSGPAGAAEQKWTVVVLDADGDPRETVTGFSSLEAADAYAELDPAIIRWISVPTRPAIPERIPGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16129; Mature: 16129
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSPTEAPGRFAGRTPADGRQPGPDPSSSTAVRRSGVGSAVVVGMGREPVTPAGDDAPSP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCC PLPIRVPRTTWPAGRRRLSSTGRGYYVRPLSGPAGAAEQKWTVVVLDADGDPRETVTGFS CCCEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHCCH SLEAADAYAELDPAIIRWISVPTRPAIPERIPGL HHHHHHHHHHCCHHHEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MHSPTEAPGRFAGRTPADGRQPGPDPSSSTAVRRSGVGSAVVVGMGREPVTPAGDDAPSP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCC PLPIRVPRTTWPAGRRRLSSTGRGYYVRPLSGPAGAAEQKWTVVVLDADGDPRETVTGFS CCCEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHCCH SLEAADAYAELDPAIIRWISVPTRPAIPERIPGL HHHHHHHHHHCCHHHEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA