Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318457

Identifier: 158318457

GI number: 158318457

Start: 8177934

End: 8178617

Strand: Direct

Name: 158318457

Synonym: Franean1_6725

Alternate gene names: NA

Gene position: 8177934-8178617 (Clockwise)

Preceding gene: 158318456

Following gene: 158318458

Centisome position: 91.05

GC content: 72.81

Gene sequence:

>684_bases
ATGACGGGACGAGGCCGGTCCCTGCGCCGACACACGCGCATGGTCGTACACACCGCGGGCACCGCGCTGCGCCGCCTGCT
GGGGTCGGTCCCTCCCGCCGTGTGGCTGGGGGTGGCTGGGGGGCTGGCTGCGGCGGGGTGGCTGCTGCTCGCGCAGCCCG
CCGGGGGGCCGACCGGGACGGGGGTGCTGGTGCCGTTCGGCTCGGTGGGGGACCTGGTCCGGCTGGGCTGCGCGGCGCTG
GCTGGCTCGCTGACGATCCTGCTCCTGCTGGCCGGCGGTGTCGCGATGGGTTCACCCCCGAAGTGGACCCGGCGGCGCGA
GTACCTGCTGCGGCTCGGGGTCGGGTGCGTGGTCGTCGTGGTCCTGCTGGTCGTGCTCTCGGATGTGGCGGGGGCTGCGG
CGGTGGTGACGGGGCAGGAAGCGCCGCCGGCGCCGGCTCCGGTGTCGAGTGCTCCGGATCTGGAGACGGTTCTGAATAAC
GCCCGGAACTGGCTGATGGGCATCCTCGCCACCGTCGCGACGTTCTTCTTCACCCTCGGTGCGACCCGGTATCTGGGTGC
GAATGGTGATCCCGGGGAGGTGGAGCGCGCGAAAGGCGCGTTCCGCAACGCCGCGATCGGCTACGGCCTCGCGGTCCTCG
CGCCGTTGGTGTTGAAGGCGTTGCGTTCGGTAGTCGGCGCCTGA

Upstream 100 bases:

>100_bases
CGCCGGGTGAGGAGCTGGCGGTGCGCCGCCGCCGCGCGGAACGAGACCTGGTTGCCGCGGTCGCGGCCCGCCGGGTCGGC
CCGGGGACCGGTGGTGGCCG

Downstream 100 bases:

>100_bases
TGCTCCGGGCAGGGCAGACGCCGCGACAGCCACGGGCGTGGGGGTGGCGGGCCGGGGTGGTCGTGTGCGTGCTGGCGGTA
GGTGCGGGTGTGCTGGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MTGRGRSLRRHTRMVVHTAGTALRRLLGSVPPAVWLGVAGGLAAAGWLLLAQPAGGPTGTGVLVPFGSVGDLVRLGCAAL
AGSLTILLLLAGGVAMGSPPKWTRRREYLLRLGVGCVVVVVLLVVLSDVAGAAAVVTGQEAPPAPAPVSSAPDLETVLNN
ARNWLMGILATVATFFFTLGATRYLGANGDPGEVERAKGAFRNAAIGYGLAVLAPLVLKALRSVVGA

Sequences:

>Translated_227_residues
MTGRGRSLRRHTRMVVHTAGTALRRLLGSVPPAVWLGVAGGLAAAGWLLLAQPAGGPTGTGVLVPFGSVGDLVRLGCAAL
AGSLTILLLLAGGVAMGSPPKWTRRREYLLRLGVGCVVVVVLLVVLSDVAGAAAVVTGQEAPPAPAPVSSAPDLETVLNN
ARNWLMGILATVATFFFTLGATRYLGANGDPGEVERAKGAFRNAAIGYGLAVLAPLVLKALRSVVGA
>Mature_226_residues
TGRGRSLRRHTRMVVHTAGTALRRLLGSVPPAVWLGVAGGLAAAGWLLLAQPAGGPTGTGVLVPFGSVGDLVRLGCAALA
GSLTILLLLAGGVAMGSPPKWTRRREYLLRLGVGCVVVVVLLVVLSDVAGAAAVVTGQEAPPAPAPVSSAPDLETVLNNA
RNWLMGILATVATFFFTLGATRYLGANGDPGEVERAKGAFRNAAIGYGLAVLAPLVLKALRSVVGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23013; Mature: 22882

Theoretical pI: Translated: 11.72; Mature: 11.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGRGRSLRRHTRMVVHTAGTALRRLLGSVPPAVWLGVAGGLAAAGWLLLAQPAGGPTGT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCC
GVLVPFGSVGDLVRLGCAALAGSLTILLLLAGGVAMGSPPKWTRRREYLLRLGVGCVVVV
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VLLVVLSDVAGAAAVVTGQEAPPAPAPVSSAPDLETVLNNARNWLMGILATVATFFFTLG
HHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATRYLGANGDPGEVERAKGAFRNAAIGYGLAVLAPLVLKALRSVVGA
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGRGRSLRRHTRMVVHTAGTALRRLLGSVPPAVWLGVAGGLAAAGWLLLAQPAGGPTGT
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCC
GVLVPFGSVGDLVRLGCAALAGSLTILLLLAGGVAMGSPPKWTRRREYLLRLGVGCVVVV
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VLLVVLSDVAGAAAVVTGQEAPPAPAPVSSAPDLETVLNNARNWLMGILATVATFFFTLG
HHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATRYLGANGDPGEVERAKGAFRNAAIGYGLAVLAPLVLKALRSVVGA
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA