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The map label for this gene is yxjL [H]

Identifier: 158318427

GI number: 158318427

Start: 8130550

End: 8131746

Strand: Direct

Name: yxjL [H]

Synonym: Franean1_6695

Alternate gene names: 158318427

Gene position: 8130550-8131746 (Clockwise)

Preceding gene: 158318426

Following gene: 158318428

Centisome position: 90.52

GC content: 71.6

Gene sequence:

>1197_bases
GTGATCCGCCTGGCCACGGTGCTGCCGGTGGGGGATGTGATCTTCCTGCTCCTCAGCGTCGGCGTCGCGGCCGCCGCGCT
GGGGTTCGCGGTGCGCATCCGCCGCGCGCAGCTGGCCGCGCTGCGCGACCGGGCCCGTCAGCTCGAGATCGAGCGAGACC
AGCGCAGCAGACTCGTGGCGGCCAGCGAGCGCGCCCGGATGGCCCGCGAGATGCACGACATCGTCGGCCACAGCCTCGCA
GTGATCATCGCGCTGGCTGACGGCGGCGCGTACGCCGTGGACGTCGCGCCCGAACGCGGCAAAGAAGCGCTCAACCTGAT
CGGCGACACCAGCCGCCGGTCGCTCGGCGAGCTGCGCCGCATCCTCGGCGTACTGCGGGAGCGTGCCGAGGCGCCCGATC
TCAGCCCGCAGCCGCGCATCGCCGATCTCGACTCGCTGTGCCGGCGCGTCCGCGCGGCCGGGCCGCAGGTTGAGTACCAG
AGCGCCGGTGAGCTCGATGCACTGGATCTCGGGGTGCAGCTGGCGGCGTACCGCATCGTCCAGGAGGCGCTCACCAACAT
CCTCAAGCACGCCGGCCCGCGCACCCGGGTGCGCATGGCGCTGCGCATCGACGGCACCCGGCTTCGGATCATGATCCGGG
ACAAACGTCTCGGCTTCCGCATGCTGCTCGAGAGCAACCCCGACACGGAGGTGGCCGGCGGCGGCCGCTCGCGCATCCTC
ATACTCACGACCTTCGATCTCGACGAGTACGTGCACGCCGCGCTTCGCGCCGGCGCCAGCGGCTTCCTGCTGAAGGACGC
CTATCCCGAGGAGCTCCTCGCCGGCATCCGGGCGGTCGCCGTCGGCGACGCGGTCATCGCACCCGCCCTCGCCAGGCGCC
TGCTCGACGCGTTCGCACAGCATCTCGGCGATGCCCTCCCGGACGGGGAGCGGGCCGCCGACCCGCGCCTGGACACGCTG
ACCGAACGGGAACGCGAGATCCTCGTCGCCATCGGCCACGGCTGGACGAACGGCGAGATCGCCGAGCGGCTGGTCCTGTC
CGAATCGACCGTCAAGACCCACGTGGGCCGCATGCTCGCGAAGATCGGCGCCCGGGACCGGGTGCAGGCCGTCATCTGTG
CCTATGACCTTGGCCTGACCCGCCCGCAGGCCCGTACCGAAACCGCCCGGGACCACGGAACCGACAATCGGCAATAA

Upstream 100 bases:

>100_bases
ACGTCGCGCTGCTGGTCGCCGTTTACAGCCTGGTGCTCCACGCGCCGCTGCGGCGCCTGCCGTGGGCGGTACCCGCGTCG
ATCGCCACGTTCTGCTGCTC

Downstream 100 bases:

>100_bases
ACGGGCGAGACAGGCCGCACGCCGCACAATTAAATTAACATCAGGTGGACGGGTATCGCCCACTCGGACCGTCAACGGAC
TCGGACCGTCAACGGACTCG

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MIRLATVLPVGDVIFLLLSVGVAAAALGFAVRIRRAQLAALRDRARQLEIERDQRSRLVAASERARMAREMHDIVGHSLA
VIIALADGGAYAVDVAPERGKEALNLIGDTSRRSLGELRRILGVLRERAEAPDLSPQPRIADLDSLCRRVRAAGPQVEYQ
SAGELDALDLGVQLAAYRIVQEALTNILKHAGPRTRVRMALRIDGTRLRIMIRDKRLGFRMLLESNPDTEVAGGGRSRIL
ILTTFDLDEYVHAALRAGASGFLLKDAYPEELLAGIRAVAVGDAVIAPALARRLLDAFAQHLGDALPDGERAADPRLDTL
TEREREILVAIGHGWTNGEIAERLVLSESTVKTHVGRMLAKIGARDRVQAVICAYDLGLTRPQARTETARDHGTDNRQ

Sequences:

>Translated_398_residues
MIRLATVLPVGDVIFLLLSVGVAAAALGFAVRIRRAQLAALRDRARQLEIERDQRSRLVAASERARMAREMHDIVGHSLA
VIIALADGGAYAVDVAPERGKEALNLIGDTSRRSLGELRRILGVLRERAEAPDLSPQPRIADLDSLCRRVRAAGPQVEYQ
SAGELDALDLGVQLAAYRIVQEALTNILKHAGPRTRVRMALRIDGTRLRIMIRDKRLGFRMLLESNPDTEVAGGGRSRIL
ILTTFDLDEYVHAALRAGASGFLLKDAYPEELLAGIRAVAVGDAVIAPALARRLLDAFAQHLGDALPDGERAADPRLDTL
TEREREILVAIGHGWTNGEIAERLVLSESTVKTHVGRMLAKIGARDRVQAVICAYDLGLTRPQARTETARDHGTDNRQ
>Mature_398_residues
MIRLATVLPVGDVIFLLLSVGVAAAALGFAVRIRRAQLAALRDRARQLEIERDQRSRLVAASERARMAREMHDIVGHSLA
VIIALADGGAYAVDVAPERGKEALNLIGDTSRRSLGELRRILGVLRERAEAPDLSPQPRIADLDSLCRRVRAAGPQVEYQ
SAGELDALDLGVQLAAYRIVQEALTNILKHAGPRTRVRMALRIDGTRLRIMIRDKRLGFRMLLESNPDTEVAGGGRSRIL
ILTTFDLDEYVHAALRAGASGFLLKDAYPEELLAGIRAVAVGDAVIAPALARRLLDAFAQHLGDALPDGERAADPRLDTL
TEREREILVAIGHGWTNGEIAERLVLSESTVKTHVGRMLAKIGARDRVQAVICAYDLGLTRPQARTETARDHGTDNRQ

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=142, Percent_Identity=38.0281690140845, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1787473, Length=139, Percent_Identity=38.1294964028777, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790102, Length=130, Percent_Identity=33.0769230769231, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 43447; Mature: 43447

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLATVLPVGDVIFLLLSVGVAAAALGFAVRIRRAQLAALRDRARQLEIERDQRSRLVA
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ASERARMAREMHDIVGHSLAVIIALADGGAYAVDVAPERGKEALNLIGDTSRRSLGELRR
HHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHH
ILGVLRERAEAPDLSPQPRIADLDSLCRRVRAAGPQVEYQSAGELDALDLGVQLAAYRIV
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QEALTNILKHAGPRTRVRMALRIDGTRLRIMIRDKRLGFRMLLESNPDTEVAGGGRSRIL
HHHHHHHHHCCCCCHHEEEEEEECCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEE
ILTTFDLDEYVHAALRAGASGFLLKDAYPEELLAGIRAVAVGDAVIAPALARRLLDAFAQ
EEEECCHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLGDALPDGERAADPRLDTLTEREREILVAIGHGWTNGEIAERLVLSESTVKTHVGRMLA
HHCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
KIGARDRVQAVICAYDLGLTRPQARTETARDHGTDNRQ
HHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIRLATVLPVGDVIFLLLSVGVAAAALGFAVRIRRAQLAALRDRARQLEIERDQRSRLVA
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ASERARMAREMHDIVGHSLAVIIALADGGAYAVDVAPERGKEALNLIGDTSRRSLGELRR
HHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHH
ILGVLRERAEAPDLSPQPRIADLDSLCRRVRAAGPQVEYQSAGELDALDLGVQLAAYRIV
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QEALTNILKHAGPRTRVRMALRIDGTRLRIMIRDKRLGFRMLLESNPDTEVAGGGRSRIL
HHHHHHHHHCCCCCHHEEEEEEECCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEE
ILTTFDLDEYVHAALRAGASGFLLKDAYPEELLAGIRAVAVGDAVIAPALARRLLDAFAQ
EEEECCHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLGDALPDGERAADPRLDTLTEREREILVAIGHGWTNGEIAERLVLSESTVKTHVGRMLA
HHCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
KIGARDRVQAVICAYDLGLTRPQARTETARDHGTDNRQ
HHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]