| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318362
Identifier: 158318362
GI number: 158318362
Start: 8059654
End: 8059887
Strand: Direct
Name: 158318362
Synonym: Franean1_6627
Alternate gene names: NA
Gene position: 8059654-8059887 (Clockwise)
Preceding gene: 158318361
Following gene: 158318363
Centisome position: 89.73
GC content: 70.51
Gene sequence:
>234_bases GTGCGGAACAGAACCCTGATCGCGATCGCTCGCGCCCTGGGCTGGCCCGACGACCACCTGATCCGCGTCCTGCTCTCCGG CCCCCGGGCCACAGACTACGAAGCACGTGAGCCGACGAGCGGGGAGATCCTCGCCGTCCTGGTCCGCGTCGAGGACCGCC TCACGGAGGTCCTGGCCAGGCTCGACGCCGTCAAACAGGCCGCCACCAGCTCCGACGGCCCAGCATCGTCCTGA
Upstream 100 bases:
>100_bases AGCTGGCCGATCAGCCTCGACGGCCGCAGCGTCGCGGTCGGCCAGAACCTACCGATGGGGCTGTGCCGCCGCCGGCCCCG GGTCGGCGGCCGGCCGTCGT
Downstream 100 bases:
>100_bases GACGACGAGGGCCGGACCTCGTCACGAGGTCCGGCCCCAGAGAGTTCCCGAGATGTCTGCGGGCCGAGTCAGCGGCAGTT CCGTTCTGGCGCATTACGCC
Product: putative transcriptional regulator
Products: NA
Alternate protein names: XRE Family Transcriptional Regulator
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MRNRTLIAIARALGWPDDHLIRVLLSGPRATDYEAREPTSGEILAVLVRVEDRLTEVLARLDAVKQAATSSDGPASS
Sequences:
>Translated_77_residues MRNRTLIAIARALGWPDDHLIRVLLSGPRATDYEAREPTSGEILAVLVRVEDRLTEVLARLDAVKQAATSSDGPASS >Mature_77_residues MRNRTLIAIARALGWPDDHLIRVLLSGPRATDYEAREPTSGEILAVLVRVEDRLTEVLARLDAVKQAATSSDGPASS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8354; Mature: 8354
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNRTLIAIARALGWPDDHLIRVLLSGPRATDYEAREPTSGEILAVLVRVEDRLTEVLAR CCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LDAVKQAATSSDGPASS HHHHHHHHCCCCCCCCC >Mature Secondary Structure MRNRTLIAIARALGWPDDHLIRVLLSGPRATDYEAREPTSGEILAVLVRVEDRLTEVLAR CCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LDAVKQAATSSDGPASS HHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA