| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318408
Identifier: 158318408
GI number: 158318408
Start: 8105712
End: 8106602
Strand: Reverse
Name: 158318408
Synonym: Franean1_6673
Alternate gene names: NA
Gene position: 8106602-8105712 (Counterclockwise)
Preceding gene: 158318409
Following gene: 158318406
Centisome position: 90.25
GC content: 67.45
Gene sequence:
>891_bases GTGAGCGTACTGTCGCGAAGAGGCGTTTTTCTGGCGGCGCTGCTGGGAGCGGGCGGCTCCGTGGGCTGCACCACCGGTCC GGACGAGCGCCGGCCGGAGCCGGAGGTGCCCGCGGTGAATGGGCTGAGTGCCCCGGCGGCACCGCCGATGCCCCCGCACC TGCAGAGCTTCTTCGGCGAAGAGCTGATCATGCGCCGGCGGGGCGCCTTCGGCCTGTACGACGTCACCGTGGAGCTTCCG GAGGCGGGCTGTGCCTGGAAGCACATCCGGGTCCGCTATCCGAAGGGTTCGGTCAGCCAGCTCTCCGTCGAGCAGGACGG GGCCCCTTCCGGCGGTGCCCAGGTCTATCTCCAGCTTCGTGACGGTCCCGCCGACGACCTCTATCTGAGCTACCGAGTCC GGTTCCAGGATGGTTTCCAGTTCGCCAGGGGCGGCAAGCTCCCAGGATTCTTCGGTGGCACCCACGTGGCCGGCGGAAAC ACTCCGGACGGCACGAACGGATTCTCCACCCGCTACATGTGGCGGGCCGGCGGAAAAGGGCAGGTGTACGCCTATCTTCC ACGCTCGAAAGATTACGGTACGACACTCGGCCTGGGGAGCTGGAAATTCGTCCCGGGACGGTGGGCGGCCATTCAGCAGC GCGTCCGCCTGAACAGCCCGAAGCTGGCGGACGGATCGGTGACCATCTGGGTCGACGGTCGTGAGGTCTTCCACCAGGAC GGCCTTTTCTACCGCAGCACGCCGGCACTGCGTATCGAGGGCGTCTTCTTCTCCACCTTCTTCGGCGGCGATGACCTGAG CTGGGCCAGCCCCGTCGACCAGTACGCCGACTTCGCCACCTTCGTGGTCTCCGACCGGTTCATCCAGGCCGGCCCCGGCG GCTCGTGCTGA
Upstream 100 bases:
>100_bases ATTCGTGGTCCTCGCCGCCGGGGGATCGGTGCCGCGAGCCGACACGCGTAATTACCGGCGATAAGCCAGGTGGGCGGAAT GCGGGTCGGGGAGAACAGCG
Downstream 100 bases:
>100_bases TGCGGGCCGCCTGACCATGCTGACGGGCCCGCCGGCTCATGCCGATCTGGCCGGCGGGCCCGGCGCAGTTCTCGATCCAC GGCCTCGAGGTGCGATCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSVLSRRGVFLAALLGAGGSVGCTTGPDERRPEPEVPAVNGLSAPAAPPMPPHLQSFFGEELIMRRRGAFGLYDVTVELP EAGCAWKHIRVRYPKGSVSQLSVEQDGAPSGGAQVYLQLRDGPADDLYLSYRVRFQDGFQFARGGKLPGFFGGTHVAGGN TPDGTNGFSTRYMWRAGGKGQVYAYLPRSKDYGTTLGLGSWKFVPGRWAAIQQRVRLNSPKLADGSVTIWVDGREVFHQD GLFYRSTPALRIEGVFFSTFFGGDDLSWASPVDQYADFATFVVSDRFIQAGPGGSC
Sequences:
>Translated_296_residues MSVLSRRGVFLAALLGAGGSVGCTTGPDERRPEPEVPAVNGLSAPAAPPMPPHLQSFFGEELIMRRRGAFGLYDVTVELP EAGCAWKHIRVRYPKGSVSQLSVEQDGAPSGGAQVYLQLRDGPADDLYLSYRVRFQDGFQFARGGKLPGFFGGTHVAGGN TPDGTNGFSTRYMWRAGGKGQVYAYLPRSKDYGTTLGLGSWKFVPGRWAAIQQRVRLNSPKLADGSVTIWVDGREVFHQD GLFYRSTPALRIEGVFFSTFFGGDDLSWASPVDQYADFATFVVSDRFIQAGPGGSC >Mature_295_residues SVLSRRGVFLAALLGAGGSVGCTTGPDERRPEPEVPAVNGLSAPAAPPMPPHLQSFFGEELIMRRRGAFGLYDVTVELPE AGCAWKHIRVRYPKGSVSQLSVEQDGAPSGGAQVYLQLRDGPADDLYLSYRVRFQDGFQFARGGKLPGFFGGTHVAGGNT PDGTNGFSTRYMWRAGGKGQVYAYLPRSKDYGTTLGLGSWKFVPGRWAAIQQRVRLNSPKLADGSVTIWVDGREVFHQDG LFYRSTPALRIEGVFFSTFFGGDDLSWASPVDQYADFATFVVSDRFIQAGPGGSC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32033; Mature: 31902
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLSRRGVFLAALLGAGGSVGCTTGPDERRPEPEVPAVNGLSAPAAPPMPPHLQSFFGE CCCCHHCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH ELIMRRRGAFGLYDVTVELPEAGCAWKHIRVRYPKGSVSQLSVEQDGAPSGGAQVYLQLR HHHHHHCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCEEEEEEEC DGPADDLYLSYRVRFQDGFQFARGGKLPGFFGGTHVAGGNTPDGTNGFSTRYMWRAGGKG CCCCCCEEEEEEEEECCCCEECCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCCCC QVYAYLPRSKDYGTTLGLGSWKFVPGRWAAIQQRVRLNSPKLADGSVTIWVDGREVFHQD CEEEECCCCCCCCCEECCCCEEECCCHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHCC GLFYRSTPALRIEGVFFSTFFGGDDLSWASPVDQYADFATFVVSDRFIQAGPGGSC CCEEECCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHEEEECCEEECCCCCCC >Mature Secondary Structure SVLSRRGVFLAALLGAGGSVGCTTGPDERRPEPEVPAVNGLSAPAAPPMPPHLQSFFGE CCCHHCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH ELIMRRRGAFGLYDVTVELPEAGCAWKHIRVRYPKGSVSQLSVEQDGAPSGGAQVYLQLR HHHHHHCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCEEEEEEEC DGPADDLYLSYRVRFQDGFQFARGGKLPGFFGGTHVAGGNTPDGTNGFSTRYMWRAGGKG CCCCCCEEEEEEEEECCCCEECCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCCCC QVYAYLPRSKDYGTTLGLGSWKFVPGRWAAIQQRVRLNSPKLADGSVTIWVDGREVFHQD CEEEECCCCCCCCCEECCCCEEECCCHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHCC GLFYRSTPALRIEGVFFSTFFGGDDLSWASPVDQYADFATFVVSDRFIQAGPGGSC CCEEECCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHEEEECCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA