Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318479

Identifier: 158318479

GI number: 158318479

Start: 8205319

End: 8205873

Strand: Direct

Name: 158318479

Synonym: Franean1_6747

Alternate gene names: NA

Gene position: 8205319-8205873 (Clockwise)

Preceding gene: 158318478

Following gene: 158318480

Centisome position: 91.35

GC content: 63.78

Gene sequence:

>555_bases
GTGATCAGAATACTAGTGGTGCCGGCCGACAGCACGAAACCATACCGTCAGGAGGAGATGAACCCAGCGGACCTGCAGGG
GCTCCAAAGGATCGTCGGTGGCTTCATCGAGCCCGTGAACCTCACTCCCGGCGGATCTCTCTACGCCAACGATGAAGGCA
TCATGAAAGGGCTTCCCGTCAACGAGCGGGCCACCGCGCTCGCCGGGTTCCACACCCACCCGTTCACGCCGGGACAGCTC
ATCGTCGGTGATGTCTACGTGACCGGCCCCGTCGACCATCATGGCTTGGACACCGACGTTCCAAACTCGATCATCCGGCT
TCTCTCCGCGCCACAGATCCAGGTTCAGATTCGGGTGAGACCGGACAGCGAAAACCGTTGGGAAGACATCCCCGGGACCT
ATTCCACGCTGGTCGACGCCTACACCGATATCTGCGCAGTCGCGCGCATCGTGACCGTCATCGACCCCGAGCGCCGACCC
GCCATCCGCGCCATCCCCGCCCCCGAGCCCCCCCACCCACACCGACACCGATGCCGTGTGGACCGTGTGGGGTGA

Upstream 100 bases:

>100_bases
CACCGACCGCTCGTCGGCCGCTCAGACGAGCGATTCCCCCGGATCGACACAACGCACTGCTCGTGCTATTTGTCCGCGTT
GCCAGGAAAGGAAACCAGCC

Downstream 100 bases:

>100_bases
GGGCACCGACCCCTACGCCGTCCGGCAAACCCGCCAGCAGGCCCAGGACGTCGTCGACACCGCAACCGCCGAGGGAGACC
CCGGCGTGTACGCCCAGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MIRILVVPADSTKPYRQEEMNPADLQGLQRIVGGFIEPVNLTPGGSLYANDEGIMKGLPVNERATALAGFHTHPFTPGQL
IVGDVYVTGPVDHHGLDTDVPNSIIRLLSAPQIQVQIRVRPDSENRWEDIPGTYSTLVDAYTDICAVARIVTVIDPERRP
AIRAIPAPEPPHPHRHRCRVDRVG

Sequences:

>Translated_184_residues
MIRILVVPADSTKPYRQEEMNPADLQGLQRIVGGFIEPVNLTPGGSLYANDEGIMKGLPVNERATALAGFHTHPFTPGQL
IVGDVYVTGPVDHHGLDTDVPNSIIRLLSAPQIQVQIRVRPDSENRWEDIPGTYSTLVDAYTDICAVARIVTVIDPERRP
AIRAIPAPEPPHPHRHRCRVDRVG
>Mature_184_residues
MIRILVVPADSTKPYRQEEMNPADLQGLQRIVGGFIEPVNLTPGGSLYANDEGIMKGLPVNERATALAGFHTHPFTPGQL
IVGDVYVTGPVDHHGLDTDVPNSIIRLLSAPQIQVQIRVRPDSENRWEDIPGTYSTLVDAYTDICAVARIVTVIDPERRP
AIRAIPAPEPPHPHRHRCRVDRVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20269; Mature: 20269

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRILVVPADSTKPYRQEEMNPADLQGLQRIVGGFIEPVNLTPGGSLYANDEGIMKGLPV
CEEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCEECCCCCEEECCCCCCCCCCC
NERATALAGFHTHPFTPGQLIVGDVYVTGPVDHHGLDTDVPNSIIRLLSAPQIQVQIRVR
CCCHHEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEE
PDSENRWEDIPGTYSTLVDAYTDICAVARIVTVIDPERRPAIRAIPAPEPPHPHRHRCRV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCEE
DRVG
CCCC
>Mature Secondary Structure
MIRILVVPADSTKPYRQEEMNPADLQGLQRIVGGFIEPVNLTPGGSLYANDEGIMKGLPV
CEEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCEECCCCCEEECCCCCCCCCCC
NERATALAGFHTHPFTPGQLIVGDVYVTGPVDHHGLDTDVPNSIIRLLSAPQIQVQIRVR
CCCHHEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEE
PDSENRWEDIPGTYSTLVDAYTDICAVARIVTVIDPERRPAIRAIPAPEPPHPHRHRCRV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCEE
DRVG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA